Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <---------KAN4(2)            <---------ANAC58            ----------->GT1            <------MYB46(1)            <---------ANAC58            <---------ANAC46            <------MYB83           <---------MYB46(3)                                                             <---------ARR14(2)           --------->MYB59                <---------AtLEC2                                --------->ARR14(2)       <-----------RAV1(1)            <-------GAMYB                              <----------DOF2      --------->ICU4       <---------MYB52(1)                                    <---------DAG2 --------->ANAC58         <-------GAMYB   <---------ANAC46                    --------->ARR11(3) --------->ANAC58  --------->MYB46(3)<---------MYB46(3)          <---------WOX13(1)       ------->TEIL --------->ANAC55(1)     <-----------RAV1(1)      --------->GLK1(2)           <---------ARR11(3) --------->ANAC46<-----------GT1    <---------AtMYB61   --------->ZAT6    ---------->DOF2<---------CCA1(2)   tacaagtaattgttgggtataaccactctgttgttcttgtggttgcatagagcatctagcactagagattgacattaaaagagctttttctgtatctcca  10307700                                                                          ----------->RAV1(2)                                                                       --------->ANAC58                                                                       --------->ANAC46                                                                       --------->DEAR3(1)                                                                       ------->GAMYB                                                                       --------->ANAC58                                                               <------MYB46(1)                                                           --------->ATHB12                                                          <---------YAB1------>NtERF2              --                                  --------->ANAC58      --------->O2  <---------MYB55(2)           <-                                  --------->ANAC46      <---------O2  --------->MYB46(3)          ---                          <---------ARR11(3)        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <--                          --------->ARR11(3)      --------->ANAC58    --------->DEAR3(1)          <--                          <---------ARR14(2)     --------->SPL7<------MYB83<----------CDC5        <--                          <---------GLK1(2)     --------->MYB52(1)<---------ZAT18 --------->RAP2.6(2)                          --------->ARR14(2)   <---------SPL7<---------WOX13(1) ------>NtERF2     ---                        ----------->ARR10    <---------------AtSPL3<---------ALFIN1<------NtERF2 ----              --------->AHL20(2)  --------->ANAC58--------->ANAC58<---------WRKY38(1)            <---   tccattcttcgttcgataaatttgatgagatactccaagaaaaccgagtcgaacggcaacgtgattggtccacccgccctgaggccgaactcttcttcag  10307800          <---------ARR11(3)          --------->ARR11(3)        <---------ARR11(3) ------->ARR11(3) --------ARR11(3)                               --------->DAG2           --------->REM1(2) ------>GLK1(1)                             ------->GAMYB  <---------ARR14(2) -------RVE1(1)                  --------->ANAC58          --------->ARR14(2)    --------->ANAC58 -------CCA1(1)                  --------->ANAC58--------->ANAC58     ------->GAMYB   --------->MYB46(3) -------GLK1(1)                  --------->ANAC46--------->ANAC58 --------->MYB46(3) ---------->DOF2 ------>RVE1(1)                  --------->ANAC55(2)---------->DOF2 <---------At5g28300 ----->ARR11(3)            <---------MYB46(3)  ---------->DOF2<---------AHL20(2) --------->ANAC46  -- ------ARR11(3) --------->HSFB2a(2)      --------->MYB52(1)<-----------ARR10     --------->ANAC58<---   atatcttcaagagctcttcgaaaacagagttgttcaagtaacttaacggaaaagcaaagcggattttatcaaccgtgtaaaccacgaaacagcccttctc  10307900              --------------->AGL15                                                      <----------DOF2         <---------At4g35610                                                         <---------At4g35610         <---------ZAT2                                                   ------>ZmHOX2a(1)<---------         --------->At4g35610                                            <-----------------AGL1    --------->At4g35610                                          --------->GLK1(2)   --------->At4g35610 <---------At4g35610                                =============================HOX2a_HOX2a -------- --------->ZAT14                                    ------>ZmHOX2a(2)   ----------------->AGL1 <---------ZAT14                                  --------->ARR11(3)   ---------->ID1<------NtERF2 ------->ANAC46                                   <---------ARR11(3)<----------DOF2  <---------ZAT2 ------ALFIN1 <---------------AGL15          <---------MYB46(3) <---------GLK1(2)  <XXXXXXXXXXXXXXXXX   cacagcagttgagctgctagtagtagtagtagtagtagtagtagtagtagttgatctttggaatgagattcttttcctcttgagggcagctctttgttgc  10308000  <---------ANAC58  <---------ANAC58                     <----------DOF2 --RAV1(1)                            <---------ICU4                      ----------->GT1  <---------ZAT6 -->ID1                              <---------YAB1                --------->DAG2     <---------REM1(1) XXXMIR399B/C               <---------ZAT6        ---------->DOF2 ---------->DOF2  <-----------RAV1(1)   catttcttggccatcttgagtagtttcttagtgttgatcatctttactaatagaaagagagcaaacaaaaaagggattgtaagttgtgttgtagtataaa  10308100                                                             ---------->DOF2                        -                                                        <-----------TBP                             -                ----------->GT1                      <---------AHL20(2)                 --------->AHL20(2)               --------->ALFIN1                     <-----------TBP   --------->ICU4    <---------YAB1           ---------->DOF2   *TSS             ---------->ID1<---------AHL20(2)          <---------AHL20(2)         <---------YAB1--------->YAB1       <-----------RAV1(1)    ---------->DOF2    --------->CCA1(2)  --------->ZAT14     --------->ICU4      <----------DOF2 ----------->TBP           <<<<<<<<<RAP2.2 -   tctctgaagtaatgaaagtggtgaatgatgaagaatgctctaagctttgttgcattttatatataaagagaaagtattagagttttagatataattaaga  10308200                                                                      <---------ARR14(2)                                                                      --------->ARR14(2)   ---------->DOF2                               ----------------->AGL2   --------->At4g35610  ------->GAMYB                                 --------->PCF5       <---------CCA1(2) --------->MYB46(3) ------->MYC3         ---------->DOF2           --------->YAB1 -------->ANAC58    <-------MYC3  <---------ANAC58                <---------ATHB12 ------->P          ------->MYC2  <---------ANAC58              --------->WOX13(1) -------->ANAC58    <-------MYC2--------->ARR11(3)            <---------ATHB12  <---------ATHB12   gcaaccaaagaagacagaaacacatgctcttgtagttcttgtctaaagaggtcccaaactagtaatcaatcatatctgctaaatcaatttgtggattaga  10308300                                                                                          ------>ZmHOX2a(1)                                                                                      <---------PCF2                                                                                      <---------TCP16(1)                                                                                      <---------ARR14(2)                                                                                      --------->ARR14(2)                                                                                    --------->LBD16                                                                                   <---------ANAC58                                                                                   <---------ANAC46                                                                                   <---------ANAC58                                                                                  <---------LBD16                               --------->ALFIN1           --------->ARR11(3)      <-------TEIL                              <-------MYC3            ---------->DOF2            --------->CCA1(2)                              ------->MYC3  <---------ATHB12                    --------->ARR11(1)                     <---------ICU4      <---------AHL20(2)            ---------->DOF2<---------PCF5                     --------->YAB1     --------->AHL20(2)<---------ARR11(3)---------->DOF2   <------   aaccattaacatggtgagaagaaacatgaccatgtgggggtattaaatcaatgttacaaagacatttgaaggtgaaagaaaagatgcgggtcctctcatg  10308400                                                                    ------>MYB83                                                                    ------>MYB46(1)                                                                    --------->MYB52(1)              <                                                        <---------AHL20(2)                          -                                                       <---------AHL20(2)                     -------                                                       --------->AHL20(2)                     -------                  --------->TOE2(3)                --------->AHL20(2)                      --------->At4g35610       ----------->GT1                             <---------AHL20(2)     ------->TEIL     <---------At4g35610 ---TOE1(2)       --------->TOE1(3)         --------->MYB52(1)    <---------MYB59  --------------->AGL15   ttctcagagatgtaaaaaaaccttaaacctagagaaatttttggaataccggtttaattaaatgtaaaccgaactgaaccgaaaacccttattagctacc  10308500                             ------------>CBF                           ----------->HVH21                         <---------At4g35610                         --------->At4g35610  <---------At4g35610   <---------DEAR3(1)  --------->At4g35610  <------NtERF2                                                        <-------- ---------ZAT14       <-----------HVH21                                          <---------YAB1  <--- -------->ZAT14      --------->DEAR3(1)                                         --------->ARR11(3) -->MYB52(1)    ---------->DOF2                             *TSS                <---------ARR11(3) ->P         ----------->TBP------>NtERF2<------ZmHOX2a(1)------>ZmHOX2a(1)--------->ICU4   ---------   tgtgaactgcctcttatataaagccgtcgctgacaatctcataggagactcgagagagtcctaaactttcaaaactagtgattatcttcgagtcatgtca  10308600  Previous    Next  AGI:  At1g29460.1    Description:  auxin-responsive protein, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29440.1); similar to auxin-induced protein [Brassica rapa] (GB:ABV89641.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 10307493    to: 10308129    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g29465.1    Description:  unknown protein Range:  from: 10308560    to: 10309784    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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