Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <----------DOF2                                        <---------WOX13(1)                               --------->ZAT6           <---------DAG2      ---------->DOF2    --------->ARR11(3)        ---------->DOF2                                 --   tgtagtttcaaagagcattgggaagaacatctagcactagagattgacattaacaaagccttttctgtgtctgcatccattcgtctttggaccaatttga  10306100                                                                                     --------->ARR11(3)                                                                            ------>ZmHOX2a(2)                                                                           <------ZmHOX2a(2)         --------->ANAC58                      <---------ZAT2             --------->AGP1         --------->ANAC46                  ----------->RAV1(1)            --------->ARR14(2)         --------->ANAC58                <-------TEIL                     <---------ARR14(2) <---------ARR11(3)                     --------->TCP16(2)                <---------ARR11(3) --------->ARR11(3)                   <------MYB46(1)                     --------->ARR11(3) --------->ARR14(2)                   <------MYB83                        --------->ARR14(3) <---------GLK1(2)                   --------->MYB59                      <---------ARR14(3) <---------ARR14(2)              ----------->HVH21                       <---------GLK1(1) --------->ARR10                 <---------YAB1--------->ZAT2            --------->GLK1(1)   tgagatactccaagaaaactgaatcgaatggcgatgtgataggtccaccagttgggaggccaaactcttcttcagagatcttcaagagttcttggaaaac  10306200                               <---------ANAC58                               <---------ANAC58                        --------->ANAC58                                            <---------At4g35610                        --------->ANAC58                                        --------->ALFIN1                      ---------->DOF2        <---------ANAC58                 <---------MYB46(3)                   --------->LBD16           <---------ANAC46               <---------At4g35610                 <---------At4g35610--------->At4g35610                  --------->ZAT2                 --------->At4g35610<---------At4g35610                  --------->ZAT14                 <---------LBD16  --------->ZAT18                        <---------At4g35610                --------->MYB52(1)<---------ZAT14       --------->ANAC46 --------->At4g35610        --------->ANAC55(2)    <---------ANAC46       --------->TOE2(3)  <---------ZAT2        ----------->GT1--------->DAG2        <---------ANAC58  -------->P<---------ZAT14      <-----------RAV1(2)  ---------->DOF2<-----------RAV1(1)--------->MYB46(3)<-------GAMYB---------   agagttactcaggtaacttagcggaaaagcaaagcgtgtgctgtctgtcgtgtaaaccacaaaacaacccttctctgcagcggttgagctagtagcacta  10306300                 ===============HOX2a_HOX2a                 ------>ZmHOX2a(2)                ================HOX2a_HOX2a                <------ZmHOX2a(2)               --------->AGP1               <---------ARR14(2)               --------->ARR11(3)               --------->ARR14(2)               <---------ARR11(3)              <---------GLK1(1)              --------->GLK1(1)                                                                   ===    <----------DOF2        --------->ALFIN1                                                       <--   =============================HOX2a_HOX2a                                                       ===   =======================HOX2a_HOX2a   <----------DOF2                                          ----   ------>ZmHOX2a(2)     ------>ZmHOX2a(1)<-----------RAV1(1)           <----------DOF2        <----- <---------ARR11(3)------>ZmHOX2a(1)  <----------DOF2                   <---------DAG2     <--------- --------->ARR11(3)<----------DOF2  <---------At4g35610          --------->ATHB12     <---------ICU4 >ZAT6       ----------->ARR10    <---------DEAR3(1)            <---------YAB1       <---------YAB1   cttgatctttgaaatgagatccttttcctgtggagggctgctctttgttgccacttcttggccatcttgattagcttttttgtgttcatcattcttttca  10306400                  ---------->DOF2               ====================HOX2a_HOX2a              <------ZmHOX2a(2)              =====================HOX2a_HOX2a              --------->CCA1(2)             <---------ARR14(2)             <---------ARR11(3)    --------->AHL20(1)    --------->ARR11(3)    <---------AHL20(1)                                                            --------->KAN4(2)  <---------AHL20(1)                                                              --------->ARR14(2)  --------->ARR11(3)                                                            ----------->ARR10  <---------ARR11(3)                           --------->HSFB2a(2)         <------MYB83  --------->AHL20(1) --------->At4g35610       <---------HSFB2a(2)         <------MYB46(1) ====================HOX2a_HOX2a             <---------ANAC46            <---------WOX13(1) ----ZmHOX2a(1)------>ZmHOX2a(2)          <-----------RAV1(1)          --------->ATHB12 =====================HOX2a_HOX2a   <-----------GT1                   <---------YAB1         <------- ----->LBD16 <---------AGP1 <------ZmHOX2a(1)<---------REM1(1)   --------->ANAC58 <---------ARR14(2) ----LBD16   --------->ARR14(2)<---------ARR11(3)                --------->ANAC58 <---------GLK1(2) -DOF2      <---------GLK1(1)  --------->ARR11(3)      <----------DOF2--------->ICU4 *TSS    <-------   ggaaaatattttgtagatccgaaagcagaaggagattttaacttgtgttgtagaactctttgaatgcaagttatgattggtgaagattcccacaggcttg  10306500                                                                     <---------ANAC46                                          ------>MYB83               <---------ANAC58                                          --------->ANAC58           <---------ANAC58                                          ------>MYB46(1)     <-----------RAV1(2)                        <------------CBF  --------->ANAC58 --------->ANAC58                       -------->ATHB1     --------->ANAC46 --------->ANAC58                       --------->YAB1   ------->GAMYB      --------->ANAC46     ----------->TBP   --------->ATHB51--------->MYB46(3) <-------MYC3   --------->AHL20(2) <---------YAB1  --------->ANAC58    ------->MYC3           --------->YAB1 --ANAC58    <------ZmHOX2a(1)        -------->P          <-------MYC2          <---------YAB1 --ANAC58   ----------->GT1           --------->ANAC58    ------->MYC2       <---------ZAT6   tttcattatatataaggagaaactattattgttttagagcaaccaagccagacagaaacacatgccaggtttcttgttagtgatcataagggtcccaagt  10306600        --------->TOE2(3)        --------->YAB1     --------->WOX13(1)   <---------ATHB12                                                                       --------->YAB1  --------->ANAC58                                                                  ----------->GT1  --------->ANAC58                                                           <---------YAB1       <-- --------->WOX13(1)<---------ATHB12     <-------TEIL           ----------->HVH21------->TEIL   <-----   tagcaatcaatcttatttcaaatcaacttgtggattaaaacatacatggtgagaactgagaagacatgaccatgtgagtatgaatcttgtaataagaacg  10306700                                                                           --------->RVE1(1)                                                   <----------DOF2        <---------ARR11(3)                                              <-----------GT1             --------->ARR11(3)      <-----------GT1                      --------->YAB1           ----------->GT1    <-----------HVH21  ---------->DOF2     --------->AHL20(2)  --------->LBD16 -----TEIL     <---------At4g35610      --------->WOX13(1)    <-----------RAV1(2) ----HSFB2a(1) --------->At4g35610     <---------AHL20(2)     <---------LBD16      ----------->RAV1(2)   ttcatatgtcacgatttagctgatacaaaggcattcaatattcaattaaaaccctttgatgttcccagggaagtaaaatctcttaacctgcagaaacttc  10306800                                                                                                <----       --------->MYB52(1)                                <---------ZAT14              <----------DOF2      ------>ZmHOX2a(1)    --------->AHL20(2)       <---------ZAT18                   <---------DAG2  <---------ARR14(2)    --------->YAB1              --------->ZAT18            <---------YAB1  ------  --------->ARR14(2)  <---------YAB1       <---------ATHB12              --------->ALFIN1    ------->TEIL   aacggttcctaagggtctcaacttattaataaactatgtctgcaaatcaacttgtggactatacaacttcttcatgtgggtatgaatactttatgaacct  10306900                       --------->AHL20(1)                       <---------AHL20(2)                       <---------AHL20(1)                      --------->AHL20(2)                      --------->YAB1             --------------->AtSPL3             --------------->AtSPL8             <---------------AtSPL8          --------->CCA1(2)                                     --------->YAB1         <---------ARR11(3)                                     --------->ANAC55(2)         --------->ARR11(3)                        <-------GAMYB--------->ANAC46  ----------->HVH21  <---------YAB1             <---------ZAT2 <-------TEIL                         < ------DOF2  --------->MYB59                    --------->At4g35610                          -------- --->TOE2(3) <---------TOE2(3)                  <---------At4g35610   --------->YAB1         --------   ttatatgacaagatttaggtactattatattgatggagaatgcaagaggctgctgttacagtatatacataatgagaacttatacattacaagagaagcc  10307000  Previous    Next  AGI:  At1g29450.1    Description:  auxin-responsive protein, putative. similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT1G29500.1); similar to auxin-induced protein [Brassica rapa] (GB:ABV89641.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 10305937    to: 10306485    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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