Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------GLK1(2)                                                              <-----------------AGL2                                                              ----------------->AGL3                                                       ---------->DOF2                    --------->GLK1(2)               --------->ANAC58              --------->ANAC46                 --------->ANAC58   --------->ARR14(2)       --------->MYB46(3)                      --------->ANAC58   <---------ARR14(2) -------->DOF2--------->ANAC58               ---------->DOF2<-----------GT1                        == ->LBD16      --------->ANAC58        --------->AHL20(2)--------->DAG2                      --------- ->ANAC46 <---------ALFIN1      --------->TOE2(3)   --------->ANAC58       <---------ARR14(2)      <-   acaaagagaaccacacacacaaattctagtgaaatctcaataaaaccaaaagccaagaaaagtaaccagatttggaggttttggagaaattcagagctct  10299600                           ------>ZmHOX2a(1)                      --------->KAN4(2)                     --------->KAN4(1)                     <---------KAN4(1)                     <---------HSFB2a(1)                     --------->GLK1(1)                     --------->HSFB2a(1)                     <----------TaMYB80                    <---------KAN4(2)                    --------->ARR11(3)                    --------->ARR14(2)                    ---------->TaMYB80                    <---------ARR14(2)             =====================HOX2a_HOX2a             =============HOX2a_HOX2a             =========================HOX2a_HOX2a             <------ZmHOX2a(2)            <---------ARR11(3)       --------->ALFIN1    --------->LBD16                            ---------->DOF2    <---------AtMYB61<---------GLK1(1)      <---------ANAC58  ------>ZmHOX2a(2) --------->ALFIN1   <---------ARR11(3)      <---------ANAC58--------->ARR11(3)                   ---- ===================HOX2a_HOX2a  ---------->DOF2            <---------ARR11(3)             ---------- >GLK1(1)  <---------GLK1(1)   <------ZmHOX2a(1)        --------->At4g35610         <---------TOE2(3) -----ZmHOX2a(1)   <------ZmHOX2a(1)    ---------->DOF2 <---------At4g35610   <---------YAB1     ----   aggatggaggtggagatcagaggatattcctgaggaaaagaagaaagcttgtttcatcaactgatcttagaataaagcttactattaagaaaacaacaca  10299700                                                                    <---------AHL20(2)                                                                    <---------YAB1  --------->YAB1                                                                   --------->AHL20(1)                    ------->GAMYB                                  --------->AHL20(2)  --------->ZAT6                  --------->ANAC58                        --------->YAB1           <------ZmHOX2a(2)                  --------->ANAC58                      --------->AtLEC2           ==================         <-----------GT1                                --------->ANAC58       --------->ALFIN1 ----->ANAC58--------->ANAC46                           --------->ANAC46    --------->DAG2        <-- ->RAV1(1)   --------->ANAC58              --------->At4g35610     <---------AHL20(1) <---------YAB1< ----->ANAC58--------->ANAC58------>ZmHOX2a(1)          --------->ANAC58   ---------->DOF2 ----------   agctctgaattttacaagacaaccaagtttcctattagtacaagaagatgacattgacaagcaaaacaatataatagaaaagtggatcatcactaaagca  10299800              --------->GLK1(1)              <---------GLK1(1)                                                                   ---         <---------LBD16                                                                        -----         --------->At4g35610                              --------->ANAC46                   --------  --------->ATHB12                                     <-------TEIL                    --------->LBD16 ====HOX2a_HOX2a                                ----------->GT1                      --------->LBD16 ----ZmHOX2a(1)                             <----------DOF2                          <---------LBD16 ---------WOX13(1)                       --------->ARR11(3)           <---------At4g35610  ---------- >DOF2   <---------At4g35610             <---------ARR11(3)           --------->At4g35610---------->DOF2   ggattgatagcagcggaattcacaactagaaaactctatttaagctctttgagtaaatacatggaacaagttatctgcatttctatccccagaaagaaaa  10299900                                                    --------->GLK1(1)                    ----------->RAV1(2)                                                   <---------ARR14(2)                    <---------At4g35610                                            --------->ARR11(3)                           <---------ZAT2                                        --------->At4g35610                              --------->At4g35610                                        <---------At4g35610                            <---------WRKY12       --------->ETT(2)               <-----------RAV1(2)    --------->LBD16           <-----------RAV1(2) ------>YAB1                     --------->GLK1(1) --------->ARR14(2)                <-----------HVH21 ---->AHL20(2)            <-----------RAV1(1)<---------GLK1(1)              <---------TGA1a*TSS ->AHL20(2) --------->At4g35610  <---------GLK1(1) <---------GLK1(2)        <---------O2 --------->ZAT2 ->GT1 <---------ETT(2)   ========================RAV   <-----------GT1  <----------ID1<---------WRKY38(1)   taatacctgtagacatctcaatttgacactgttggaaatctcagatgatatcggattttctcccgtcgatgaaatgagacgagagagggtcagctgagtt  10300000                                                            <----------DOF2        <------------CBF                                                           <---------DAG2       --------->AHL20(2)            --------->MYB46(3)    ===================HOX2a_HOX2a                <---------AHL20(2)          ----------->RAV1(1)     <------ZmHOX2a(1)        <----------DOF2    --------->CCA1(2)  ----    <---------------AtSPL8    ------->GAMYB         --------->ATHB12 --------->AHL20(2)       -------    --------------->AtSPL8 ----------->RAV1(1)<------ZmHOX2a(2)      <---------AHL20(2)      <-------   tttgtttttgtacaacaaatggttttgtacaacagaggaagagagacgatcgaattatgggccttttggattttatttggatataaattgggcctataat  10300100                                    --------->TOE1(3)                      <---------MYB46(3)                        --------------->AGL15                     --------->ALFIN1                      <---------At4g35610  --------->TOE2(3) ----->AHL20(2)      <---------ANAC46        --------->TOE2(2)  <---------------AGL15 -->YAB1       --------->DAG2       --------->TOE2(3)   <---------At4g35610     --------->TOE1(3) --- --YAB1       ---------->DOF2    --------->GLK1(1)<------ZmHOX2a(1)  ---------->DOF2      ------>ZmHOX2a(1)   aaactaggcccatatataaagcggtgggaagagagaaaccctaaaaacctaaggagtcttctgcttctatataaagcctaaaccctaacctcctcttcat  10300200                                                                          <------MYB83                                                                          <------MYB46(1)                                                                      <---------MYB46(3)                                                                      <-----------RAV1(1)                                                                     ----------------------->TaNAC69(2)             ------>NtERF2                                       <---------ANAC55(1)         --------->ETT(2)                                        <---------ANAC55(2)     <---------AHL20(2)                                          <------MYB46(1)  <---------AHL20(2)                                             <------MYB83  --------->AHL20(2)                                             --------->ANAC55(2)  <---------AHL20(1)                                             <---------ANAC46  --------->AHL20(1)                                            --------->MYB59 --------->AHL20(2)                <-----------GT1              --------->MYB111(1)                 - <---------ATHB12    ---------->DOF2                    ----------->GT1  <---------AtMYB61    <------ ------------------>WRI1    <---------YAB1      <---------MYB52(1) --------->ALFIN1       <---------ANAC46   ccaataaattatcgacggccaaataaagttttgatttttatctctcattcggtagatttagtgaattaggtgttgttggtgtctatgcttcttcgtatag  10300300                                                                  <-----------RAV1(2)                                                                  <---------ALFIN1                                                               <------NtERF2                                                           <-----------HVH21                                                  --------->CCA1(2)               --------->YAB1              xxxxxxxxxxxxxxxxx>smallRNA(fl3)  --------->ARR11(3)                    ---------->DOF2   ====================RAV  <---------GLK1(2)                    <------ZmHOX2a(1)  <-----------RAV1(1)                <-------GAMYB ---------->ARR10           <---------TOE2(3)  <---------YAB1 ------>NtERF2                 <-------- ---CCA1(2)    --------->ANAC55(2)   <---------TOE2(3)<---------AHL20(2)                <---------YAB1   cttagattttgttattttcgtaattcgtttaatgtttttgaggaaagtgatgatatgaaattgtcgccccaggcttaatctgcatccattacgatggttg  10300400                                                                            <---------YAB1                                                                          xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                  <---------ANAC58        <---------WOX13(1)                                        <---------ANAC58        <---------ATHB51      <---------MYB46(3)                                          <---------ANAC46        --------->ICU4      --------->ATHB12                                       <---------MYB46(3)           <---------ATHB12     <---------YAB1      <---------GLK1(2)  --------->YAB1--------->YAB1  --------->CCA1(2) <--------    xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            <---------YAB1   xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          --------->YAB1    <---------ARR14(2)<---------ICU4    xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------YAB1<---------YAB1xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxx>smallRNA(i)              <---------YAB1--------->ICU4  --------->ARR14(2)--------->YAB1 -MYB46(3)     <---------YAB1        ----------->GT1----------->GT1 <---------AtLEC2 ----------->GT1-   taacatggtgattgactatttttgtctgattctctcaaatcgtttattatgattctgttataatggttgtgtatggatatgatgaaatggcaataatgtt  10300500  Previous    Next  AGI:  At1g29410.1    Description:  PAI3 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 3); phosphoribosylanthranilate isomerase. similar to PAI1 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 1) [Arabidopsis thaliana] (TAIR:AT1G07780.4); similar to unnamed protein product [Vitis vinifera] (GB:CAO41379.1); contains InterPro domain Ribulose-phosphate binding barrel; (InterPro:IPR011060); contains InterPro domain N-(5' (InterPro:IPR001240); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785) Range:  from: 10298356    to: 10299991    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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