Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ANAC55(1)             --------->ANAC55(2)             <---------ANAC46             <---------AHL20(2)             <---------ANAC55(2)    --------->YAB1            <-------TEIL       <---------ARR14(2)            --------->AHL20(1)       <---------TOE2(3)       --------->ARR14(2)           --------->AHL20(2)  <---------ARR11(1)           <---------GLK1(2)   <---------At4g35610  ------->TEIL                 <---------ARR11(3)--------->HSFB2a(2)                  <---------AHL20(2)  --------->GLK1(2)            --------->ARR11(3)<---------HSFB2a(2)   --------->ALFIN1     <--------  <-----------ARR10        --------->ANAC46<---------AHL20(1)--------->AHL20(2)       --------->AHL20(2) <---------ARR14(1)        --------->ANAC58--------->ARR11(3)<---------AHL20(2)   <---------AHL20(2) ->GT1--------->MYB52(1)   --------->ANAC58--------->AHL20(1)<---------AHL20(1)   --------->AHL20(2)   atcgaatctaacgatacgtatgaaaatacacgagatactcataaatattttgcagaagagcattaaattacaagtgcgactaatttaaataaatacgata  10264000                                                                       --------->ANAC55(2)                                              --------->YAB1           <---------ANAC55(2)                                              <---------AHL20(2)    <---------MYB52(1)           --------->ANAC46             ----------->GT1   --------->GLK1(2)        --------->ANAC46            --------->GLK1(2)  ----------->ARR10                    ---------        <---------ETT(1)      <----------ID1  --------->AHL20(2)   <-----------HVH21        <-------- -YAB1<-----------GT1       ---------->DOF2--------->YAB1<---------GLK1(2)                  <--------   gcatatttttccgacacaactaaaccaaaaaaaagacaaatctagtaataaaaagattagattctaatccgttacatattgccagtagtattgactttta  10264100                                               ----------->HVH21                                     --------->AHL20(2)                                    --------->AHL20(2)                                --------->AHL20(2)                           ----------->GT1  <---------ARR11(3)         <---------GLK1(2)        ----- ------>AGL15            ----------->GT1    --------->GLK1(2) <---------ARR14(2)             -------- -------AGL15       --------->HSFB2a(2)    --------->RVE1(1)  --------->GLK1(2)         <-------TEIL --DOF2             <---------HSFB2a(2)  --------->AHL20(2)   --------->ARR14(2)<---------DAG2  <----   ctgggaaaaacaaaaaaactttcgagagagagaaaaaaataaaaaaaatctgacaacgaagacaaatctgaaaaattctcagcctttcgattcattcata  10264200                                                                                                   <-                                                                                                   --                                              <---------YAB1                                       --     <---------ANAC46                   ---------->DOF2                 <----------DOF2      <-------     --------->ANAC55(2)              --------->LBD16                   <---------DAG2   <----------DOF2     <---------ANAC55(2)             --------->HSFB2a(2)           <-----------GT1       <---------DAG2  --------->ARR14(2)                 <---------HSFB2a(2)       <----------DOF2     ------>ZmHOX2a(1) ---->ARR14(2)     <<<<<<<<<TBF1    --------------------->WRI1 <---------DAG2      <---------At4g35610 ->YAB1      <<<<<<<<<TBF1          <---------LBD16     --------->ARR11(3)         --------->At4g35610 -----ARR14(2)  <<<<<<<<<TBF1   <----------DOF2        --------->YAB1<-----------GT1 ----------->HVH21   tacgattacgcgttcttcttcttcttccttctctctttcccagaaagtatcatcgaaagataacccttttttcacttttcttctcctctgacttttttct  10264300      <----------DOF2   ------->TEIL   --------->GLK1(2)   --------->ARR14(2)   <---------ARR11(1)   <---------ARR14(2)                              <---------TOE2(3)  <---------ARR14(1)                             ---------->DOF2  <---------CCA1(2)                           --------->YAB1 --------HSFB2a(2)                           <---------AHL20(2) ------->HSFB2a(2)       --------->GLK1(2)  --------->AHL20(2)                                      < ------->HSFC1(1)       <---------GLK1(2)<-----------TBP             ------>ZmHOX2a(2)       <------- ----GT1       <---------ANAC46      <---------ANAC46          <-----------GT1   *TSS    <----------DOF2   tctcgaatctttagttttcgtttatagattctgttttcttcgtatatataataaaggtttgattttttcgatctgagagcaagagaaaaccctttccatg  10264400                                                                                  --------->ATERF1(1)                                                                                  <------NtERF2                                                                                 <---------ATERF1(1)                                                                                 <-----------HVH21                                                                                 ------>NtERF2                                                                                <---------O2                                                                                --------->O2                                                                              --------->LBD16                                                                              ------>NtERF2                                                                             <---------LBD16                                                                            <---------LBD16                                            <----------DOF2             <---------DAG2                                     ------>ZmHOX2a(2)               <---------WRKY18(1)                                    <------ZmHOX2a(2)               ----------->HVH21                                   <---------ARR11(3)               --------->WRKY12      <------NtERF2                --------->ARR11(3)               --------->WRKY38(1)    <---------DEAR3(1)             <---------ARR14(2)               --------->WRKY45   --------->At4g35610             --------->ARR14(2)              <---------MYB52(1)<---------ALFIN1   <---------At4g35610            <---------GLK1(1)               --------------------->WRI1 <-----------RAV1(2)      <---------LBD16------>NtERF2            <-------GAMYB <---------DEAR3(1) ---------->CDC5     <---------MYB52(1) --------->DEAR3(1)      <------NtERF2<---------RAP2.6(2) ------NtERF2      <---------ICU4 --------->GLK1(1)           --------->DEAR3(1)--------->DEAR3(1) --AtLEC2      <---------YAB1   <------ZmHOX2a(1)       --------->TOE2(3)<----------DOF2   gcctcagcggcgatattctcatcgttacgacggaggagatcgccgtctttggaagcattcttagcccccgttgacctttccggcgtcgcacttgttcaaa  10264500                                                                                                  <--                                                                                                 ----                                                                                                <----                                                                                               ------                           <---------ANAC58                                                    <-----                           <---------ANAC58                        <---------HSFB2a(1)         ------                           <---------ANAC46                        --------->HSFB2a(1)         ------                     <--------P                                --------->ANAC58                ------                    <-------GAMYB                           ------->GAMYB                      <-----                   <---------MYB46(3)                      --------->ANAC46               <------ZmHOX2a(2)                  <---------TOE1(2)                        --------->ANAC58              --------->ARR11(3)                  <---------TOE2(2)           <---------GLK1(2)--------->ANAC58       <---------TOE1(2)              <---------LBD16     <-----------GT1          --------->ANAC58 <----------DOF2    <-----   ccctagcttcaatctcttcggaggttgtttcttgtttcacctctgttcgattctcgtttcaacgcaagaacgctcgttctttgattcgtaagatcgagat  10264600       <---------YAB1   <---------ANAC58   <---------ANAC58   <---------ANAC46  ---------->ID1 --------DOF2 -->ZmHOX2a(2) --ZmHOX2a(2) --->ARR14(3) ----ARR14(3)                     --------->ALFIN1 --->ARR14(2)               <-------TEIL --->AGP1               <---------TOE2(2)                                    ---------->DOF2 --->ARR11(3)           <---------TOE1(2)                                --------->ANAC58 ----ARR14(2)       --------->HSFB2a(2)                                  --------->ANAC58 ----ARR11(3)       <---------HSFB2a(2)     --------->MYB46(3)       >>>>>>>>>TBF1   ctttgtcgtattattcgaatttctcgtagattcaaattggggctcaacaacaacaagaacaagagcaagaagaagaagcaaaagctctgtttctgaatca  10264700                                                                --------->ZAT14                                                                <---------ZAT14                                                                --------->ZAT18                                                                <---------ZAT18                                                            XXXXXXXXXXXXXXXXXXXXX>MIR833-5P                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                   <---------ARR11(3)           <---------GLK1(2)               ---------->DOF2                  <---------ARR11(3)           ---------->ID1                       --------->ARR14(2)       <----------DOF2   <---------ARR11(3)     --------->ARR14(3)      <---------ANAC58<----------DOF2           <---------ARR14(3)      <---------ANAC58<---------DAG2            <---------ARR14(2)  <----------DOF2  --------->ARR11(3)           --------->ARR11(3)--------->At4g35610         <------   acagctttgctttgtctcaaagagctttatcttcttctctatcgttccaagatccttgttgattactgcgctcaatctagtaagttatggctcttgttac  10264800                                         --------->HSFB2a(1)                                         <---------HSFC1(2)                  ------>ZmHOX2a(2)                                         --------->HSFC1(2)                --------->ARR11(3)                                         <---------HSFB2a(1)               <---------ARR11(3)                                       <---------ARR11(3)                 --------->YAB1                   --------->GLK1(1) --------->ANAC58                    <---------ATHB12            <---------LBD16          --------->ANAC58          <-----------GT1 -----GT1<---------GLK1(1)--------->ATHB12         <----------DOF2  <-----------HVH21      ----------   aaaacccttcgatttctgggtatttccatgatttgaatcaagaaatttcgactcttttggatgttttacctgtcaatgatcttggtctaagcgatgacat  10264900  Previous    Next  AGI:  At1g29340.1    Description:  PUB17 (PLANT U-BOX17); ubiquitin-protein ligase. similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G01830.1); similar to Avr9/Cf-9 rapidly elicited protein 276 [Nicotiana tabacum] (GB:AAP03882.1); similar to ACRE 276-like protein [Solanum tuberosum] (GB:ABK96801.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48014.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-lik Range:  from: 10264381    to: 10266804    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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