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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                     --------->DEAR3(1)
                    --------->RAP2.3(1)
                   --------->LBD16
                   ------>NtERF2
                  --------->ANAC46
                 --------->MYB46(3)
               <---------ARR14(2)
              <---------CCA1(2)              --------->DEAR3(2)
             <---------SPL7                  --------->ANAC58
          --------->ABI4(1)                  --------->ANAC58
          ------>NtERF2                     --------->SPL1(2)
         --------->DREB2C(2)                --------->SPL7
         ------->GAMYB                     --------->SPL1(1)
         --------->DEAR3(1)               <---------SPL7   <---------At4g35610
         <---------ALFIN1               <---------------AtSPL3
        --------->MYB46(3)      <---------ANAC58 <---------MYB46(3)
      <---------ALFIN1------>NtERF2    <------------------SPL14             <---------At4g35610
      --------->AtMYB61         <---------ANAC58------->TEIL               --------->ANAC58
     --------->MYB46(3)<---------ANAC46<---------DOF5.7(2) ----------->RAV1(2)   <----------DOF2
------>ARR11(3)<---------ARR11(1)    <---------MYB52(1)------>NtERF2       --------->ANAC58   <-----
-------ARR11(3)--------->ARR14(2)    --------->DOF5.7(2)   --------->At4g35610 --------->At4g35610
 
gctcttcgaccaccgccgtatccgccgcttgtatagcgtcgttatcgtacggacgttgcgccatctgaagctctgcgtaagcagctttaatggaagtcgt  10249200
                      <---------ANAC46
                 ------->GAMYB
                 --------->AtMYB61
                 <---------ALFIN1
                --------->MYB46(3)
               -------->P
           --------->ANAC46
       <------ZmHOX2a(2)
      --------->ARR14(3)
      --------->ARR14(2)
      <---------ARR11(3)
      --------->ARR11(3)                                   ------>ZmHOX2a(2)             --------->AHL20(2)
      <---------ARR14(3)                                 --------->ARR11(3) <---------HSFB2a(2)
      <-----------ARR10                              <----------DOF2        --------->HSFB2a(2)
      <---------ARR14(2)----------->GT1         --------->ANAC58       <---------At4g35610
    ----------->ARR10<---------ZAT2             --------->ANAC58 <---------At4g35610   <----------DOF2
----SPL7------>ZmHOX2a(2)        --------->At4g35610 --------------------->WRI1--------------->AtSPL8
 
actagcgaagatcttcgcaaccacagcttgtaaaacagctctattacgctctcgcactttgatctctccgcttctgctactggaagtactctttaaatcg  10249300
                                                                        <---------MYB46(3)
                                                                        <-----------RAV1(1)
                                                                       <---------MYB52(1)
                                                                      <-------GAMYB
                                                                     <---------ANAC58
                                                                  --------->ARR14(2)
                                                                  <---------ARR14(2)       ---------
                                                            --------->GLK1(2)              ---------
                                                           <---------ARR14(2)      <---------ARR11(3)
                                                           --------->ARR14(2)      --------->ARR11(3)
                          <------NtERF2                    <---------GLK1(2)       --------->ARR14(3)
              <------NtERF2     >>>>>>>>>SARD1         <-------TEIL  <---------ANAC58      <--------
            <---------DEAR3(1)  >>>>>>>>>CBP60g    >>>>>>>>>MYB98 --------->GLK1(2)<---------ARR14(3)
   <---------GLK1(2)    <---------DEAR3(1)     <----------DOF2 <---------YAB1   <------ZmHOX2a(1)
 
aaaacagagtctccgtcgtcgtcttcgtcgtcgaaatttggattttgggactttaacatacagattccgattccgttgttggaggagaccttcgtcgacg  10249400
                         --------->KAN4(2)
                        --------->HSFC1(2)
                        --------->HSFB2a(1)
                        <---------KAN4(1)
                   --------->HSFB2a(2)
                   <---------HSFB2a(2)
                   --------->HSFC1(1)
                  <---------LBD16
    <---------TOE2(2)   --------->KAN4(1)
    <---------TOE1(2)   <---------HSFC1(2)
    <---------TOE2(3)   <---------HSFB2a(1)                                                     ----
    <---------TOE1(3)  <---------KAN4(2) <----------DOF2                                        <---
>DEAR3(1)      <----------DOF2           <---------DAG2          <<<<<<<<<TBF1               -------
>ETT(2)   --------->ANAC55(2)           <---------ANAC58    <---------GLK1(2)            <---------ANAC46
-DEAR3(1) <---------ANAC55(2)           <---------ANAC58 <---------WOX13(1)          --------->ARR11(3)
 
ttgttcttaggttacatactttctggaatgttctcgctaacttgctttttcttctcactgatggattcttcttcaatgtctccattgagatgttgtgaaa  10249500
     --------->MYB52(1)                                                        *TSS   ---------->DOF2
------->GT1                                                                    ---------->DOF2
-------ID1      <-------TEIL                                             ----------->GT1     -------
--->DOF2       --------->GLK1(2)       ----------->HVH21                ------------------------>ANAC81
 
ggaaaaaaaaacagagagattcagtagtttttttttttttttctgacaaggagaagtttttttggtgagtctgaaacagcaaaaaagaagaaaggagtga  10249600
                         <---------AHL20(2)      --------->ALFIN1
                         --------->AHL20(2)    <---------ANAC58
                         --------->AHL20(1)    <---------ANAC58
                         <---------AHL20(1)    <---------ANAC46
                      --------->YAB1       ---------->DOF2       --------->CCA1(2)               ---
  <---------ICU4    <---------YAB1 ---------->DOF2   ---------->DOF2                          ------
  --------->ATHB12  --------->AHL20(2) <---------ANAC58      <---------WOX13(1)     <---------ETT(2)
 --------->ICU4     <---------AHL20(2) <---------ANAC58   <---------YAB1            --------->ETT(2)
-->ALFIN1          --------->TOE2(3)   <---------ANAC46--------->ICU4    ---------->DOF2------>ZmHOX2a(2)
 
aggaatgatttcaaataacaaatattaataaaatgaggcaaagcgtgaaagcgtgggaaagatgatagatagaagaaaaagagaaggtcgatcgtatttt  10249700
                                                                             --------->YAB1
                                                                      --------->AHL20(2)
                                                                      <---------AHL20(2)
                                                                     --------->AHL20(1)
                                                                     <---------AHL20(2)
                                                                     --------->AHL20(2)      -------
                                                                     <---------AHL20(1)      -------
                                                     <-------TEIL --------->AHL20(2)  <-------GAMYB
        <----------DOF2                        <-----------GT1    <---------AHL20(2) ----------->GT1
  <----------DOF2          <-----------GT1    <---------AHL20(2) <---------AHL20(2)  <---------MYB46(3)
------->ID1         --------->AHL20(2)        --------->AHL20(2) --------->AHL20(2) --------->ALFIN1
--------->AtSPL8  <----------DOF2        ---------->ID1         <---------AHL20(2)<-----------RAV1(1)
 
gttctctttttcttttgaatactttatatataactatattgtttgtttttttaatatacgtttgtatattaatttatttagcataatgtggttgaatagt  10249800
                  <-------TEIL                      --------->ANAC58                   <---------ZAT6
  --------->ANAC55(1)                   <---------At4g35610                         <--------P<-----
  <---------ANAC55(2)                   --------->HSFC1(2)      ----------->GT1   <---------ANAC46
  --------->ANAC55(2)  --------->ALFIN1 <---------HSFC1(2) --------->AHL20(2)    <---------MYB46(3)
---->GT1--------->AHL20(2)     --------->ALFIN1     --------->ANAC58        <---------AtMYB61 ------
-->YAB1<---------WOX13(1)      <---------ZAT6<----------DOF2<---------AHL20(2)  --------->ETT(1)<---
 
aagacacttaattgaataacattcatgtgtagcagtgtgagtaagcttctttcacaaggattttaaattgagaaaatttgtggtcgggtagagtttgtcg  10249900
                                                                                     <---------ICU4
                                                             --------->YAB1         --------->ICU4
                                                            <---------YAB1          <---------YAB1
                                 --------->ICU4           <-----------GT1         --------->YAB1
                            --------->ANAC58             <---------YAB1          <---------YAB1
                            --------->ANAC46             <---------AHL20(2)     --------->ARR11(3)
                  --------->ANAC58            <---------AHL20(2)                <---------ARR11(3)
        <-------GAMYB       --------->ANAC55(2)          --------->AHL20(2)    --------->YAB1
       ----------->GT1      <---------ANAC55(2)       <---------DAG2          --------->ICU4
----ANAC46        --------->ANAC58<---------ICU4      <----------DOF2     <---------YAB1
--->ETT(1)    --------->YAB1--------->ANAC55(1)    <-----------GT1  <---------TOE2(3)--------->ATHB51
---NtERF2    <---------YAB1 --------->ANAC58 --------->AHL20(2)<---------YAB1 <---------ATHB12<-----
 
gagattaatggggttaattataagcacttatacgtaattatgtctagatttattttactttttattatactaaggtgatcaatgatcataatttgttttt  10250000
                     <---------GLK1(2)
                   <---------ARR11(3)
                   --------->ARR11(3)
                   --------->AHL20(1)
                  <---------AHL20(2)
                <---------AHL20(2)                                     --------------->AtSPL8
                --------->AHL20(2)                                     --------->DAG2
              --------->AHL20(2)           --------->ATHB51            <---------------AtSPL8
              <---------AHL20(2)           -------->HAHB4              <---------TOE2(3)
            <---------AHL20(2)             <---------ICU4              <---------------AtSPL3
            --------->AHL20(2)             --------->ATHB12            <---------TOE1(3)
          <---------AHL20(2)               <--------ATHB1              --------->MYB59
          --------->AHL20(2)              --------->AHL20(2)           --------------->AtSPL3
        <---------AHL20(2)                --------->ICU4             --------->CCA1(2)
      --------->AHL20(2)                  <---------AHL20(2)        --------->ARR11(3)
      <---------AHL20(2)                  <---------ATHB51<---------ICU4
    <---------AHL20(2)                    <---------YAB1  <---------AHL20(2)                 <------
    --------->AHL20(2)                  --------->YAB1<---------AHL20(2)      <----------DOF2-------
----YAB1--------->AHL20(2)        ----------->GT1     --------->AHL20(2)     <---------DAG2  <------
 
attctatatatatatatatatatatattctcatatatatgtaaaaataattgaagaaataaatatttcgaagataaggtaccttttttgaagtgagtgaa  10250100
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AGI:  At1g29300.1   
Description:  UNE1 (unfertilized embryo sac 1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14870.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14870.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14870.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO48018.1); contains InterPro domain Protein of unknown function DUF641, plant (InterPro:IPR006943)
Range:  from: 10247766    to: 10249580    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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