Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->AHL20(2)                                      <---------AHL20(2)                                      --------->AHL20(2)                                      <---------AHL20(1)                                      --------->AHL20(1)                                  --------->AHL20(1)                      <---------AHL20(2)                                  --------->AHL20(2)                      --------->AHL20(1)            --------->AHL20(2)    <---------AHL20(2)                      <---------AHL20(1)        <    <-----------GT1               <---------AHL20(1)                     <---------AHL20(2)     <---- -----AHL20(2)                   --------->AHL20(2)                      --------->YAB1<-----------GT1 ---->AHL20(2)           --------->TOE2(3)             --------->AHL20(2)--------->AHL20(2)    <----- -----AHL20(1)         <---------ATHB12<---------AHL20(2)   --------->AHL20(1) --------->YAB1 -------   tattttctacagttttaaatattcaaacattagaaataaatttaattttctcactgaataaatatactactaaaattatattcaaaataaaaccattttt  10214400                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(1)                                                                                         --------->AHL20(2)                       =================================================================MADS_MADS                       <-----------------AG                  --------->TOE2(3)  --------->YAB1       <---------MYB46(3)                              --------->ANAC55(2)      -------->HAHB4      -   <---------TOE1(3) --------->ZAT14                  <---------TOE1(3)        ----------->GT1      <   <---------TOE2(3) --------->ARR14(2)               <---------TOE2(3)        <---------YAB1       -  ---------->DOF2    <---------ZAT14           <---------ANAC46 --------->AHL20(2)      --------->AHL20(2) ---------AHL20(2)   <---------ARR14(2)        <---------ANAC58 --------->YAB1 --------->ICU4       - -----AHL20(2)    <---------ANAC46             <---------ANAC55(1)           --------->YAB1         < ----YAB1    <---------ANAC58                  <---------ANAC58 <---------AHL20(2)   --------->ICU4 < -->AHL20(2) <---------ANAC58  --------->ANAC55(2)    --------->MYB59   <---------------AGL15--------   attttaaagttgttgtcttggtgtatactgtataggtaataggcatatagcgtgtttaggtaacatttatatttctctataatgataaaaattaattaga  10214500  ----------->GT1 <-------MYC3 ------->MYC3                                                               <---------ICU4 <-------MYC2                                                               ---------->DOF2 ------->MYC2                                                               --------->YAB1 <-------MYC4                                                              <---------ATHB12 ------->MYC4                                                          ------------>CBF -------->ANAC55(2)                                             --------->AHL20(2) ---------ANAC55(2)                                             <---------AHL20(2) -------->O2  ------>NtERF2             <---------ICU4          <---------AHL20(1) -------->TGA1a           --------->MYB52(1)                   --------->AHL20(2) ---------O2 --------->ATERF1(2)       <---------YAB1      <---------AHL20(1) ---------TGA1a<------NtERF2         --------->YAB1        --------->AHL20(1) ->YAB1      <---------ATERF1(2)    <---------YAB1         --------->AHL20(2)                 -------   acacgtgtaaatatgctggcaaaacaaaaaacggatttatgataatttcgaagtcaaatgatatattaaattttccaataaagactattagaccatttca  10214600                                                                             <---------MYB59                                                                 --------->ORA47(1)                                                                --------->DEAR3(1)                                                                ------->GAMYB--------->AtMYB61                                                               --------->MYB46(3)                                                               --------->DEAR3(2)                                                              -------->P     ------->GAMYB                ------------>MYB.PH3(1)   <------MYB46(1)   --------->MYB46(3)        <---------AHL20(2)                <------MYB83 --------->TOE2(3)    --------->MYB46(3)    <--------ATHB1                        <---------ANAC55(2) --------->MYB52(1)        <---------AHL20(1)    --------->AHL20(2)                    --------->ANAC55(2)--------->MYB55(1)         --------->AHL20(2)    --------->ATHB51                     --------->MYB59    <---------MYB55(2)          <---------AHL20(2)    <---------AHL20(2)                   --------->MYB46(2) <---------MYB111(2)------>MYB83    <---------ICU4             --------->ANAC58      <---------ATHB12      --------->ANAC58      <---   <---------ATHB51  <---------MYB52(1)  <---------TOE2(3)  <---------MYB52(2) ------>MYB46(1) <-----   --------->ICU4  ----------->GT1<-----------------AG--------->YAB1     --------->MYB46(3)    <----- ----->CBF   --------->AtMYB61 --------->ANAC58<----------ID1------->GAMYB --------->ANAC58  <-------   atgtaataatttaaaccaaaaccgttataaaacaagacaaaattaggtaaggccaaacatcaacaaccggccaaaacaaccaaaccctattttattttcg  10214700                                                ------>MYB46(1)                                                ------>MYB83                                              ------->GAMYB                                              <---------MYB59                                              --------->AtMYB61                                             --------->MYB46(3)                                            -------->P                                            ------>MYB46(1)                                          ------->GAMYB                                          --------->AtMYB61                                          --------->MYB46(3)                                          <---------MYB111(1)                                         --------->DEAR3(2)                                         <---------ATHB12                                         <---------MYB55(2)                           ------->GAMYB                                         <---------MYB52(2)                           --------->AtMYB61                     ---------->ID1      --------->MYB46(3)                  <---------MYB52(2)              <---------DAG2            --------->ANAC46                 <---------MYB52(2)    ------              <----------DOF2           ------>MYB46(1)             --------->ANAC58 --------->MYB46(3)       <----------DOF2                  --------->ANAC58            --------->ANAC58------>MYB83----- ------MYB52(1)   <---------AtMYB61     ------>MYB83            --------->ANAC58    -------->P<------ ----ANAC58  <---------ANAC58           -------->P              --------->ANAC46    ------>MYB46(1) ----ANAC58  <---------ANAC58           --------->ANAC58        --------->ANAC58  --------->AtMYB61 ----GT1    ---------->ID1  <-----------GT1 ------>MYB83      --------->MYB52(1) --------->MYB46(3)   ttctgttttcttttggctttttggtcgttttcacgtttgcccaaccaaccaaacaaggagactcaaacggaagaaacaaacaaaccaaccaaaacccccc  10214800                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                <---------ALFIN1-----                                                                                --------->DEAR3(1)<--                                                                                --------->AtMYB61----                                                                           <-----------HVH21  <------                           <----------DOF2                                <---------MYB46(3)  -------                        --------->ARR11(3)                               <---------AtMYB61   <-------                        <---------ARR11(3)        --------->ANAC58    <-----------RAV1(1)  --------->HSFB2a(2)                     <---------GLK1(2)            --------->ANAC58 <---------ALFIN1        <---------HSFB2a(2)                  --------->YAB1       <---------ANAC55(2)         --------->AtMYB61   <-----------HVH21                 <---------ATHB12      --------->ANAC58           --------->MYB46(3)   <---------SPL7                ------>MYB46(1)        --------->ANAC58         --------->AtMYB61     --------->DEAR3(1) --->LBD16      ------>MYB83           --------->ANAC55(1)      ------->GAMYB  --------->MYB46(3)---- ---->LBD16    --------->WOX13(1)     <---------LBD16          <---------MYB55(2)   <-----------HVH21 ---LBD16    ------------>CBF       <---------REM1(2)          --------->MYB46(3)  --------->DEAR3(1)   gaatacaaaacccaaaccaatcagaagctctttctttggacacggatggctcaagccttggctcaaccaccactggtggtcaccaccgtcgtcccagacc  10214900          ------>NtERF2          <---------ATERF1(1)         <---------ALFIN1        --------->ERF1        <------NtERF2        --------->ATERF1(1)       --------->ABI4(1)       <---------ATERF1(1)       ------>NtERF2      --------->DREB2C(2)      --------->ANAC58      <---------ATERF1(2)      --------->DEAR3(1)      --------->ANAC46      --------->ANAC58      --------->ATERF1(2)      --------->RAP2.6(2)      --------->RRTF1(3)      --------->RRTF1(2)      --------->RAP2.3(3)      --------->RAP2.3(2)     --------->RAP2.6(1)     --------->ATERF1(1)     --------->RRTF1(1)     --------->DEAR4(2)     --------->ERF1     --------->ORA47(2)     --------->RAP2.3(1)     <------NtERF2    --------->At4g35610    <---------DEAR4(2)    <---------RAP2.3(1)    <---------DREB2C(1)    <---------ATERF1(1)    <---------At4g35610    --------->ABI4(1)    ------>NtERF2   --------->DEAR3(1)   --------->RAP2.3(3)   --------->ANAC46   <---------DEAR3(1)   <---------ALFIN1   --------->RRTF1(3)   --------->RRTF1(2)   <---------ATERF1(2)   --------->RAP2.3(2)   --------->ATERF1(2)   --------->RAP2.6(2)  --------->RAP2.6(1)  --------->ATERF1(1)  <------NtERF2  --------->RRTF1(1)  --------->ORA47(2)  --------->DEAR4(2)  --------->RAP2.3(1)  --------->ERF1 <---------DEAR4(2) <---------At4g35610 --------->At4g35610 <---------DREB2C(1) <---------RAP2.3(1) --------->ABI4(1) <---------ATERF1(1) ------>NtERF2 -------->RRTF1(2) -------->RRTF1(3) -------->RAP2.3(3) -------->ANAC46 ---------ALFIN1 -------->DEAR3(1) -------->RAP2.3(2) ---------DEAR3(1)       ---------->DOF2 ---------ATERF1(2)    --------->MYB46(3) -------->RAP2.6(2)   --------->ANAC58                  ------>ZmHOX2a(2) -------->ATERF1(2)   --------->ANAC58                 --------->GLK1(1) ------->ATERF1(1)   --------->RAP2.3(3)               --------->HSFB2a(1) ------->RAP2.6(1)  <---------ALFIN1                   <------ZmHOX2a(2) -----NtERF2<---------ALFIN1                          --------->ARR11(3) ------->RRTF1(1)  <---------ZAT18                    <---------ARR14(3) ------->RAP2.3(1) --------->ABI4(1)                  <---------ARR11(1) ------->DEAR4(2)  --------->ZAT14                    --------->ARR14(3) ------->ORA47(2) <---------ALFIN1                    --------->ARR14(2) ------->ERF1     --------->AtMYB61                   <---------ARR14(2) ------>LBD16     --------->DEAR3(1)                  <-----------ARR10 --->NtERF2--------->MYB46(3)                         <---------ARR11(3) ----->DEAR3(1)--------->AtMYB61                     <------NtERF2 ----->ANAC46  <---------ALFIN1                      <---------ARR14(1)----------->GT1 ---->MYB46(3) --------->DEAR3(1)                    <---------CCA1(2) <------MYB83<-------TEIL -------ATERF1(1)--------->ANAC46                  <---------ANAC46    <------MYB46(1) ----->ANAC58 <---------MYB55(2)                   <---------ANAC58  <---------WOX13(1) ---ARR14(2)--------->DEAR3(1)                     <---------ANAC58 --------->ARR14(2)         ------ -->ARR14(2)--------->AtMYB61            --------->ANAC46           <---------ARR14(2)   ---------->DOF2 --ALFIN1--------->DEAR3(1)    <---------SPL7<-------TEIL       <---------LBD16   --------->CCA1(2) ----->ANAC58 --------->MYB46(3) --------->SPL7   <---------LBD16 <------NtERF2  <---------ARR14(2)   cgccgccgccgccaccaccaccgcacccaaagccgtatgctctacgatacatggcggatcttcttggccggattggtataatggatacagacaaagatgg  10215000                                                                                            <--------                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                       --------->ANAC58                                                                                       --------->ANAC55(1)                                                                                       --------->ANAC46                                                                                       --------->ANAC55(2)                                                                           --------->HSFB2a(1)                              <------ZmHOX2a(1)                            <---------HSFC1(2)                            <---------TOE1(2)                              --------->HSFC1(2)                           ------>ZmHOX2a(1)                               <---------HSFB2a(1)                     <------ZmHOX2a(1)                                     <---------At4g35610                  --------->HSFB2a(2)                              <---------ANAC58    --------->ANAC58                  <---------HSFB2a(2)--------->ANAC58              <---------ANAC58    <---------ANAC55(2)                 <---------TOE2(1)   --------->ANAC46             <---------ZAT2      <---------LBD16                 <---------TOE1(1)   --------->ANAC58       <---------SPL7----------->ARR10 ---------        ----------->RAV1(1)--------->HSFB2a(2)            --------------->AtSPL3   ------>NtERF2     <---------At4g35610   <---------HSFB2a(2)            <---------------AtSPL3   <-----------HVH21     --------->At4g35610  --------->TOE1(2)               <---------------AtSPL8  --------->ANAC46 ----->GT1      <---------------------WRI1        <---------YAB1  --------->ZAT2--------->HSFB2a(2)   taacatcagcccacagagtccgaggagtcctaggagcccaagaaacaacattctcatggggaagtacgagcttgggaagcttctcggccacggaaccttt  10215100                                                                                          --------->At4g35610                                                                                          <---------At4g35610                                                                                        =============                                                                                        <--------P                                                                                       <-------GAMYB                                                                                       <---------ANAC58                                                                                      <------MYB46(1)                                                                                      <------MYB83                                                                                      <---------MYB46(3)                          --------->ARR14(2)                                         <---------AtMYB61                          <---------ARR14(2)    ---------->DOF2                      --------->MYB59  ----------->GT1         --------->GLK1(2)<------NtERF2                           <---------ANAC46 <---------TOE2(3)   --------->TOE2(3)   --------->RAP2.6(2)                     <---------MYB46(3) - -HSFB2a(1) <---------At4g35610      --------->DAG2                      <---------YAB1============== >HSFB2a(1) --------->At4g35610     ---------->DOF2                  --------->ARR11(3)<---------ANAC58   gcaaaggtttatttagctcaaaacatcaaatctggagataaagtcgccattaaagtcatcgacaaggagaagattatgaagagtggtttggttgctcaca  10215200                               <---------MYB52(1)                               ----------->HVH21                              <-----------HVH21                             --------->ANAC46                          <-----------HVH21                       <---------ANAC58                       <---------ANAC46                       <---------TGA1a                       --------->O2                       <---------ANAC58                       --------->TGA1a                       <---------O2                       --------->DEAR3(1)                     --------->LBD16                     ------>NtERF2                    --------->ANAC46              --------->ARR14(2)<---------ALFIN1                                                <----       <---------GLK1(1)  <---------ARR14(2)                        <------NtERF2               <----       --------->GLK1(1)  --------->ARR14(2)                       ------>NtERF2               <-----   ----------->GT1  --------->DEAR3(1)                            <----------ID1      <----------DOF2 ================================MYC_MYB                    <---------ARR14(2)     <-----------GT1 -------->MYB52(1)------>ZmHOX2a(1)                         --------->ARR14(2)  <---------ARR11(3) ================================MYC_MYB                 <---------TOE2(3)      --------->ARR11(3)   tcaaacgggaaatctctatcctccgccgtgtccgtcacccttacatcgttcatctattcgaggttatggcgacgaagtccaagatttactttgtgatgga  10215300  Previous    Next  AGI:  At1g29230.1    Description:  CIPK18 (SNF1-RELATED PROTEIN KINASE 3.20); kinase. similar to CIPK13 (SNF1-RELATED PROTEIN KINASE 3.7), kinase [Arabidopsis thaliana] (TAIR:AT2G34180.1); similar to putative serine-threonine kinase [Gossypium hirsutum] (GB:AAT64036.1); similar to CBL-interacting protein kinase 19 [Populus trichocarpa] (GB:ABJ91226.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, acti Range:  from: 10214846    to: 10216408    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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