Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------LBD16                          --------->ANAC58                          --------->ANAC46                          --------->ANAC58                              <---------YAB1                    <-----------TGA1                                   <---------AHL20(1)                   --------->ANAC46                                    --------->AHL20(1) <---------ANAC58     ---------->DOF2<-----------HVH21                          ----------->GT1          --------->ARR11(3) ---------->CBF    <---------ANAC58                           ----------->GT1   ----------->GT1  ---- ----GT1           <---------ANAC58                 <----------ID1     --------->AHL20(2) <---------ANAC58   aaacaatgaaagagcaagtttgcgtcacaagtcattctcgggtctatgctaaaaaaaacaaaaatgggtaaaatataatacagggataaatttcttgaga  10207500                                                                                   <---------MYB52(1)                                                                                  <-----------TGA1                                                                                  <---------RAP2.6(3)                                                                                  <-----------HVH21                                                                                 --------->ANAC55(2)                                                                                 <---------ANAC55(2)                                                                          <-------TEIL                                                                         --------->CCA1(2)                                                                         --------->ARR14(1)                                                                         --------->GLK1(2)                                                                        <---------GLK1(2)                                                                        <---------ARR14(2)                                                                        --------->ARR11(1)                                                                        --------->ARR14(2)     ------                                                                       <---------HSFC1(2)    ------>ZmHOX2a(2)                                                                       --------->HSFC1(2)   <------ZmHOX2a(2)                                                              <---------TOE2(3)  <---------ANAC58                                                            ---------->DOF2   --------->ARR14(2)    -        --------->GLK1(1)                                   --------->MYB52(1)<---------ARR14(2)   --       <---------GLK1(2)  --------->YAB1            ----------->GT1    <---------HSFB2a(1) <---------ARR14(2)   <<<<<<<GRF7  --------->ARR11(3)             --------->ANAC58 ====================================HOX2a_HOX2a ------>ZmHOX2a(1)       <---------YAB1        --------->ANAC55(1)     --------->HSFB2a(1) --------->ARR14(2) ----------->HVH21------>ZmHOX2a(2)            --------->ANAC46 <------ZmHOX2a(1)<---------ANAC58<--- ========================HOX2a_HOX2a           --------->ANAC58 ===================================HOX2a_HOX2a ----->GLK1(2)  <---------ARR11(3)             --------->ANAC55(2)    ----------->ARR10   <---------GLK1(1)   ttcctgacagatttctatgatctaggtattataacacagtttcaaacacacgcattgttaaataaaggatagaagattcggttccgtcatggagatcggt  10207600       <---------SPL7      <---------MYB52(2)   <---------ETT(2)                                                              <---------ATHB12  <------ZmHOX2a(2)                                                             <---------ARR14(2) --->DOF5.7(2)                                                              --------->ANAC58 ------>GAMYB ---------->DOF2                                               --------->ANAC46 <------- ------->MYB46(3)   --------->At4g35610                     <---------REM1(1)   --------->ARR14(2)  < ------DOF5.7(2) --------->At4g35610         <---------ANAC46  ------->TEIL --------->ANAC58 <-------   aacgatcgacgaacgagaaagcagaagaacagaagctatctgttctggtgtgatttgttcacatgtagctatctccatacccaatcttcttcattaaggt  10207700   <---------bZIP60(2)                                                                        <------   <---------ANAC58                               <-----------GT1               <---------ARR14(2)   <---------O2                              <---------ANAC46                   --------->GLK1(2)   <---------ANAC58                      <---------ANAC58                      <---------GLK1(2)   --   <---------ANAC46         <----------DOF2  <---------ANAC58          <---------GLK1(1)--------->MYB46(3) --TOE2(3)                  <---------DAG2   <---------ANAC58     ---------->DOF2   ------>ZmHOX2a(1) -----------RAV1(1)   --------->YAB1     <---------ANAC58      --------->AHL20(2)  --------->TOE2(3) --TOE1(3)         --------->YAB1     <-----------GT1         --------->AHL20(2)--------->ARR14(2) <-   ttatgtcgtggctcttcttatttataaaaactttttttttttgccttgcgttttactcttcccattaaaaaagaattcagagattcctcaacaactatgt  10207800                              --------->GLK1(1)                             --------->AHL20(1)                              <---------GLK1(1)                    <---------YAB1                            <------NtERF2         ------------>CBF<------------CBF                          --------->ETT(1)      <-----------GT1 --------->AHL20(1)                  <              <---------AHL20(2)       <---------ALFIN1         <---------AHL20(2)        --------->WOX13(1)             <---------AHL20(2)      <---------ALFIN1  --------->YAB1       <---------AHL20(1)     <- ---YAB1     --------->AHL20(2)    ------>ZmHOX2a(1) <------------CBF       --------->ARR11(3)    <-- ------->At4g35610        <---------ANAC46<---------DAG2        <---------AHL20(1)      ------------>CBF --------At4g35610     <-----------RAV1(1)<----------DOF2       --------->AHL20(2)      <---------ATHB12   tagcttcacttagaattaatttgttctgtcgggattcctccacacttttttcaccaattgtcatattttattgttgaatattttggttccatcaatctct  10207900                                                            <---------At4g35610                                              ------>ZmHOX2a(1)                  <---------YAB1   <---------ANAC58                          --------->TOE2(3)                <------ZmHOX2a(2)   <---------ANAC58                    <---------AtLEC2     <---------ZAT2   <---------ARR11(3) ---------WOX13(1)                   <-----------GT1        --------->ZAT2   --------->ARR11(3) -----------CBF                <-------TEIL ----------------->AG            <---------At4g35610    <- -------ICU4 *TSS      --------->ARR11(3)<---------GLK1(1)  --------->At4g35610 --------->TOE2(3)  ==   taattgcttgccatacatcgagagagttcttgattcattttgcatttcctaaatagtttatgagctgagagaagagacagatcattaatggggaaacagg  10208000                                                                                 --------->ARR11(3)                                                                                 <---------ARR11(3)                                                                                <---------ICU4                                                                   --------------->AGL15                                                                   <---------------AGL15                                                                   <----------DOF2 ------>ZmHOX2a(2)             ------>ZmHOX2a(1)                                    <-----------------AGL1    <---------HSFB2a(2)       >>>>>>>>>GATA-1                     <-----------------AGL3    --------->HSFB2a(2)  --------->TOE2(3)  >>>>>>>>>CBP60g       <-----------------AGL2 -----ZmHOX2a(2) ----------->RAV1(2)        >>>>>>>>>SARD1     <---------GLK1(2)--------->YAB1 ===================HOX2a_HOX2a ---------->DOF2     <------ZmHOX2a(1)          --------->ICU4   gatcaccgagaagtcctcgacctgaaaccatagataaagaagagaaatttgggaggagaagtttggattctttatctggtaatgatctcttactcggtag  10208100                                             <---------YAB1                                 <---------ARR11(3)                                 <---------ARR14(2)                                           <------                --------->HSFC1(2) ------>ZmHOX2a(2)                                     --------->YAB1                <---------HSFC1(2)<------ZmHOX2a(2)                                     <-------TEIL    --------->CCA1(2)            --------->ARR14(2)             ----------->RAV1(1)----------->RAV1(1)   --------->ARR14(2)            --------->ARR11(3)   --------->ALFIN1          --------->ANAC46    <   <---------ARR14(2)            <---------AGP1---------->DOF2 <----------ID1   --------->ANAC58    <   <---------ARR11(3)            <-----------ARR10    <---------ZAT6            --------->ANAC58 <---   --------->ARR11(3)  --------->ANAC46 --------->YAB1<---------AtMYB61  <---------HSFB2a(2)  <------   aagaatatatgcaagtgaagtttccaaggctcaaggatctaagcatgatcaaagcagtggtagtagcaacaaattttggaagaagcaacattcatggctt  10208200      <----------DOF2               --------->MYB52(1)                        <----------DOF2  ==================================HOX2a_HOX2a                              ------>ZmHOX2a(2)  <------ZmHOX2a(1)                <---------WRKY38(1)                     --------->ARR11(3) ---ANAC58                        ----------->HVH21                <---------YAB1                 <-- ---------TOE2(2)            ------>ZmHOX2a(2)                     <---------TOE1(3)              <-- ---------TOE1(2)          --------->ARR11(3)                      <---------TOE2(3)    <---------MYB52(1) ------ANAC46              <---------ARR11(3)                    <---------ICU4       <---------YAB1- ---ANAC58     <---------MYB52(1)<-----------HVH21   <---------AtLEC2      <---------ARR11(3)     <--   cgtaggaactttaagtcgatagttttgatgatctcagtcaccggtttcattttctgtatggattccattatggtttcgatctttcattccgatagtagag  10208300                                                                      <-----------GT1                                                                  <----------DOF2                                                            <---------ARR11(3)         <---------ARR11(3)                               <---------AHL20(1)       --------->ANAC58                                   <---------ARR11(3)       --------->ANAC46                                   --------->ARR11(3)       --------->ANAC58                                   --------->AHL20(1) -------ANAC58                            --------->DAG2 --------->AHL20(2)               <---------ANAC58 -------ANAC46                            <---------TOE2(3) --------->ARR11(3)            <---------ANAC58 -------->ALFIN1 <---------TOE2(3)        <---------TOE1(3)<---------CCA1(2)        <---------YAB1 -------ANAC58   <---------TOE1(3)<----------DOF2    --------->AHL20(2)      ------>ZmHOX2a(1)   ccgtggtgcaagacatttcaaggttgagcaatatgactttgcataaggtttgagaataaatatatcttctttatacatcctccattgttattgcttctta  10208400  Previous    Next  AGI:  At1g29200.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G62330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48037.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 10207913    to: 10210608    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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