Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              ---------->DOF2                                   <---------ARR11(3)                                   <---------AHL20(1)                                   --------->AHL20(2)                                   --------->AHL20(1)                    <---------ATHB12    <---------AHL20(2)           --------->MYB52(1)           <---------MYB46(3)      <---------AHL20(2)           <---------AHL20(2)           ----------->GT1         --------->ARR11(3)           --------->AHL20(2)         <---------MYB52(1)     --------->AHL20(2)            --------->YAB1                   ------ ---->TOE2(3)     --------->WOX13(1)    --------->AHL20(2)--------->AHL20(2)          --------->MYB46(3) ---TOE1(3)<------MYB83        --------->AHL20(2)         <---------AHL20(2)        --------->MYB52(1) ---TOE2(3)<------MYB46(1)     <---------AHL20(2)     --------->AHL20(2)          <---------MYB52(2) --DOF5.7(2)<-------GAMYB     --------->AHL20(2)      <---------AHL20(2)   ----------->GT1 <---------ZAT14   tttataaaacagttggttaacaatcactaaaaattaatatattaaaaaaagactaaaaaattaaaaataaataccgatggataaactaacgactacaatg  10147300                  <-----------GT1                <----------DOF2              <---------YAB1           ----------->GT1     <---------YAB1             --------->ARR11(3)       --------->YAB1       ----------->GT1               <---------ANAC58             <---------ARR11(3) --------------->AGL15    <---------ICU4                  <---------ANAC58             <-----------GT1 <---------DOF5.7(2)         --------->YAB1                 --------->MYB59      --------->GLK1(2)    --------->DOF5.7(2)          --------->ICU4       <---------ANAC58   <---- --->AtLEC2 --------->YAB1--------->TOE2(3)   <-----------GT1                <---------ANAC58 <------   caaacacgattctattatctttactcttcgttaacaacaattagaaaataacaacaccatcatgaaaaaacaacatttttcttgtgtaattgggtatcgt  10147400                                                                 <---------YAB1                                                               <---------ICU4                                                              --------->ICU4                                                            <---------ICU4                                                           <---------YAB1                                                           --------->ICU4                          --                                                         <---------TGA2(1)                 <---------TOE2(3)  <---------ANAC58                                       <---------bZIP60(1)         --------->ZAT18  <---------ANAC58                    <-----------GT1    --------->TGA2(1)           <---------ZAT18 -----------------WRI1     --------->MYB52(1) <----------DOF2 <---------YAB1        --------->PCF5 <- ---ANAC46       ------->TEIL   ----------->GT1          --------->bZIP60(1)------->TEIL  ---------->DOF2   tgatgcttacaatacaacgaatgtagaacgaacagagtaaatacctctctttttcaatgacatcattatgaacgaatgaatttgtggtccactaaagttg  10147500                                        ----------->HVH21             ---------->DOF2            ----------->TGA1       <-------GAMYB            --------->AHL20(1)      ----------->GT1           <---------AHL20(1)                             <---------MYB59  <---- ------>ZmHOX2a(2)              --------->ARR11(3)                            --------->ANAC55(2)   - ------->ARR14(2)            --------->AHL20(2)                     <---------AHL20(2)       -------- --------ARR14(2)     ---------->DOF2 --------->At4g35610         <----------DOF2          <---------ICU4   ggatcggcccgttaaaaaagcccataaaccaaaaaatattggctgacgaatatttcaaaactgccattctttatttgtttacataactcaaaaacatgac  10147600                        <-------PIF5                        <-------MYC3                        ------->MYC3                        ------->MYC2                        <-------MYC2                        ------->PIF5                        ------->MYC4                       <---------ANAC46                       <---------O2                                     --------------------->WRI1                       <---------TGA1a                                 --------->ZAT2                       --------->TGA1a                                 <---------ZAT2                       --------->ANAC55(2)                        ------>NtERF2                       <---------ANAC55(2)                       --------->ANAC46                       --------->O2                              --------->ANAC58                     <---------ALFIN1                            --------->ANAC58                  --------->ANAC58                               --------->DEAR3(1)      --------->MYB46(3)<-------MYC4                             ------->GAMYB      ------------>CBF <--------ABF1                            --------->MYB46(3)     ============================MYC_MYB       <------------CBF --------->ATERF1(1)            ------     -------->P   --------->ANAC58            --------->ATHB12  <---------MYB55(2)      <------NtERF2    --------->WOX13(1)------>NtERF2          <---------YAB1     --------->DEAR3(1)    <---------DEAR3(1) -----YAB1        --------->ANAC46   --------->At5g28300       <---------ATERF1(1)<---------ATHB12 -------->YAB1<---------AHL20(2)     <-----------HVH21      --------->ZAT18    *TSS--------->YAB1  <- --->TGA1  --------->YAB1--------->ALFIN1  --------->YAB1   <---------ZAT18   ------------>CBF<------   gataatcaaccaatattaaaacgccacgtgttccctcgcggtcatttatcattgaatcgaagagcacccgcccagcttgtttcaatcgtcgtcgtttttc  10147700                                                                                                   <-                                                                                                 <---                                                                                                 ----        <---------ANAC58                              <---------HSFB2a(1)                        ----        <---------AtLEC2        <---------ANAC58      --------->HSFB2a(1)                        <---        <---------ANAC58        <---------ANAC58      <---------HSFC1(2)                     --------        <---------ANAC46        <-------GAMYB         --------->HSFC1(2)                     <-------  --------->ATHB12             <---------MYB46(3)--------->HSFB2a(2)                         -------- ---->ID1                     <---------AtMYB61 ------>ZmHOX2a(2)                            <------- ---------DOF2             <----------DOF2 --------->HSFB2a(2)                              --------- -----GT1          ---------->ID1          <---------HSFB2a(2)            --------->TOE2(3)<---------   tctttgatttgcctgaaatttgttctcttcttttggttgcaatttctcgatctcgaattttctgagagaatacaaaacttaatttctcaaaccccagcag  10147800                                                                                         --------->LBD16                                                                                        <---------ANAC46                                                                                        <---------ANAC55(2)                                                                                       ------>ZmHOX2a(2)                                                                                     <---------ARR14(2)                                                               <------MYB83          --------->ARR14(2)                                                               <---------MYB46(3)  ----------->HVH21                                                               <------MYB46(1)   <---------At4g35610                                                              --------->ALFIN1   --------->ZAT2                                                          <---------ANAC58       <---------ZAT2                                                          <---------ANAC46       --------->At4g35610 ------TEIL                                              <---------LBD16        <-----------ARR10---- ------ARR14(2)                                          --------->ABI4(2)      --------->ARR14(2) ----->ARR11(1)                              <------NtERF2<---------ANAC58      <---------ARR14(2) ----->ARR14(2)                            <---------ANAC46   <---------AtMYB61<------NtERF2    <---- ------GLK1(2)      --------->ANAC46       <---------ANAC58  <---------MYB52(1)--------->ATERF1(1) ->ZAT2 <---------TOE1(3)         <---------ANAC46      --------->ALFIN1      --------->LBD16   ----- --At4g35610        --------->ANAC58       <---------ANAC58<---------MYB46(3)<---------DEAR3(1)------ ->At4g35610        --------->ANAC58<------NtERF2      <---------SPL7        --------->ALFIN1  ------ --ZAT2 <---------TOE2(3)    <---------GLK1(1)       <---------DEAR3(1)     <---------LBD16    <----- -->RAV1(1)   <---------ANAC58  <---------ANAC58    <---------LBD16       --------->ANAC46     <----- --RAV1(2)    <---------ANAC58  <---------ANAC58  <---------ATHB12     <---------REM1(2)<---------ANAC55(1)   attcgaatttagggtttcttacacccattagatttcgcgtcgatggcgtccaatcgcggtgcgggtggttctctatacggcggagctgatccgtatagat  10147900                                                                         <------MYB83                                                                         <------MYB46(1)                                                                         ----------->GT1                                                                     --------->ARR11(1)                                                                     <---------GLK1(2)                                                         --------->MYB52(1)                                                   ----------->GT1   --------->ARR14(2) -->ZmHOX2a(2)                                --------->HSFB2a(2)    <---------ARR14(2) --ZmHOX2a(2)             ---------->ID1      ====================================MADS_MADS ---->CCA1(2)            <-----------GT1      <---------HSFB2a(2)  <---------TOE2(2) --->ARR11(3)         <---------GLK1(2)       --------------->AGL15<---------TOE1(2) --->AGP1         <---------YAB1           --------->GLK1(2)      <---------------AGL15 --------->DAG2 ----AGP1        <-----------GT1          <---------GLK1(2)       ------>ZmHOX2a(1) <---------ANAC46 ----ARR11(3)  <---------YAB1<----------DOF2 <---------LBD16     <-----------------AGL2---------->DOF2   ctaggtatatttctaatattatcagtttctccttttctgaaatcgattctggatagagaaaacgggtcctagatttggtgaattctgcgtaaagtacaag  10148000                                                                           <------ZmHOX2a(1)                                                                     <---------ZAT2                                                                     ----------->RAV1(2)                                                                     --------->ZAT2    --------->ZAT14                                                                     --------->At4g35610         <---                                                             <------ZmHOX2a(1)      ------>ZmHOX2a(1)          <---------ANAC58                                   ============================HOX2a_HOX2a          <---------ANAC58                                <---------At4g35610     ------>ZmHOX2a(2)          <---------ANAC46                                --------->At4g35610<---------WOX13(1) <----        <---------ANAC58                                <-----------RAV1(2)==============HOX2a_HOX2a        <---------ANAC58                               <-------TEIL<-----------RAV1(2) <---------ZAT18     <----------DOF2              --------->ANAC58    <-----------HVH21  <---------TOE2(3)      <----   <---------YAB1<---------ANAC46 --------->ANAC58<-----------RAV1(2)<---------At4g35610     --------   tatttatctttggtgtgtgatttgtagagaagggctaagcactagaaatgcttcaggttcagaggaaattcagctgaggattgatcctatgcactctgac  10148100                                  --------->ANAC58                                  --------->ANAC58                                <-----------RAV1(2)                              <-----------HVH21                             --------->bZIP60(2)                             --------->ANAC58                                              <<<<<<<<<GATA-1         <---------GLK1(2)   --------->TGA1a                                         <---------DAG2       ----------->ARR10     --------->O2                                            <----------DOF2 ------LBD16              ----------------->AGL1                                  <-----------GT1 -----bZIP60(2)           <-----------------AGL1   --------->ANAC58          ------>ZmHOX2a(2) -----ANAC46         <---------AtLEC2              --------->ANAC58        <---------ARR11(3) --->HVH21--------->GLK1(2)  --------->ANAC58  ----------->GT1             --------->ARR11(3)      <-   ctggatgatgagattctaggtctccatggccaagtcaggcaattgaaaaatgtaagaaaccctctaaatcccatttcgatctttctactttttatctata  10148200  Previous    Next  AGI:  At1g29060.1    Description:  Identical to Bet1-like protein At1g29060 [Arabidopsis Thaliana] (GB:Q8L9S0;GB:Q9LP36); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61644.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727) Range:  from: 10147679    to: 10149672    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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