Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->ANAC58                                                       ----------->RAV1(2)               --------->ANAC46                                                       <---------At4g35610               --------->ANAC58                                                       --------->At4g35610      ------>MYB83                                                               ------->TEIL      -------->P  --------->CCA1(2)                                            --------->REM1(2)      ------>MYB46(1)                                                         --------->ALFIN1    --------->MYB46(3)  <------NtERF2                                        --------------->AtSPL8    --------->AtMYB61  ----------->RAV1(1)  --------->ANAC58                <---------ANAC58      ---    <---------MYB59  <---------LBD16   --------->ANAC58                     <---------ANAC58      <-- -->LBD16 ------>MYB46(1)      --------->YAB1      --------->YAB1       ---------->DOF2    <---------DAG2 --LBD16  ------>MYB83--------->ANAC46 --------->ANAC58    <----------DOF2  <---------ANAC46<-------- -LBD16--------->MYB46(3)     <---------YAB1--------->ANAC58         --------->AtLEC2 --------->ZAT2-   catggaccaacctacataagctacgcggcagtatcatagtcgagccacgactattagaagcctttagaaccatggaaagcgtgtacccatctgccttttc  10081200                                                                     <---------ICU4                                                                     --------->YAB1             <----                                                                    <---------ATHB12            <---- ------>LBD16                               ------>MYB83          --------->YAB1                <---- -------LBD16               ----------->GT1 ------>MYB46(1)    ------>MYB83               <---------- --DOF2         --------->WRKY12           --------->WOX13(1)  ------>MYB46(1)           <---------TOE2(3) -------->LBD16<---------MYB52(1)    <----------DOF2         --------->MYB46(3)   <---------At4g35610   cccagagtatgacatccgttgaactagaagaagtaattcctttaccaatccatgcttcaagtacccactaatcatgtagttgtaagccgataatgttggc  10081300                                               --------->AHL20(2)                                               <---------AHL20(2)                                        ------->GAMYB                                  --------->ANAC58                                     ----------->GT1                                  --------->ANAC58                                 <---------ARR14(2)                                  --------->ANAC46                                 --------->ARR14(2) -----ANAC58            <-------TEIL    --------->RAP2.6(2)                        --------->GLK1(2) -----ANAC46         <---------ANAC46  --------->MYB46(3)                  --------->ARR11(3) -----ANAC58         <---------ANAC58 -------->P                      <---------WOX13(1) -RAV1(1)            <---------ANAC58--------->MYB52(1)    --------->ATHB12<---------ARR11(3)   ttgggtaattcgtcgaacacttggcgtgcataactcaagcaaccgcattttaaatgaagaatgagtagtttgatggatatattcaaatctggttgaaacc  10081400                    --------->ARR11(3)                    <---------ARR14(2)                    ------->TEIL                    <---------ARR11(3)       <------NtERF2                   <---------CCA1(2)        ----------->GT1               <---------ANAC58             --------->LBD16               <---------ANAC46             <------NtERF2               <---------ANAC58            <---------ANAC46          --------->ARR14(2)              <------NtERF2                   --------->LBD16          <---------ARR11(3)              --------->ATERF1(1)            --------->ANAC58          <---------ARR14(2)             ------>NtERF2                   --------->ANAC46          --------->ARR11(3)         <-----------RAV1(1)                 --------->ANAC58 <----------         <---------GLK1(1)        <----------DOF2                        --------->LBD16 <---------DEAR3(2)         --------->GLK1(1)  -------->P  --------->TCP20                 <---------LBD16 <---------DEAR3(1)        <---------ARR11(3) <-----------GT1<---------LBD16           <---------At4g35610<---------LBD16      <---------YAB1--------->ARR14(2)  <---------PCF2           ---------->DOF2 ------->TEIL   cagttttgatgatatctgcgtgtatcttcttaccagcttttggggccggagaattgatatgttcttgtaaagctcccgcaatgtatttcgccggtgagag  10081500                                                                               <---------ARR11(3)                                                                               --------->ARR11(3)                                                                       --------->ARR14(2)                                                                  --------->O2 <---------GLK1(2)                                                                  <---------O2 <---------ARR14(2)                                               ----------->ARR10  <---------TGA1a                                            <------NtERF2         --------->TGA1a                                           ------>NtERF2          <---------ANAC58                                          --------->ANAC46    <---------WOX13(1)--------->GLK1(2)                                   --------->ATHB12   <---------DEAR3(1)       --------->ARR14(2)                                   -------->HAHB4    --------->LBD16   --------->GLK1(2)         <---      <-------MYC3                 <--------ATHB1    <---------LBD16   <---------ARR14(2)    --------      ------->MYC3                 <---------ICU4--------->ARR14(2)    ------->TEIL     <---------ANAC58     --------->ANAC58             <---------ATHB12 <---------LBD16<---------ANAC46      <---------ANAC58     --------->ANAC55(2)          --------->ICU4 --------->GLK1(2)<---------ANAC58    <---------YAB1     --------->ANAC58   --------->ICU4 ----------->HVH21--------->At5g28300  ----------->ARR10   ---- -HVH21            ------->GAMYB  <---------YAB1 <---------ARR14(2)   <---------CCA1(2)<---------ICU4   agaagacacgttttgtttcaacgggaatgttgagtaatgattcgacggcaaaatccgcggtgagattgacgtgaatctgaagattctcatgcttacatta  10081600                     <------------CBF                    --------->ATHB12          ----------->GT1                                                    <---------MYB52(2)          <---------ANAC58                                                 ---------->DOF2          <---------ANAC58                                            ---------->DOF2               -      <------------CBF       <----------DOF2                   <----------DOF2                     <- <---------ANAC46  --------->ICU4  --------->ANAC55(2)        <---------HSFC1(2)                   <- ------At4g35610   <---------YAB1  --------->ANAC46           --------->HSFB2a(1)                 <-- ->TOE2(3)<---------ANAC46   <---------DAG2                   --------->HSFC1(2)                  <-- ----->At4g35610 ---------->DOF2 <---------ANAC46             <---------HSFB2a(1)                 <--   gctgtgtgaattgtgtgaataaagattgaaactttacgcgtaatttacagaggctctgtttcgaactttccaaaatgcaaagaacgagagagagagaagt  10081700     --------->ANAC58     ----------->HVH21     --------->ANAC58     --------->ANAC46 <---------WRKY38(1) <---------WRKY12 -------->WRKY18(1) -------ZAP1 ----------HVH21 ----MYB46(1)                                                                                   <---- ----MYB83           ------->TEIL               ------->TEIL                                    <---- -------DEAR3(2) <---------TOE2(3)          <---------TOE2(3)                            <---------YAB1   cggtcaaacgacagcgtttgatgtatttgataaaacgacagcgtttgatgtatttgataaaacgacagcgtttgatatagttgatatagttatgttttaa  10081800                               <--------P                       --------->TOE2(3)                       --------->TOE1(3)                      <---------------AGL15                      --------------->AGL15                     <-----------------AGL1                     ----------------->AGL1             <---------ANAC58                     <-----------------AGL3             <---------ANAC46                     ----------------->AGL2             --------->ANAC55(2)                     ----------------->AGL3      <---------AHL20(2)                     <-----------------AGL2     --------->AHL20(2)                     <-----------------AG     --------->TOE2(3)                                     <                     ----------------->AG <---------ATHB12                                       <---          <-----------HVH21  --------->YAB1--------->YAB1                                 --------->CCA1(2) -----TOE2(3)      <-----------GT1      --------->WOX13(1) <------------CBF         <---------STY1(1) -----TOE1(3) --------->ANAC55(2)     ------------>CBF  <---------ANAC58   <-----------HVH21     <---   ggttgaggcatatgtcatgtgttacccttaatggtagtttagcaatcacattaattttgcgtattgtaaacgaagagggtcagagcctagggatatagtg  10081900                                                      ----------->HVH21                                                    <---------ANAC55(2)                                                    <---------O2                                                    --------->TGA1a                                                    --------->O2             --------->YAB1                                                    --------->ANAC55(2)   --------->WOX13(1)                                               ----------->HVH21   <---------ANAC58                                               <---------ETT(2)    <---------ANAC46            ------->TEIL                     <---------At4g35610   <---------ANAC58 -----------HVH21                            =================MYC_MYB <---------ARR14(2) ------ANAC58                                <-------GAMYB  <----------DOF2 <---------ATHB12     <--- ------ANAC58                  <---------RAP2.3(3)  ===================bZIP_DOF                ------   agtgtcattccatgaacgcgaacacttaagatgagggctccatttgctgttgacatgtgacgctttgtagcgtttccaatcacgaagaacacgagtgaga  10082000                              <---------MYB52(1)                          <------NtERF2                          <---------ZAT2                  --------->TGA1a                          --------->At4g35610             --------->O2                          <---------At4g35610             <---------TGA1a                         ----------->RAV1(1)         ===============MYC_MYB                         ------------>AtMYB77        ------->GAMYB                             <-----                       <------NtERF2          ----------->HVH21                               -------                  --------->ALFIN1            <---------ZAT6                       <---------At4g35610            <------NtERF2===========================================MYC_MYB    --------->ARR14(2)     <----------DOF2   --------->ATERF1(1)  --------->MYB52(2)  <------ZmHOX2a(1)  --------->At4g35610 ---ZmHOX2a(2)  <---------ANAC46       <---------ORA47(1) <---------O2<---------ANAC58  --------->ARR14(2) --->At4g35610  --------->ALFIN1  <---------AtLEC2  --------->DEAR3(1)<---------ANAC58  <---------ARR14(2)   tcaaagactttggcagggatgtggaggcagcagttagcatggacggtagtgacaacgcccatgtgaggactgtcttggcaaaaaccgctgaattcggtgg  10082100  Previous    Next  AGI:  At1g28690.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G14820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48091.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 10080028    to: 10081590    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g28695.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G28700.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64421.1); contains domain PTHR10483:SF6 (PTHR10483:SF6); contains domain PTHR10483 (PTHR10483) Range:  from: 10081880    to: 10083108    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version