Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------MYB59                                                                --------->ARR11(3)             --------->ANAC58                                   <---------ARR11(3)         --------->ANAC58                                 --------->ANAC58         --------->ANAC46                                 --------->ANAC58                     <-----         --------->ANAC58                             --------->ANAC58                   <---------ARR14(2) <---------At4g35610                                  --------->ANAC46                   --------->ARR14(2) <---------ZAT2                                       --------->ANAC58            --------->MYB46(3)- --------->ZAT2               <---------ARR14(2) <---------At4g35610              <---------MYB52(2)- --------->At4g35610   ---------->DOF2      <----------DOF2 ---------->DOF2  <------ZmHOX2a(1) <----- -----GLK1(1)--------->ANAC58 --------->ARR14(2) --------->At4g35610---------->DOF2 --------->MYB52(1)   ttcagctgtccaagtaagaaactcagaaagcatatagggtttctaactttctgctcaagcaagaaagacctaaagcagaggagaacaaacgtttctgcct  10068800                      <---------ANAC55(2)                      <------MYB46(1)                               <------NtERF2                      <------MYB83                                 <------NtERF2                     --------->MYB59                           ------->GAMYB                     <---------------AtSPL8                   --------->MYB46(3)                --------->ICU4                               <---------At5g28300            ----------->GT1                                  --------->RAP2.6(3)     ---------->DOF2 --------->MYB46(2)             <---------RAP2.6(3)  --------->AHL20(2) <---------------AtSPL3         <---------SPL7 <---------SPL7                  <- ----MYB46(2)<------ZmHOX2a(1)  --------->DAG2     --------->DEAR3(1)      <------ZmHOX2a(1)   ------ -------->TOE2(3)    --------->MYB111(1)--------->YAB1      --------->MYB52(1)         <----------DOF2 -------->TOE1(3)    --------------->AtSPL8    <---------RAP2.6(2) --------->LBD16   <---------HSFC1(2) ----MYB59 ----------->GT1     ---------->DOF2--------->RAP2.6(3)<---------LBD16     --------->HSFC1(2)   aacattaaaaagagaggaaaaattaggtacctataaagtcgatgatgagacggccgtccgagtaacggccggagggaggatggaagaagctttcgccata  10068900                                                              <---------DEAR3(1)                                                             <------NtERF2                                                            <---------RAP2.3(1)                                                           <---------DEAR3(1)                                                           --------->ETT(1)                                                           <---------ANAC46                                                           <---------DREB2C(2)                                                           <---------At1g77200                        <-------GAMYB                      <---------RAP2.3(3)                       ----------->GT1                     <---------DEAR4(1)               <---------TOE2(3)                          --------->ATERF1(1)           <---------ARR14(2)                             --------->DDF1           --------->ARR14(2)                             <------NtERF2       <---------LBD16--------->ALFIN1                   <-----------HVH21     --------->DAG2 <------MYB46(1)                   --------->LBD16                  ------>ZmHOX2a(2)    ---------->DOF2 <------MYB83                    <---------LBD16                <---------YAB1   ---------->DOF2 <---------AtMYB61         <---------ARR11(3)               <---------At4g35610---- -----ZmHOX2a(1) <------ZmHOX2a(1)    --------->CCA1(2) --------->ALFIN1   ---------->DOF2       ---- --->ICU4 <------NtERF2<---------MYB46(3)----------->GT1----------->HVH21 --------->AtMYB61    XXXXXX   aggaagaaaggcggattgaggaaggtggttaacatcagagagatggagataatttccggtgtcggcgatggaatcaccaaagctgatgatcgatttaaaa  10069000                                       <---------------AtSPL8                               <---------AtMYB61                             <---------ICU4                       ----------->RAV1(1)                    --------->ANAC58 <---------ANAC46                 <---------REM1(1) <---------MYB46(3)               <---------At4g35610<---------AtMYB61           --------->GLK1(2) <--------ATHB1          <---------ARR14(2) --------->YAB1          <---------GLK1(2) <---------ATHB12  --------->ANAC58                                     --          --------->ARR14(2)--------->ICU4    --------->ANAC46                        --------->ANAC58   --------->REM1(1)--------->ANAC58 --------->ALFIN1                                 --------->ANAC58 ----->ANAC58  --------->At4g35610--------->ALFIN1                               <---------ZAT14 <--- ----->ANAC58 <---------YAB1<---------YAB1    --------->ANAC58                   --------->ZAT14 <--- XXXXXXXXXXXXXX>MIR161.1  --------->YAB1<---------ANAC46---------->DOF2<---------GLK1(2)        -----   cgcctacatcgagattctgatgaagcaacaatgatggtggtggagtacaagacaagtagaaagcttgaaataagcttctccagtgaagaagccatgggaa  10069100                                                                       <---------ANAC46                                                                     <---------MYB46(3)                                                                    --------->ALFIN1                                                          >>>>>>>>>>AGL20  --------->GLK1(1)                                                          >>>>>>>>>>AGL22  <---------GLK1(1)                                          --------->AHL20(2)   *TSS <---------AtMYB61         ---------->ID1          <-----------GT1          >>>>>>>>>>AGL24 >>>>>>>>>>GATA-1          < ------->GLK1(2)               <-----------GT1         --------------->AGL15                 ------->GAMYB ------HSFB2a(1)              <-----------GT1          <---------------AGL15                --------- ------HSFC1(2) <---------HSFB2a(2)       <---------AHL20(2)   <-----------HVH21           --------->ANAC58 ------>ARR10   --------->HSFB2a(2)   <----------DOF2 <-----------------AGL3               --------->ANAC58   gaatcgtcttcgtcgtttctgtaactcaatttttatcaccctttttaatttggaccactaaatatggtcagtggtggatttcatttactatgcaaccaag  10069200                                                             <------------CBF                                                            <--------ATHB1                                                            <---------ICU4                                                            -------->ATHB1                                                            --------->ATHB51                                                            --------->YAB1                                                           <---------ATHB12            ----------->GT1                                --------->ICU4                       -----     <---------ZAT14      <---------AHL20(2)               <---------ATHB51                     -----     --------->ZAT14     <---------AHL20(2)            ------------>CBF             --------->HSFB2a(2)  --------->YAB1    --------->AHL20(2)          <---------ANAC46                    <---------HSFB2a(2) ---------ZAT14     <---------AHL20(2)          <---------ANAC58          <---------ZAT18       ----- >MYB46(3)<---------LBD16--------->AHL20(2)     <---------ANAC58          --------->ZAT18    <-------TEIL   actatagtaaactggggaaaatataaattttttttgtttatgtttttttggtgtgtgatcaataattgtttgaaaatgcactagtttcagaaacgttcat  10069300              --------->ANAC58              <---------ANAC55(2)              --------->ANAC46              --------->O2              --------->ANAC55(2)              <---------O2                                                                     <-----              --------->ANAC58                                                                -------         --------->ANAC46                                                                     <------    ------->TEIL                                                                              <------ --------->ANAC55(2)      <---------AtLEC2     --------->GLK1(1)                            <-------- --------->O2 --------->TGA1a                 --------->ARR14(2)                           <---------AHL20(2) <---------ANAC55(2)    <---------YAB1        --------->GLK1(2)                     --------->ANAC58 --------->ANAC58 --------->DAG2<---------ARR14(2)                              --------->ARR11(3) --------->ANAC58 <---------TOE1(3)           ------->TEIL              <----------DOF2   --------->AHL20(2) ---->ANAC46  <---------TGA1a   --------->ARR14(2)                  --------->GLK1(2)    <---------MYB52(1) ---->ANAC58  --------->ANAC55(1) <-------TEIL<---------ARR14(2)   <---------GLK1(2)--------->ANAC46 ---->ANAC58  --------->bZIP60(2)--------->CCA1(2)               <---------TOE2(3)  --------->ANAC58   gccacgtatttaagacacgtaaggttatgcatgggatacacatagacgaatctccagtctataatctaagattcctttcgaatatcaggccattaatttt  10069400           <---------YAB1                     --------->AHL20(2)    --------->AtLEC2 ----AHL20(2)    <---------AHL20(2)           <---------AHL20(2)  <---------ANAC58 -->AHL20(2)     <---------YAB1        --------->AHL20(2)         <---------ANAC58                --- ---AHL20(2)    <---------AHL20(2)  --------->YAB1             --------->GLK1(2)                <---- ---AHL20(1)<---------AHL20(2)  <----------DOF2<---------AHL20(2) <---------ANAC46              <---- ---------AGL3  --------->AHL20(2)--------->AHL20(2)          <---------GLK1(2)          <----------DOF2   tttggatacaatttttattttaattcttcaagtgcttttaataaactattaatttgtaatccaagattccttgcaattctctgcaactcttctttttttc  10069500                                                      --------->ANAC58 ---------->DOF2            <----------DOF2           --------->ANAC58 ------>AtLEC2             <---------ICU4      ---------->DOF2              <------ZmHOX2a(1) -----ANAC58              <---------YAB1   --------->YAB1            ---------->DOF2 -----ANAC58            --------->YAB1    <---------ATHB12  <------ZmHOX2a(1)   ttgcaaaggccagagccactactaaatcatctttatccactgaaatcataagagccaaggcaggaccagtcgaaagcaggagttgtatagcgaccattga  10069600                                <-------GAMYB                               ----------->GT1                           <---------ANAC46                           <---------ANAC58                           <---------ANAC58                      ==================MYC_MYB                      <---------ANAC55(2)                      <---------TGA1a                      <---------ANAC58                      --------->ANAC55(2)                      <---------ANAC46                      <---------ANAC58         ------>MYB46(1)                     <-------TEIL              ------>MYB83                 <---------HSFB2a(2)         --------->AtMYB61                 --------->HSFB2a(2)         ------->GAMYB                                          -    ============================MYC_MYB     --------->MYB46(3)                     <---------MYB59 <-    <----------CDC5<---------MYB52(1)  --------->YAB1  <-----------GT1--------->ARR11(3)        <----   ----------->RAV1(2)<---------bZIP60(2) <-----------GT1            <------ZmHOX2a(1)      <--------   gtaaaccctgagccatcttctggtacgtggcttcggttaaatgataaccatcccaattcacatactcagaaggattttgacaatagctaactccgttttc  10069700  Previous    Next  AGI:  At1g28640.1    Description:  GDSL-motif lipase, putative. similar to lipase, putative [Arabidopsis thaliana] (TAIR:AT1G28650.1); similar to ARAB-1 (Arabidopsis lipase), carboxylesterase [Arabidopsis thaliana] (TAIR:AT1G28670.1); similar to lipase, putative [Arabidopsis thaliana] (TAIR:AT1G28660.1); similar to lipase 2 [Brassica napus] (GB:AAX58135.1); similar to lipase 2 [Brassica napus] (GB:AAX62802.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087); contains InterPro domain Esterase, SGNH hydrolase-type (InterPro:IPR013830) Range:  from: 10067549    to: 10069163    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g28650.1    Description:  lipase, putative. similar to GDSL-motif lipase, putative [Arabidopsis thaliana] (TAIR:AT1G28640.1); similar to ARAB-1 (Arabidopsis lipase), carboxylesterase [Arabidopsis thaliana] (TAIR:AT1G28670.1); similar to lipase 2 [Brassica napus] (GB:AAX62802.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 10069351    to: 10071068    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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