Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   -------->AHL20(2) ------->ATHB1 -------->ATHB51 --------ATHB51                                                           <---------YAB1 --------ATHB12                                                           --------->AtLEC2 ------->ICU4                                                          --------->WRKY18(1) ----->WOX13(1)          ----------->GT1   ---------->DOF2            <-----------HVH21<-------------   aattattcatatgtgtttttgtaagaagggtgaaaccaaaatagagaaagtctatggagctagacttgaacaggtcatgctaatccaaaatagtacatgc  10043700                                                                          <------ZmHOX2a(2)                                                                          --------->CCA1(2)                                                                         <---------ARR14(2)                                                                         <---------ARR11(3)                                  <---------ICU4                         --------->ARR14(2)                                  --------->ATHB51                       --------->ARR11(3)                                  <---------AHL20(2)                     <---------AGP1                      <---------ANAC58     ---------->DOF2  ----------->GT1------>ZmHOX2a(2)        --------->HSFB2a(2)       --------->AHL20(2)      --------->SPL7 --------->AGP1        <---------HSFB2a(2)      --------->ICU4         <---------SPL7 ----------->ARR10     <-------    <----------DOF2   <---------ANAC46    <------ZmHOX2a(1) <---------ANAC46           --------->TOE2(3)    <---------DAG2    <---------ANAC58 <---------LBD16<---------------AtSPL3   ------->TEIL  -------- --AtSPL8       <---------YAB1   <---------YAB1       --------------->AtSPL3  <---------GLK1(2)   tcccaactttttggaactatttttgtgtggatgtaattatttcaggaaagtctctggtcgtaccgtattaactaagatctgaatctctaccttcgtacac  10043800                                                                                 <------MYB83                                                           <---------MYB52(1)    <------MYB46(1)                                                         <---------MYB46(3)      <---------MYB46(3)                                                       --------->ATERF1(1)      <---------AtMYB61                                                       <------NtERF2            --------->ALFIN1                                                       ------>NtERF2          <-------GAMYB                                                      ------>NtERF2 --------->MYB46(3)                                                      <---------ATERF1(1)    <---------MYB46(3)                                                      <---------RAP2.3(1)    <---------DEAR3(2)                                                     <---------RAP2.3(2)     <---------SPL7         <                                                     <---------RAP2.6(2)  <---------MYB52(1)        <                                                     --------->ATERF1(2)  <-----------HVH21      <---                                                     <---------ATERF1(2) <---------SPL7         <----                    ---------->DOF2                  <---------DEAR3(1)  <---------DEAR3(2)     ----- --ZAT18          <---------MYB52(2)<---------ATHB12--------->ATERF1(1) <---------MYB46(3) --------->HSFB2a(1) ->ZAT14  <---------ALFIN1     ------->TEIL   --------->YAB1      --------->MYB52(1)       <---------HSFB2a(1)   actctctcactcacacttcaactaaagaaaacgtaccaatgaaatcgatgatgaggcggccgtttgagaaacggccggtcggatggtggaagaaggtttc  10043900            --------->ANAC46            --------->ANAC58         <---------ARR14(2)         --------->ARR14(2)    ----------->GT1   --------->ANAC58                                                <------NtERF2   --------->ANAC58                                              --------->ETT(1)  --------->SPL7                      ------>ZmHOX2a(2)       --------->ALFIN1  --------->SPL1(2)                 <---------ARR14(2)    <-----------------AGL1 <---------SPL1(1)                  --------->ARR14(2)    ----------------->AGL1 <---------MYB52(1)                <------ZmHOX2a(1)     >>>>>>>>>>>>>>>>>LFY             -------->HAHB4 --------->SPL1(1)                <------MYB83        --------->HSFC1(2)        --------->ANAC46 ---------SPL1(2)                 <------MYB46(1)     <---------HSFC1(2)  <---------GLK1(2)  ------>ZmHOX2a(2) ---------SPL7  ------>NtERF2   <--------P       --------->ANAC58--------->ATERF1(2)      --------->ATHB12 ---------------SPL14         <------MYB46(1)    --------->ANAC58<---------At1g77200     --------->ICU4 -------GT1 --------->ANAC58  <------MYB83     <---------ANAC58  <---------ANAC46        <---------YAB1 ------------->SPL14        <---------WOX13(1) <---------ANAC58 --------->RAP2.6(3)      <---------ATHB12   tccgtacggtagaaacgcgaccttagggagattggtaggatcggagagggcgagcaagtttccagtgtcggcaatagaatcgccgaaactaatgatcgat  10044000                              --------->ZAT14                              <---------ZAT14                            --------->ZAT6                         <---------ZAT14                         --------->ZAT18                                                           <-                         --------->ZAT14                                 --------->ZAT2           <--            <-----------RAV1(1)            --------->DAG2                --------->At4g35610      ---    <---------ICU4   --------->LBD16      ---------->DOF2        <---------At4g35610           ------   <---------ATHB51<------NtERF2    <----------ID1               --------->At4g35610          -------   --------->ICU4<---------PCF2   <---------ZAT6           ---------->DOF2  <-------TEIL      <------   ttgaaattatggcactgtggctccgagttcacagtagtgagacaaaaagtagatagaattagaaagaagctcaccagcttcatgaacagagtagccatga  10044100                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                             --------    <---------ANAC46                                                                         <-------   <------NtERF2                                                                             <------- <---------RAP2.6(2)                                                                     <------ZmHOX2a(2) --------MYB46(3)                                                                        ------------ -------AtMYB61                                                                         --------->ARR11(3) ------>ALFIN1                   <----------DOF2                                        <---------ARR11(3) --->ATHB12                      <---------DAG2                     ---------->DOF2 ---------->DOF2-- -->ICU4                         *TSS   ---------->DOF2        ------------>CBF <----------ID1------- ---YAB1                   <---------ICU4          --------->ARR14(2)<---------------AtSPL8--------->WOX13(1)   gtggtggcctagaggttagaaacttttcaaaatgactttttggaaagagccactattcgctcggagacaataaagtccaaaaaaaacaaagatcaattat  10044200  <-------TEIL  ------------>CBF -->YAB1                           <----------DOF2 --HAHB4                      <-----------RAV1(1) -->ATHB51                <---------------AGL15 -->ATHB12                <----------DOF2 ---ICU4                 <-----------------AGL3 ->ICU4                --------->ARR11(3) --ATHB12              --------->ARR14(2)                              <----------DOF2 --ATHB51              <---------ARR11(3)                       <---------WOX13(1) >CBF                  <---------ARR14(2)                     --------->ATHB12 ------->At4g35610    <---------GLK1(1)                      --------->ICU4       <-----------GT1 ->ATHB1              --------->GLK1(1)       --------->ZAT18<---------YAB1    <---------ICU4   tagatgcaatagagactagacagggtatctttatgtggtttagggatgggcacaaatgagagcatgattgtctctttctcatttttgccattttccaaac  10044300                                                                                                    <                                                                                                  <--                                                                                                  <--                                                                                                 ----                          --------->AHL20(2)                                                   <-----                          <---------AHL20(2)                                                   ------                          --------->AHL20(1)                                                  <------                         --------->AHL20(2)                                                   <------               <---------O2         <-----------GT1        --------->MYB46(3)                <-------     --------->MYB46(3)  <---------AHL20(2)  ----------------->AGL1     <---------AHL20(2)   <-------   tgaatcaacaaatgttcacttggctaaataatttgtttttgccattttccaaattgaatcaacaaatattccaatttatctccaagttttcaatgccgtt  10044400     --------->ANAC55(2)     <---------ANAC55(2)     <---------ANAC58     <---------ANAC58    --------->MYB52(2)  --------->ARR14(2)                                           --------->ANAC55(2)  <---------MYB52(1)                                    --------->ATHB51 <-------GAMYB                                          --------->AHL20(2) ---------DEAR3(2)           <---------ZAT14            <---------AHL20(2) -------LBD16                <---------ARR14(2)         <---------ICU4 -------ANAC46            <---------ANAC46             --------->AHL20(2) -------->AtMYB77       <---------ZAT14                <---------AHL20(2) ----MYB52(1)           --------->ZAT14             --------->AHL20(2) --->ATERF1(1)          --------->ZAT18             <---------AHL20(2) -GAMYB<-----------GT1 --------->ALFIN1         <----------DOF2--------->ANAC46                   --- ---At4g35610        <---------ANAC58      <-----------GT1   <-----------GT1                   ------ --ANAC58            <---------ANAC46   <---------YAB1 <---------AHL20(1)                      ====== --ANAC58            <---------ANAC58------->TEIL  --------->AHL20(2)    <---------YAB1 ------->TEIL   gccggttacttactctctatatggagtggagtatacatgaacatgatacccttttaaattatttcacataacaacatgatacaatacatgaacatgatcc  10044500                                         <-----------GT1                                     ------>ZmHOX2a(1)                                     <----------DOF2                                                >           <------ZmHOX2a(1)     <---------ARR14(2)      -------->P                              ----         <---------TOE2(3)       --------->ARR14(2)      ------>MYB46(1)                       <-----     --------->YAB1         <---------YAB1               ------>MYB83             --------->GLK1(1)-- ------>ANAC46             <-----------GT1     <---------AHL20(2)            ---------->DOF2   ------ >ZmHOX2a(2)     <-------TEIL    <---------ARR11(3) <-----------GT1     <---------------AGL15<------- =================HOX2a_HOX2a--------->ZAT6    --------->AHL20(2)   <---------GLK1(2)      <---------   aagacaatactaaggaacatacatgtttttatcagtatccttttctcaattttttgaccaacttgtatcagtttctcatcaaagaattctatgtgtcaga  10044600  Previous    Next  AGI:  At1g28570.1    Description:  GDSL-motif lipase, putative. similar to GDSL-motif lipase, putative [Arabidopsis thaliana] (TAIR:AT1G28580.1); similar to lipase 1 [Brassica napus] (GB:AAX59709.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087); contains InterPro domain Esterase, SGNH hydrolase-type (InterPro:IPR013830) Range:  from: 10041627    to: 10044133    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g28580.1    Description:  GDSL-motif lipase, putative. similar to GDSL-motif lipase, putative [Arabidopsis thaliana] (TAIR:AT1G28570.1); similar to lipase 1 [Brassica napus] (GB:AAX59709.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 10044323    to: 10046428    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version