Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->TOE1(2)               <---------ANAC58               --------->O2               --------->TGA1a               <---------ANAC46           <---------MYB46(2)      --------->At4g35610      <---------At4g35610   <---------At5g28300  <-----------GT1 -------YAB1 --------->MYB52(1)                                                   --------->GLK1(1) ------AHL20(1)<---------TGA1a                                            <---------ZAT14 ------AHL20(2)<---------O2                                               --------->ZAT14 ----->AHL20(1)<---------ANAC58                                           --------->ZAT18 --RVE1(1) <---------MYB59                                                <---------ZAT18  --------->ZAT6 --CCA1(1)----------------->AGL1                            <-----------GT1       <---------GLK1(1) -ARR11(3)<---------ANAC58                 --------->YAB1<---------AHL20(1)    --------->LBD16     -- >ARR11(3)<---------ANAC58  <---------AtLEC2             <---------ARR11(3)  <---------LBD16       <-   atatttacagttgcctaacgtgagaagtttgcataacaaaactaatcacaaactcacaatatataccattcttctgtgcaccggaaatctataacactta  10015500                                                         --------->AHL20(2)                <--------HAHB4                                                         <--------HAHB4                    --------->ATHB12                                                         <---------AHL20(2)                <---------ICU4                                                         -------->ATHB1                    --------->YAB1                --------->TOE2(3)                        --------->ATHB12                 <---------ATHB12                --------->TOE1(3)                        --------->ATHB51               --------->WOX13(1) --------->TOE2(3)                                       <---------ICU4      <------ZmHOX2a(1) --------->TOE1(3)                                      <---------ATHB51  --------->HSFB2a(2) ------->ARR11(3)                                       --------->ICU4    --------------->AGL15 --------ARR11(3)         <-----------GT1    ----------->GT1              <---------HSFB2a(2)  ------   aaatcttaaatgtgtaaaccctaaaattttaccatacaatttttgaattgagaaaacaattatttgtttttggtttctaggattagtaaacaatcattta  10015600                                                                 ------>MYB83                                                                 ------>MYB46(1)                                                                ----------->RAV1(1)                                                              --------->MYB46(3)                        <---------YAB1                   <----------DOF2                         <---               <---------AtLEC2                       --------->ANAC58                           ----         <---------ARR14(2)                           --------->ANAC58                    <----------DOF2         --------->ARR14(2)                       <-----------HVH21                 ----------->GT1 - --->YAB1<---------GLK1(2) ------->TEIL         --------->MYB59------->GAMYB        <---------MYB46(3)   tagtagcatcggatttttcatggactatgaatcttctcaatagacagacttaggtcacgctttaaccaacaaaaactcagcaagagtggtttctttcttc  10015700                                                      --------->YAB1                                                   <---------ICU4                                                   --------->YAB1                              <-----            --------->ARR14(2)                    --------->ICU4                            <--------            <---------ARR14(2)           --------->YAB1                                --------->YAB1 ------HSFB2a(2)            <-----------GT1 ----------->GT1                      <----------DOF2  <-- ----->HSFB2a(2) <---------ANAC58     --------->HSFB2a(2)          ----------->GT1--------->ICU4  <-- -------->YAB1   <---------ANAC58     <---------HSFB2a(2)          <---------ANAC46  <---------YAB1 <   tataacaaatgccaaatatgcgtttcaatataaccattttctataacagttaataatcaaaattttgtaacgtagaaaatggtctttattaatactgtcg  10015800                                                                                                 ----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                        ---------->DOF2                                                                                   ------->TEIL------         <-----------GT1                                                           <---------ARR11(1)      --------->YAB1                                                               --------->GLK1(2)   ----------->GT1                               <---------ARR14(2)                --------->ARR14(2) ----ANAC46   <------------CBF                   --------->ARR11(3)                <---------ARR14(2) ---RAV1(1)  --------->ATHB12                    --------->ARR14(2)               <---------ARR14(1) -------TOE1(2)                   <------------CBF--------->GLK1(2)            <---------At4g35610--- -------TOE2(2)        <-----------RAV1(1)       <---------GLK1(2)         <-----------HVH21  ------- ---------ARR14(2)   <----------DOF2     <----------DOF2           --------->YAB1 <---------CCA1(2)<-   tagatttgtaataacttattgggctctgtggtctcttattgggctttataagattctccagtagcccaaaaataaactttcagcgaatctcaaagccaac  10015900                                                                                   <---------ALFIN1                                                                                  ----------->HVH21                                                                                 <-----------TGA1                                                                                <---------O2                                                                                <---------bZIP60(1)                                                                                --------->bZIP60(2)                                             --------->GLK1(2)                  --------->O2                                            <---------GLK1(2)                   --------->bZIP60(1)                                           <------NtERF2                        --------->TGA1a                                          --------->LBD16                       <---------TGA1a        <---------ANAC46                 --------->RAP2.6(2)                    <---------ANAC55(2)        <---------ANAC58                 --------->LBD16                        <---------ANAC58   --------->ALFIN1                   <---------O2                              --------->ANAC55(2)   ----------->HVH21                  <---------TGA1a                        <---------MYB52(1) <---------At4g35610                  =======================bZIP_DOF       <-----------HVH21 <---------ZAT2                       --------->TGA1a               <---------MYB46(3) --------->At4g35610                  --------->ANAC46             <---------TOE1(2) --->GAMYB                            --------->O2   <-----------GT1--------->MYB52(2) <----------DOF2 ---->MYB46(3)                        --------->ANAC58       --------->DEAR3(1) ==================bZIP_DOF >MYB46(1)                            --------->ANAC58     <---------At5g28300  ===================== >MYB83 <---------ANAC58        <-----------ARR10 <----------DOF2 <---------MYB52(1)  <---------DAG2 -->P*TSS                       ------->TEIL<---------ARR14(2) <---------MYB52(1)<-----------HVH21 ------>LBD16                   --------->GLK1(2) ========================================bZIP_DOF -->MYB52(1)               --------->CCA1(2)--------->ARR14(2)<-----------HVH21 <---------ANAC58   -- ----------RAV1(2)        <----------ID1<---------LBD16  <---------ZAT14   --------->ANAC46   -------   cgcaggtgatgcgttttgctatgtaagagagacgaatctcacgccggaatctcttttacttcaccgtcgtttgttctccgtcgcgtcacctttcgattaa  10016000                <---------HSFC1(2)                --------->HSFC1(2)                <---------HSFB2a(1)                --------->HSFB2a(1)                <---------At4g35610           --------->ANAC58                                            <---------DOF5.7(2)<----------DOF2           --------->ANAC58                                          <---------MYB52(1)--------->ANAC58         <--------P                                                  --------->DOF5.7(2)  <---------DAG2      <---------TOE2(2)               --------->TOE2(3)       <---------ANAC58         --------->ANAC58 <-----------HVH21                   --------->REM1(1)        <---------ANAC58     --------->ANAC58 =================MYC_MYB       ------>ZmHOX2a(1)<----------DOF2  ---------->ID1   --------->ANAC58 --------------->AGL1       <-----------GT1  <-----------GT1 ------>ZmHOX2a(2)     --------->ANAC46 -->AHL20(2) <------ZmHOX2a(1)  ====================================HOX2a_HOX2a <---------REM1(2)  --   ttccttcacaggtaaggaagcttcttcaattttcctcttacatcaattctcctttcgcattgatccttgtcgttatcgtctctaaacgcaagctttttct  10016100                                           <---------LBD16                                         <---------ARR14(2)                                         <---------MYB52(1)                                         --------->ARR14(2)                                        <---------RAP2.6(3)               <---------GLK1(2)              ------>ZmHOX2a(2)         <---------SPL7               --------->TOE1(3)        <------            <---------ARR11(3)     --------->DAG2          <---------AHL20(2)              --------->YAB1            --------->ARR11(3) --------->YAB1--------->LBD16        --------->ZAT6     <---------AHL20(2) <---------ATHB12---------->DOF2  ---------->DOF2         --------->AHL20(2)       ================== ------------------->WRI1    <---------WOX13(1)           <---------AHL20(2)       <------ZmHOX2a(1)   ccaatgtttgtgtcgatcttaaagcacatagattgataaagccgttccggttctattgaataaaattctaaccctagattagccaggatttaatcggaat  10016200                                                                                     --------->KAN4(1)                                                                                     <---------KAN4(1)                                                                                --------->HSFB2a(2)                                                                                <---------HSFB2a(2)                                                                               <---------LBD16                                                                            --------->At4g35610       ------>ZmHOX2a(2)                                                   ------->TEIL     <---------AGP1                                                        --------->ARR14(2)     <---------ARR11(3)                                                 <---------ANAC58     --------->ARR14(2)                                                 <---------ANAC58     <---------ARR14(2)               <---------ANAC46                 <---------LBD16--------->KAN4(2) <---------LBD16              <---------ICU4 --------->GLK1(1)  <---------TOE1(2)--------->LBD16 ---GLK1(2)                   --------->ATHB12--------->ZAT6 --------->YAB1<---------ARR14(2)     <-- =============HOX2a_HOX2a    <---------YAB1<------ZmHOX2a(1)<---------ATHB12--------->GLK1(1)------>NtERF2   ttctctggatctaatagttttgtcgagtttgatcattgtgacttaggaactctaattttgcaatcgtagaatttgcgcatctccagaacaatccctgcca  10016300                              <---------MYB111(1)                              <---------MYB59                              <---------MYB52(2)                                <---------ANAC46                              <<<<<<<<<<AtMYB44                                 <------MYB83                              <------------MYB.PH3(2)                           <------MYB46(1)                              <---------MYB46(2)                    <---------ZAT2   <---------ARR14(2)                         --------->HSFB2a(2) --------->ARR11(3)     --------->ZAT2<---------ANAC46 --------->At4g35610     <---------HSFB2a(2) <---------ARR11(3)     --------->At4g35610     --------- -------ATHB12  --------->GLK1(2)  <----------DOF2                  <---------At4g35610    <--------P   atgagatgaaatttcaaaattctgtttctgtaactaactttgcataagaacttgtttctatagcttaatcagctgtgttatttggtgtatagggtagcaa  10016400  Previous    Next  AGI:  At1g28490.1    Description:  SYP61 (SYNTAXIN OF PLANTS 61). Identical to Syntaxin-61 (SYP61) [Arabidopsis Thaliana] (GB:Q946Y7;GB:Q8VYF3;GB:Q9SGP7); similar to protein binding [Arabidopsis thaliana] (TAIR:AT1G27700.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72346.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain Syntaxin/epimorphin, conserved site; (InterPro:IPR006012); contains InterPro domain Syntaxin 6, N-terminal; (InterPro:IPR015260); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 10015905    to: 10018033    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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