Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                           --------->TOE2(3)                                                                                    --------->ATHB51                                                                                    <---------ICU4                                                                                    <--------HAHB4                                                                                   --------->ICU4                                                                                   <---------YAB1----                                                                                 --------->YAB1 <----                                          --------->ANAC58              <---------YAB1    --------->YAB1                                          --------->ANAC58             <---------ARR11(3)<---------TOE2(3)               ----------->GT1       <----------DOF2   --------->AHL20(2)       <-------TEIL --------            --------->MYB52(1)   <-----------GT1     --------->AHL20(2)--------->ARR11(3)<---------YAB1     ----------->GT1   ----------->GT1    --------->ANAC46          <---------GLK1(2) <---------YAB1   ttctctacagaaaaaaacagaaaattggtataaataaaccttttacgcaaaaaaaaaaaatataagttcagaatatcatacattcattattaacataaaa  10005800                                                                                        <---------ATHB12                                                                                   ------>MYB83                                                                                --------->HSFB2a(1)                                                  --------->YAB1                --------->HSFC1(2)                       --------->HSFB2a(2)        --------->AtMYB61             <---------HSFB2a(1)         ---------->DOF2                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  ------>MYB46(1)        <---------WRKY45--------->LBD16  <---------YAB1                         <---------HSFC1(2) ---->ARR11(3)         --------->ANAC46--------->YAB1                         ------->GAMYB ----->RVE1(1)         <---------HSFB2a(2) --------->WOX13(1)                --------->MYB46(3) -----ARR11(3)        <---------LBD16 --------->ICU4         --------->LBD16 <---------MYB111(2) ->AHL20(2)        --------->REM1(1)  <---------YAB1       <---------LBD16 <-----------GT1--------->TOE2(3)   tctcttctagtcaaagtctctacatccggaattaagagttattatcaatcgaccataactatgcggataacaaatattaacaaccttccaaacattaatc  10005900                          --------->ARR11(3)                    --------->TOE2(3)                    --------->TOE1(3)              <--------HAHB4              --------->ATHB51              <---------ICU4             --------->ICU4                          --------->ANAC46             <---------YAB1--------->RVE1(1)         <---------HSFB2a(2)           --------->YAB1 <---------ARR11(3)         --------->HSFB2a(2)        --------->AtMYB61          <-------TEIL --------->AHL20(2)           <---------LBD16             --------->YAB1  <---------YAB1 <-----------GT1                 --------->REM1(1)      <---------AHL20(2) --------->ARR11(3) --------->YAB1     ---------->DOF2              <---------YAB1         --------->LBD16 <---------ARR11(3)<---------YAB1     <---------WRKY45--------->LBD16  <---------YAB1    <---------LBD16   taatatcatacattcattattaccataaaatctcttctagtcaaagtctctacatccggaattaagagtttttattaatcgaccataactatgcggatta  10006000             ------>MYB83             ------>MYB46(1)          <---------HSFC1(2)          --------->HSFB2a(1)          <---------HSFB2a(1)          --------->HSFC1(2)                                                                       --         ------>MYB83  --------->AHL20(2)                                                          --         ------>MYB46(1)                                                                         <---         -------->P    <---------AHL20(2)  <---------AHL20(2)                                   -----       --------->MYB46(3)       <------------CBF                                                -----       <---------MYB111(1)   <---------TOE2(3)                                         <---------CCA1(2)       <---------MYB46(2) <---------AHL20(2)              <-----------GT1            <---------DAG2--       <---------MYB111(2)--------->AHL20(2) <---------TOE2(3)       <-----------GT1 --------->TOE1(3)       <---------MYB59--------->AHL20(2)  <---------AHL20(2) <-----------GT1         --------->TOE2(3)    <-----------GT1 --------->TOE2(3) <----------DOF2<---------AHL20(2)           <-----------GT1---- <---------ICU4   <---------ATHB12    <---------DAG2 --------->AHL20(2)       ----------->TBP   -----   caaatattaccaaccttccaaacattaatttaagaattgacttttttaatgaaatttaaattactaccatttttccatctatataaaccttatcttgcac  10006100                                                                                              <------ --------->RAV1(1)                                                                           -------- ---->MYB46(1)                                                                              <-------- ------MYB55(2)                        --------->YAB1                               <---------ATHB12 ---->ANAC58              --------->ANAC58                                      --------->MYB46(3) ---->ANAC46              --------->ANAC58--------->YAB1                      <-----------GT1<------- ---->MYB83             ---------->DOF2--------->WOX13(1)                  --------->YAB1   --------- ----->MYB46(3)  <---------ANAC58     --------->MYB46(3)         <----------DOF2------------>CBF ---->ANAC58     <---------ANAC58    ------------>CBF  --------->AHL20(2)<-----------TBP  --------->YAB1   ccaacaaaaaaaacatattccttggctaaagccaaaaacaacaatcacatacttagtttaaatttctctttttttttttataaccaataaactcataatt  10006200                                                                                    <-----------HVH21 ------CBF                    --------->MYB52(1)                                  ------>ZmHOX2a(2) ->ATHB51                  >>>>>>>>>MYB2                                        --------->ARR14(2) -YAB1                --------->ANAC58                 --------->ANAC58         <---------ARR14(2) --ICU4               --------->ANAC58   ---------->DOF2          ---------->DOF2<------ZmHOX2a(2) >ICU4          ------->TEIL  ---------->DOF2          --------->ANAC58<---------REM1(1) <---------GLK1(2)   gtttttttctccaaaatgaatcccaagaaaaccaaaggaaaacaaaagattaacatcaagaaaattgaaaaagatgaaggcagatcggtcacattctcta  10006300                                                            <---------ANAC46                                               <---------ANAC46                                              <---------AtMYB61                   <---------HSFB2a(2)                                 <----------DOF2 <---------ANAC46        <---------YAB1          <---                               --------->At4g35610          <---------ANAC58      --------->HSFB2a(2)                --------->ZAT6 <---------At4g35610          <---------ANAC58     <---------LBD16 <---        ----------->GT1      <---------ZAT18<-----------RAV1(1)    <---------ANAC46    XXXXXXXXXXXXXX   agcgtctaaatggtatctacactaaaatcagtgagctttctattctctgtggtgttgaagttgcgtttatcgggtattcttgctctggaaaaccatacac  10006400                            <------NtERF2                            --------->ATERF1(1)                          <---------DEAR3(1)                          <---------ANAC58                          <---------ANAC46                          <---------ANAC58                         <------NtERF2                         <---------LBD16                       <---------DEAR3(1)                       --------->ALFIN1                       ----------->HVH21               ---------->ID1           --------->ICU4                      <-----------HVH21          ------>NtERF2         <---------ICU4                     <---------ANAC58         <---------ATERF1(1)      --------->ATHB12                     <---------ANAC58        <---------DEAR3(1)       --------->ICU4        ---------                  --------->ANAC46         ------->GAMYB              <---------YAB1        --------- -------DOF2      --------->ANAC58      --------->MYB52(1)          <---------ICU4          --------- ------DAG2  ------>ZmHOX2a(1)    <---------ARR14(2) --------->bZIP60(2)        <---------YAB1  ----- XXXXXX>MIR407    --------->ANAC58--------->ARR14(2) --------->O2   --------->YAB1 ------->TEIL -----   ttttggcagtccatccttccaagccgtggcggagcggtttctcaacggcgatgcctcgtcgtcttcttcatcatcattggtcatgaatgctcacaagcaa  10006500                                                                                           <---------ARR14(2)                                                                                          <------NtERF2                                                                                          --------->ATERF1(1)                                                                                         --------->LBD16                                                                                        <---------ANAC46     <-------TEIL                                                                      <---------LBD16    --------->CCA1(2)                      ----------->GT1                       <-------TEIL <------ ----------->ARR10                        <------ZmHOX2a(1)                   <---------At4g35610 >ANAC58                           <------MYB83                               --------->At4g35610 >ANAC58  --------->ARR11(3)       <------MYB46(1)                            <---------ZAT2  ======= >ANAC46  <---------ARR11(3)      <---------AtMYB61            ---------->DOF2--------->ZAT2  <------ ---->ANAC58                     <---------WOX13(1) --------->ALFIN1          <------NtERF2--------->ARR14(2) ---->ANAC58 <----------DOF2   --------->ATHB12---------->DOF2 ======================================   gcgaagattcaagagctttgcaaaaaatacaatagattggtggaggagttaaaggtggacgaagtcaaagtcaagaaggcagctgcattggcggagacga  10006600                                        <---------ANAC58                                        --------->bZIP60(1)                                        <---------bZIP60(1)                                        <---------O2                                        <---------TGA1a                                        --------->TGA1a                                        --------->O2                                        <---------bZIP60(2)                                        <---------ANAC55(1)                                        ==========================bZIP_DOF                                        --------->ANAC55(2)                                ======================HOX2a_HOX2a                                ------>ZmHOX2a(2)   --------->ANAC58                               =======================HOX2a_HOX2a                              --------->ARR14(2)    <---------ANAC55(2)                       ---------->DOF2  <---------ANAC55(2)                    <---------ANAC46    <---------ANAC46               --------->ALFIN1<------ZmHOX2a(2)    --------->ANAC46           ===========================HOX2a_HOX2a<------ZmHOX2a(2)           ============================HOX2a_HOX2a  --------->ANAC58           <------ZmHOX2a(1)  <---------ARR14(2)--------->ARR11(3) ----------->GT1  ----------->GT1       ==========================bZIP_DOF <---------ANAC58 <---------ANAC46      <---------ANAC58 <---------ANAC46--------->ALFIN1      ----------->STF1  --------->DAG2 <---------ANAC58<---------AtMYB61   ----------->TGA1   ---------->DOF2 ---TGA1a<---------TOE2(3) --------->ALFIN1    <------ZmHOX2a(1) =================================bZIP_DOF----------->HVH21                                    ------ ---O2  --------->YAB1 ===========================bZIP_DOF           <---------YAB1           <------ ===bZIP_DOF   <-----------RAV1(1)   ----------->HVH21 ---------->DOF2                 <---------ARR11(3)   gggtcgtgaataaggatgtgtggtggaaagtggatccaaatgacgtgaaggatcacgaaaaggcgaagaagatgatggagaagtatcaagagctctatga  10006700  Previous    Next  AGI:  At1g28460.1    Description:  AGL59; DNA binding / transcription factor. similar to AGL58, DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G28450.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66899.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) Range:  from: 10006216    to: 10006764    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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