Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->YAB1                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(1)                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(1)                                                                               --------->YAB1                                                                              <---------YAB1                                                             --------->YAB1   --------->ICU4                                                             <---------ICU4  <---------AHL20(1)                                                        --------->AHL20(2)   --------->AHL20(2)      ----------->HVH21                            <---------WOX13(1)        <---------AHL20(2)  <---------YAB1              --------->ARR11(3)<---------AHL20(2)           --------->AHL20(1) -->ZAT6                  ---------->DOF2       <---------YAB1              --------->YAB1        ---   taatatgagtgacacaagctgattttttcaaagaaattgtactagatgatataattgataaaatcataactaagaaaattataattaattagaacagtag  9963200                                                                                                   --                              --------->MYB52(2)                            <-----------GT1      ----                           --------->TOE2(3)                        <---------At4g35610         <----                 --------->TOE1(3)                              <---------ARR14(2)             ------                 --------->TOE2(3)         <----------ID1       --------->ARR14(2)             <-----   --------->ZAT6--------->YAB1 <---------ZAT6                  --------->GLK1(2)     ------>ZmHOX2a(1) ------>ANAC46--------->YAB1<---------MYB52(1)       <----------ID1 --------->At4g35610       -------   acatcacactagacaataaccataaacttcgttagtgttagaaattggacaaaaaactacaaaacaaatctgctgattttacatagtcctagtcaaatat  9963300                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                <----                                                                                          -----------                                                                                          <------MYB46(1)                                                                                          <---------ANAC55(2)          --------->MYB52(1)                                                              <------MYB83         --------->AHL20(2)                                                               --------->ANAC55(2)    <---------MYB59                                                                      <---------TOE2(3) ------->At4g35610    --------->ZAT18                                                    --------->MYB59 ----->YAB1<---------At5g28300     --------->TOE2(3)                                     --------->MYB46(2) -----YAB1<-----------GT1      --------->MYB46(3)                                 <-----------------AG --->ARR11(3)         <---------ZAT18                                           <----------ID1  <---- ----ARR11(3)------->GAMYB------>ZmHOX2a(1) --------->AHL20(2)              --------->TOE2(3)   ----- -->YAB1 <---------AHL20(2)    <------------MYB.PH3(2)                   ----------->RAV1(1)    -----   catcagcctaattaactgcctaagtgtcctctaacaaacttaaaaaaaaaatcagtaatctacttgctactaaaacaacattaagacaaattaggtaata  9963400            <----------DOF2      <---------ICU4    <---------AHL20(1)    <---------AHL20(2)    --------->AHL20(2)   --------->YAB1  <---------YAB1 --------->AHL20(1) --------->AHL20(2) --------AHL20(2) ------->AHL20(1)                                            --------->LBD16 --------AHL20(1)                                           --------->ANAC46                     ---- ------->AHL20(2)             --------->WOX13(1)         --------->ARR14(2)                 --------- -----AHL20(1)              <---------ATHB12            <---------CCA1(2)              --------->DAG2 >GT1<---------YAB1     <---------AHL20(2)      <---------AHL20(2)                    ---------->DOF2 -----AHL20(2)          --------->AHL20(2)      --------->AHL20(2)     --------->YAB1<---------MYB52(1) ---->AHL20(1)       --------->TOE2(3)   --------->ANAC46<---------ARR14(2)         <---------RAP2.6(3) ---->AHL20(2)   ---------->ID1          --------->ZAT6 <---------GLK1(1)          --------->RAP2.6(2)   aaatattataattccttttgtcacattaaaatcattcacattcacactatataattccatatccgaaattcaaacataattttagccgtaaagtcaaagt  9963500                 <---------TOE2(3)       --------->WRKY38(1)                                                       <---------WRKY18(1)     --------->REM1(2)                                                          --------->WRKY38(1)    --------->ALFIN1                                                            --------->WRKY45  <---------bZIP60(2)                 --------->HSFB2a(2)                       --------->WRKY12  <---------ANAC58                    <---------HSFB2a(2)                       ----------->HVH21  <---------ANAC58             <-----------GT1                                 <---------MYB52(1)  <---------ANAC46       <---------TOE2(3)                                     *TSS <---------ALFIN1  <---------ANAC55(1)    <---------TOE1(3)      --------->TOE2(3)              --------->DOF5.7(2) ----->MYB52(1)<---------AHL20(2) <----------DOF2  ---------->DOF2      <---------ALFIN1 ->DOF2--------->WRKY45 <-----------GT1       <---------YAB1   <----------DOF2<-------GAMYB  <-------   aatggcgtgttgactaaataatgttttaacgattttctttccaaaactattcttaaagtatttcactttgagccatacaccgttgaccacttcaatacct  9963600                                --------->RAP2.6(2)                                ----------->RAV1(1)                          <---------ALFIN1                        <---------ALFIN1                                                            -                       --------->ZAT14                                                             --                      --------->AtMYB61                    <---------ICU4                          --                      <---------ALFIN1                    <---------YAB1               <-----------GT1                     --------->ANAC46                  ------>ZmHOX2a(1)            <----------DOF2<-                   --------->AtMYB61                ------>ZmHOX2a(1)      <------ZmHOX2a(2)       --                   --------->ANAC46                 ==============================HOX2a_HOX2a      --                   <---------ALFIN1              <-----------GT1          <---------ARR14(2)      <--   <----------DOF2--------->MYB46(3)--------->GLK1(2)  ===========================HOX2a_HOX2a     --- --ARR11(3) <<<<<<<<<TBF1 --------->ANAC46      <-----------GT1           --------->ARR14(2)   <-----   tcgcgcttctcttcttcttcaccaccacacacagccacaatcttttgaattttcctcctcatcatcgtctctctccgatccatggcctttaacaatttca  9963700                          ---------->DOF2                       ------>NtERF2                       --------->LBD16                      --------->DEAR3(1)                     <------NtERF2                    --------->ABI4(1)                    ------>NtERF2                    <---------ATERF1(1)                   --------->RRTF1(3)                   --------->RAP2.3(3)                   --------->RRTF1(2)                   --------->RAP2.3(2)                   --------->ATERF1(2)                   <---------DEAR3(1)                   --------->DEAR3(1)                   <---------ATERF1(2)                   --------->RAP2.6(2)                  --------->RRTF1(1)                  --------->ATERF1(1)                  --------->ERF1                  --------->RAP2.6(1)                  --------->DEAR4(2)                           --------->At4g35610                  -                  --------->RAP2.3(1)                          <---------At4g35610                  -                  --------->ORA47(2)                           <---------ZAT2                       - ----->NtERF2    --------->LBD16                           ------>ZmHOX2a(2)                       -- ------->ANAC58  <---------ATERF1(1)                      <---------GLK1(1)                        <- ----->GAMYB     <---------At4g35610                      <------ZmHOX2a(2)                       --- --------ALFIN1  ------>NtERF2                           --------->ARR11(3)                       --- ------->ANAC58  --------->At4g35610              <------MYB46(1)                          <--------- ------->ANAC46  --------->ABI4(1)               <---------TOE2(3)        --------->MYB52(2)      --- -------MYB55(2)--------->DEAR3(1)               --------->MYB59         <-------TEIL ----------->GT1 ------>MYB46(3)--------->ANAC46<---------RAP2.6(3)      <---------ARR11(3)      <---------LBD16<---- ------GT1   --------->ANAC46  --------->RAP2.6(2)<------MYB83 --------->ZAT2  <-----------GT1-------   cccgcctcgatgctcactccgccgccgagaaagccgtctctgtaatcggattaggttacgatctctgctccgatgttcgtttctccgcttgtaaaaccac  9963800          --------->LBD16         <-----------RAV1(2)      <---------ARR14(2)    <---------MYB46(3)    --------->HSFC1(2)    --------->HSFB2a(1)    <---------HSFC1(2)    <---------DEAR3(2)    <---------HSFB2a(1)   <---------DEAR3(1) --------->MYB52(1) ------------>AtMYB77 ---------->HVH21                         <---------MYB52(1) ------>GAMYB                            --------->At5g28300 -------->ANAC46                        ----------->GT1 ------->MYB46(3)                      <------------AtMYB77 <---------AtMYB61 --------MYB55(2)                    <---------ARR14(2)    <---------MYB52(1) ------>ANAC58                       --------->ARR14(2)   --------->LBD16 ------>ANAC58                    --------->ANAC58       <---------DEAR3(1)           <---------ZAT2 --GT1--------->ARR14(2)     ----------->HVH21           --------->LBD16              --------->ZAT2 ------>ANAC46              --------->DEAR3(2)          <---------LBD16  <---------DOF5.7(2) -----ALFIN1   --------->MYB52(2) --------->ANAC58      --------->LBD16--------->DOF5.7(2)        --- -->AtMYB61  <--------P    <-----------------AGL1      --------------------->WRI1 --------->HSFB2a(2)   acccgacggttccaggttagtcgaaatcgacccgactcggaaccgtgacttaatcttccccggtggtatcgtcgttaacaacgtctcgagctcgattaag  9963900                                                                                               ------                                                                                       <---------ANAC58                                                                                       <---------ANAC46                                                                                       <---------ANAC58            --------->HSFB2a(1)                                         <---------AHL20(2)    <------           --------------->AtSPL3                                  --------->TOE2(3)  <-------TEIL           ------->TEIL                  <----------DOF2         --------->ARR11(3)  --------->GLK1(2)   ---------->DOF2                <-----------GT1                <---------ARR11(3) <---------GLK1(2) ------>ZAT18                    --------->ARR14(2)       ----------->GT1         ----------->ARR10   tgcgataaaggcgaacgtactcgattacgctccgatatactctcttttaatcaggttttttagttaaaatctaaataatccactgagattcgtgtttttc  9964000                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                         --------->GLK1(2)                                                                                        <---------GLK1(2)                                                                                        --------->ARR14(2)                                                                                        <---------ARR14(2)                                                                                       <---------HSFC1(2)                                                                                  --------->LBD16                                                                                  <---------HSFB2a(2)                                                                     --------->CCA1(2) --------->HSFB2a(1)                    <---------ANAC58                            --------->YAB1    --------->HSFB2a(2)                    <---------ANAC46                <------NtERF2   <---------ARR11(3) --------->HSFC1(2)                    <---------ANAC58              --------->ETT(1)  --------->ARR11(3) <---------HSFB2a(1)  <---------HSFB2a(2)                             <---------ANAC46  <---------ARR14(2)----------->ARR10  --------->HSFB2a(2)                           <-----------HVH21   --------->ARR14(2)<---------KAN4(2) ---->ID1--------->TOE2(3)               <---------ANAC46      <---------ATHB12  <---------LBD16 -----GT1--------->TOE1(3)             <---------ANAC46 ----------->GT1         <---------LBD16   gtttttagaaaccctaatttttgagtgtgttttttttgtttttgtgtagatgtcggagaagtttaatcaagatatgtgtctctccgggaagattccgtca  9964100  Previous    Next  AGI:  At1g28380.1    Description:  NSL1 (NECROTIC SPOTTED LESIONS 1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24290.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN74094.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66408.1); contains InterPro domain Membrane attack complex component/perforin/complement C9 (InterPro:IPR001862) Range:  from: 9963579    to: 9966306    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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