Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------ANAC58              <---------HSFB2a(2)                          <---------ANAC46              --------->HSFB2a(2)                          --------->ANAC55(2)     --------------->AGL15                   --------->MYB46(3)             <---------------AGL15                             -                 <-----------GT1                 ----------------->AGL2                 <----------DOF2      --------->TOE2(3)   <---------ANAC58     <-----------GT1         <---------ARR11(3)   <--------     --------->REM1(1) <----------DOF2      <---------AHL20(2)   <-----------GT1      <---------At4g35610   ttgttctacatcaaatttgtaaccactttcgtgactagaagtttattttatacccttactagaagtttaacgagacctctctcatttgagctttcttatt  9939800                                                             <---------MYB46(3)    --------->ANAC46               ---------->DOF2           ----------->GT1    --------->ANAC58      <---------DDF1                    <---------ATHB12    --------->ANAC58     <---------ETT(2)            --------->WOX13(1) --------->ARR14(2)      --------->ETT(2)       <------ZmHOX2a(2)                            -------- <---------ARR14(2)     <---------------------WRI1 <---------YAB1             <------------CBF -------->CCA1(2)  <-----------RAV1(1)         --------->ARR11(3) <---------TOE2(3)         <-------- -YAB1   <-------TEIL<---------AtMYB61         <---------ARR11(3)---------->DOF2       <---------WRKY18(1)   cgatatacgcatacatggattttgtggtcgacatttccaaagcctataagatcatcaatccaatggttaaagataaatgacattgagcttgactacgata  9939900                                                                                                -----                                                                                                -----                                                                                                =====                                                                                          <---------ALFIN1                                                                                         <---------ZAT14                                                                                    <-----------GT1                                                                            <---------CCA1(1)   -----                                                                            <---------RVE1(1)   -----                                                                    --------->AHL20(2)   --------->ZAT14                                                                    <---------AHL20(2)   <---------ZAT18                                                             <---------PCF2<---------AHL20(1)   -----                              ------>ZmHOX2a(1)            --------->MYB55(2)   <---------AHL20(2)     <---------ZAT18     --------->KAN4(2)           --------->MYB52(1)    <---------ARR11(3)   <----     --------->ZAT18    <---------ICU4  --------->AHL20(2) <---------MYB46(3)   --------->AHL20(2) ->YAB1                 <---------KAN4(1)        ---------->DOF2   --------->AHL20(2) ----------->RAV1(2) -YAB1                 <---------YAB1   <---------AHL20(2)--------->ALFIN1 --------->ARR11(3)   =====   acttaagtgcgcatcaaaacatttgattattcctcatccaaattaaaaaaaaaaagaacggtgggagcatttaataagatatttatttacctgcactcac  9940000                                                                       --------->ZAT14                                                           ----------->GT1                                                          --------->DAG2                                                         ---------->DOF2 ------>ZmHOX2a(1)                                    ------>MYB46(1)  <---------ZAT18 ---->ANAC58                                          ------>MYB83     --------->ZAT18           <--- ---->O2                       ------------------------>ANAC81         <---------ZAT14           <--- =======================bZIP_DOF                    <---------------AGL15                        <--- ---->ANAC58              --------->ANAC58          --------------->AGL15                       <---- ---->ANAC46              --------->ANAC46         ----------------->AGL3                      ------ ---->TGA1a               --------->ANAC58         ----------------->AGL2                     <------ -----TGA1a  <----------DOF2---------->DOF2       ------->TEIL  <---------YAB1          <---------YAB1 =======================bZIP_DOF               <---------MYB52(2) <---------AHL20(2)  --------->CCA1(2)   gtcctctctcttcttctttcactcttacacgaaaggaaaacaaacaaaaacgaaccaaataaagttattttagtgctctctaatggcgatatgagagatt  9940100          <-------TEIL         --------->CCA1(2)        <---------ARR14(2)                                  --------->YAB1        --------->ARR14(2)                                 <---------ATHB12      ----------->ARR10                            ------------>CBF    XXXXXXXXXXXXXXXXXXXX>MIR835-3P         --------->HSFC1(1) ------ANAC58                              <---------HSFB2a(2) ------ANAC58           --------->YAB1 <----------DOF2 ------------>CBF                            <- ------ANAC46          <-------TEIL --------->GLK1(2)  <---------ATHB12         <---------GLK1(2)---- ---TEIL--------->ARR11(3) --------->ATHB51--------->HSFB2a(2)                <---------TOE1(2) ----- --->GLK1(2)     ---------->DOF2   <---------GLK1(2) --------->WOX13(1)   <---------YAB1    <-------- ---GLK1(2) ----------->GT1<---------ICU4  <---------HSFC1(1) <---------YAB1 ------>ZmHOX2a(1)  =====   cgtgagagaagatacagaaaaaagcttcataatttgagattctttctagaaaaatcaatcaatgatgcttcgatttatcctagcttctcttctcctttcc  9940200                                         --------------->AGL15                                         <---------------AGL15                                         --------->HSFB2a(2)                                         <---------HSFB2a(2) ---------DOF2                    --------->MYB52(2) -->ZmHOX2a(1)                   <-------TEIL                     --------->ARR11(3)     <---------YAB1 ---------->AGL15              <---------GLK1(2)         <---------YAB1    <---------ANAC58        -- --DOF2                     <-----------RAV1(2)        <---------At4g35610 <---------ANAC58      <--- ========================================================MADS_MADS<---------ARR11(3)   <----------DOF2   tcttttagtctctactcttctctagctcgaccaggttcgttttctagatttagtttcttctgattcgaaatcttttgacttgcatttgactttgattcgc  9940300                                                                  ------>MYB83                                                                --------->AtMYB61                                                                <---------ALFIN1                                                  <---------HSFC1(2)        <----------DOF2                                                  --------->HSFB2a(1)     ------->TEIL                                                  --------->HSFC1(2)   --------->ANAC55(2)                    <---------ANAC58              <---------HSFB2a(1)  --------->ANAC58                    <---------ANAC58              <---------KAN4(1)    --------->ANAC58         <---------At4g35610           <---------ZAT2           --------->MYB46(3)         --------->At4g35610           --------->ZAT2           <---------MYB111(2)              ----     <---------ANAC58     <------ZmHOX2a(1)       --------->KAN4(1)<---------MYB52(2)    --------->CCA1(2)     <---------ANAC58   <---------TOE2(3)   <------ZmHOX2a(1)   <---------MYB111(1)     --------->ARR11(3) ------->ATHB12 ------->MYC3       --------->ALFIN1          --------->AtMYB61 <---------MYB46(3)<--- -------DOF2    <-------MYC3  --------->MYB52(2) <---------KAN4(2)------>MYB46(1)    <---------TOE2(3)   ttgatttgcttagctccatatgccttgaggattagttgtggagctaggaagaatgttcgaacaccaccaacttacgcactttggttcaaggatatagcat  9940400              ------>MYB83              ------>MYB46(1)            <---------MYB111(1)          ------->TEIL          <---------ARR14(2)          --------->ARR14(2)                                                                        -        <---------SPL7                                                                      <--------       <---------ANAC58                                                                  ------>MYB83       <---------ANAC58                                                                  ------>MYB46(1)      --------------->AtSPL3                     <----------DOF2     <-----------GT1     --------->MYB52(1)      <------NtERF2                   <---------MYB59            <---------CCA1(1)     <---------MYB59   <------ZmHOX2a(1)                 <---------ANAC55(2)         <---------RVE1(1)     <---------MYB46(2) ----->ARR14(2)                      --------->ANAC55(2)        --------->ARR11(3)     <---------MYB111(1) ------ARR14(2)         --------->MYB46(3)    ------>ZmHOX2a(1) <---------ARR11(3)  <------ZmHOX2a(1)   atacaggaggcgtacctgccaatgcaacaacgcctacttacataactcctcctttgaagactcttagatatttcccaatctctgaaggacctaacaattg  9940500                                              --------------------->WRI1                                          ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)                                        <-----------ARR10                                        --------->ARR14(3)                                        <---------ARR11(3)                                        --------->ARR14(2)                   --------->MYB52(1)   --------->ARR11(3)                  ===============================HOX2a_HOX2a                  ==============================HOX2a_HOX2a                               -----------             --------->GLK1(1)          <---------ARR14(2)                       ------->TEIL             <---------GLK1(1)          <---------ARR14(3)                      <---------GLK1(2) ----------->RAV1(1)                   <------ZmHOX2a(1)                        --------->ARR14(2) <- -------->REM1(1) ------>ZmHOX2a(1)  >>>>>>>GRF7                        <---------YAB1  <----------DOF2 -ICU4 <-----------HVH21          <-----------HVH21            ------->TEIL ---------->DOF2       <--   ctacaacattgtcagagttcctaagggtcattactctgtcaggatcttctttggacttgttgatcaacctagttttgataaagaacctctctttgacatt  9940600                                                                                                <----                                                                                            <--------                                                                                       <---------ANAC58                --------->GLK1(1)                                                      <---------ANAC46       <---------ZAT18                                                                 <---------ANAC58 >HVH21--------->ZAT18               <------MYB83                    <---------At4g35610 --------->ALFIN1 --------------AGL15                 <------MYB46(1)           --------->At4g35610    <---------MYB46(3) -------YAB1    <---------GLK1(1)  <--------P  --------->ICU4  <---------At4g35610<----------DOF2   tctattgaaggcactcagatttcttctcttaaatctggttggagtagtcaagatgatcaagttttcgctgaagctctcatttttcttttgggtgggactg  9940700  Previous    Next  AGI:  At1g28340.1    Description:  leucine-rich repeat family protein. similar to leucine-rich repeat protein-related [Arabidopsis thaliana] (TAIR:AT1G25570.1); similar to hypothetical protein OsI_025213 [Oryza sativa (indica cultivar-group)] (GB:EAZ03981.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66411.1); similar to leucine-rich repeat family protein [Lycopersicon esculentum] (GB:ABH07898.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 9940162    to: 9943536    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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