Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------ARR14(2)           --------->ARR14(2)           <---------ARR11(3)        <---------HSFB2a(2)                                                                        --  <---------AtLEC2                                                                     --------->DAG2 ----->ALFIN1                                    --------->ATHB12                     ---------->DOF2 --------RAV1(1)    --------->YAB1----------->RAV1(1)                  --------->AHL20(2)          <- -->DOF2--------->HSFB2a(2)  <---------At5g28300<---------YAB1  ---------->DOF2----------->GT1     <-   tgttgcattgccagaacttcaataacaaaattacagccacattaagttccatgatagaaacaaaactaaagcatataatacatgtaaaaaaagtcatctt  9924100                                                     ------>ZmHOX2a(1)                                                    <-----------------AGL3                                                    --------->TOE2(3)                                                   ----------------->AGL3                                                   ------>ZmHOX2a(2)              --------------->AtSPL8                                                  <------ZmHOX2a(2)           --------->ZAT6           --------->ICU4                        --------->ARR14(2)         <-----------GT1 --------->ZAT18              ------>ZmHOX2a(1)  <---------ARR14(2)       <---------WOX13(1) ------->At4g35610            ============================HOX2a_HOX2a   --------->ATHB12 --------At4g35610            ===========================HOX2a_HOX2a   <---------YAB1               - --------ZAT18   ---------->DOF2            <----------DOF2          --------->YAB1         <------ZmHOX2a(2)   gtgctcactggtattgatgaaaagcatgcttcctcatcttcaatccctttggatcctaaaattgaaaccaagtatgattaacactttgtactcgatcatg  9924200                                                                                                    -                                                                                                    <                                                                                          <------NtERF2                                                                                        <---------DEAR3(1)                                                                                       --------->RAP2.6(3)                                                                                <---------WRKY18(1) -                                                      <------ZmHOX2a(2)         >>>>>>>>>>WRKY62   <-                                                     --------->ARR11(3)         >>>>>>>>>>WRKY18   <-             <---------AHL20(2)                     <---------GLK1(1)           >>>>>>>>>>WRKY40   --         --------->AHL20(2)                  ---------->DOF2 <----------DOF2   --------->WRKY38(1) <-     ----------->GT1    --------->GLK1(2) <---------ANAC46   ----------->HVH21 --------->WRKY45   <-- --------->DAG2        <---------GLK1(2)  ----------->GT1   <---------ANAC58   --------->WRKY12 <---- --------->DOF2 <---------TOE2(3)        --------->MYB59    <---------ANAC58 <----------DOF2    -----   tgtaaagtagataaatttatggatagaatctcaaaacaagaattgggtaaagagagatcagggcttacagggccttcgactttgaccaagacggcgaaat  9924300         ----------->HVH21       --------->At4g35610       <---------At4g35610     --------->DAG2    ---------->DOF2 --------->LBD16 -------->HSFB2a(2) ---------HSFB2a(2) -------->LBD16                                                                     <---------At4g35610 --------ANAC46                                                                  ---------->DOF2 --------LBD16                                                             --------->GLK1(2) ------->HSFB2a(2)                                                        <---------GLK1(2) --------HSFB2a(2)                                                  --------->ARR14(2) -------LBD16              <-------TEIL                             <---------ARR14(2) -----ARR14(2)  <----------DOF2     ---------->DOF2           --------->DAG2  <---------ANAC46 ---->GLK1(2)   --------->TOE2(3) ------>ZmHOX2a(2) <---------AHL20(2)    <---------ARR14(2)   tccgggaaaagctgacaactttagacacatccatgatcgaaagagaagggatttttaatcggagaaggtggatttggattctgtatagcagacaccaaaa  9924400                                                                             --------->ARR14(2)                                                                             <---------ARR14(2)                                                                            <------NtERF2                                                                            --------->ATERF1(1)                                                                            --------->At4g35610                                                                            <---------At4g35610                                                                           *TSS                                                                           <---------MYB46(3)                                                                           <<<<<<<<<AtERF-5                                                                           <<<<<<<<<AtERF-2                                                                           <<<<<<<<<AtERF-3                                                                           <<<<<<<<<AtERF-4                                                                           <<<<<<<<<AtERF-1                                                                           ------>NtERF2                                                                           <---------RAP2.3(1)                                                                           <---------ERF1                                                                           <---------ATERF1(1)                                                                          <---------ANAC46                                                                          <---------RAP2.3(3)                                                                          <---------RAP2.6(2)                                                                          <---------DEAR3(1)                                                                          <---------RAP2.3(2)                    <---------TOE2(3)      --------->YAB1           --------->ARR14(2)               <----------DOF2             <---------ICU4         --------->LBD16              ------>ZmHOX2a(2)           <---------YAB1         --------->ANAC58            --------->ARR11(3)            --------->ICU4         --------->ANAC46            --------->ARR14(2)          --------->YAB1           --------->ANAC58                 ---            <---------ARR14(2)        --------->ARR11(3)         --------->ANAC55(1)         <-------            <---------ARR11(3)        <---------ARR11(3)        <---------LBD16    <---------MYB52(1)            <---------AGP1           --------->YAB1   --------->YAB1<---------ARR14(2)       <-------           <---------CCA1(2)  <---------WRKY38(1)     <-----------GT1    --------->RAP2.6(3)<------ZmHOX2a(1)   ttgttcgaagtttggatcttttaagtttttgggcaacgaagataataataagctaatcacaacattcacggaaatggcggctacggtttggctaggattg  9924500                              --------->ARR14(2)                            <------MYB46(1)          ----------->GT1                         <---------MYB52(1)          <---------ANAC55(2)                       <------MYB46(1)               --------->ANAC55(2)                       <---------DEAR3(2)            <------MYB46(1)                       <------MYB83                  <------MYB83                      --------->MYB59               --------->MYB46(2)                     <-------TEIL                   --------->MYB59                   <---------PCF2                 --------->ICU4                  <------MYB46(1)             --------->At5g28300                  <------MYB83<---------ARR14(2)>>>>>>>>>GT-2                  <---------DEAR3(2)         ----------->GT1                                       <-                --------->ALFIN1          ------>MYB83                    <------MYB46(1) <---------HSFB2a(2) <------------CBF<---------MYB46(3)       --------->MYB52(1)              <------MYB83    --------->YAB1 --------->CBF  <--------P  <------MYB83 --------->MYB55(1)       --------->CCA1(2)    <----------DOF2 -----CBF      <---------MYB52(1)      --------->MYB46(3)    ----------->GT1        <---------ARR11(3) --ARR14(2)<---------LBD16 --------->MYB59------>MYB46(1) --------->ICU4 --------->MYB59  --------->HSFB2a(2)   ggcaattgaagtcttcgggtgggttcggttcggttctccgaaccaaacggtaattaggtgataatgtgatatggttcggtcttcaatttctttcagaact  9924600                                                 <----------DOF2                                                <---------DAG2                                             <-----------GT1                                           --------->YAB1                                          <---------YAB1                   --------->AHL20(1)   --------->ATHB51                   --------->ARR11(3)   -------->ATHB1               <---------AHL20(2)       <--------HAHB4        --------->ZAT6                  <---------ICU4                                      <--------  <------MYB83--------->AHL20(2)        --------->YAB1                                  <---------AHL20(2)  <------MYB46(1)  <---------ARR11(3)  --------->ICU4           <---------ZAT6        <---------AHL20(2)  <---------MYB46(3)   <-----------GT1 <---------ATHB51   --------->ATHB12         <---------ARR11(3) --------MYB52(1)  <---------AHL20(1)  <---------YAB1    <---------YAB1            <---------AHL20(1)   cgtttggttaccactattaaaaatatttcagttcaactacaattattataccttttgttttgattagtgtttcatatttttgcagtatattttttttctc  9924700              --------->AHL20(1)              --------->AHL20(2)              <---------AHL20(1)              <---------AHL20(2)             --------->AHL20(2)      <-------TEIL   <---------At4g35610   --------->At4g35610                                  --------->ZAT6  --------->ANAC58                                      --------------->AtSPL3  --------->ANAC58   --------->TOE2(3)                  --------------->AtSPL8                      - ---GT1--------->REM1(1)                         <----------DOF2                                  <--   ttgtaagctacatgaataaattttcttaatctaatattggtttttgagaaactttatatcagtacatgtttgaaaaaaaaaaaaactctttgaaaccaag  9924800                                      <---------HSFB2a(2)                                  --------->ARR14(2)                             --------->ZAT2                             ----------->RAV1(2)                           --------->DEAR3(1)                           --------->AtMYB61          --------->DEAR3(1)                           <---------ALFIN1          <------NtERF2                                  <                          --------->MYB46(3)       --------->DEAR3(1)                            ---- <---------MYB52(1)     --------->ANAC46          --------->MYB46(3) <---------ALFIN1          <----- -------->LBD16         <---------ALFIN1    <---------ZAT6  <-------TEIL     ---------->DOF2   ------ -------LBD16   ---------->DOF2   <---------ARR14(2)------>NtERF2------>ZmHOX2a(2)           --------   tccggtagtacaagagagaaaagtctccaccacctggattcgagtagtattagccaccgaggttcgatcgcccatcccaaaaagaagatagagcttagat  9924900          --------->ICU4                                     <---------MYB59  <------NtERF2                                             --------->At4g35610                 <---- ---------DEAR3(1)       --------->YAB1                     <---------At4g35610          <---------ANAC55(2) -->ZmHOX2a(2)          <---------YAB1             <-------GAMYB                         <---------YAB1 ----ARR11(3)<---------YAB1                       --------->MYB52(2)          --------->ZAT14   <---- --->ARR11(3)<---------TOE2(3)                    <---------MYB46(3)          <---------ZAT18   <---- --->ARR10<---------ATHB51       <---------ICU4 <---------MYB52(1)            <---------ZAT14   <----   cgtcggagaaaaattatggtaaacttatcatgaaatacttacaaacttcggtttgttgtatgagctaacttgttttccagtgttctctattatgtatgac  9925000  Previous    Next  AGI:  At1g28320.1    Description:  DEG15; endopeptidase. similar to DEGP1 (DEGP PROTEASE 1), serine-type peptidase [Arabidopsis thaliana] (TAIR:AT3G27925.1); similar to putative protease/hydrolase [Lycopersicon esculentum] (GB:ABH07902.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66416.1); contains InterPro domain Peptidase, trypsin-like serine and cysteine; (InterPro:IPR009003) Range:  from: 9920494    to: 9924475    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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