Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <-----------GT1                                                                       <---------AHL20(1)                                       <----------DOF2                 --------->AHL20(2)                                       <---------DAG2           <---------MYB59                                     ------->TEIL            <-----------GT1                                <---------ICU4       --------->TOE2(3) --------->AHL20(1)                                --------->YAB1     ------->TEIL --------->TOE2(3)       --------->ZAT2                        <---------ANAC58           --------->SPL7      <---------ARR11(3)                ------>NtERF2  <---------ATHB51  <---------SPL7 --------->TOE1(3)       --------->At4g35610           <---------At5g28300 --------->ICU4   ------>ZmHOX2a(2)      --------->ARR11(3)       <---------ICU4   <---------ANAC58       --------------->AtSPL8  <---------AHL20(2)         --- --------ARR11(3)<------NtERF2 <---------ATHB12--------------->AtSPL3 --------->AHL20(2)<---------At4g35610   agataacaattcttacggtggcattggcttccaattatgaactttatggatcgtaccttgatttaacctaaaatatattccatcttctctagctgtccat  9905100                                                                                              -------                                                                                         --------->ANAC46                        --------->LBD16                                                --------->REM1(1)        ------>NtERF2 <---------LBD16                           --------->YAB1        <-------TEIL     ------->TEIL  <---------ALFIN1     --------->ANAC46     ------>ZmHOX2a(1)  ---------->DOF2------ ------>YAB1     <---------ALFIN1<-------TEIL   <-----------RAV1(1)<---------ICU4 <---------------AtSPL8   tcatatgtgcctccttgagccacacccggtttatattcatacacatcaaattgttggccagtcctataatcaggcccatgtctaaaggtacaccaaaaaa  9905200                                                                                    <---------ARR14(2)                                                                                  --------->LBD16                                                                                 <---------HSFB2a(2)                                                                             <----------DOF2                                                                            <---------DAG2                                                                          <------NtERF2                                                                        <---------DREB2C(2)  <-------                                                                        <---------RAP2.6(2)  --------        <---------HSFB2a(2)                                            --------->DDF1        <-------        --------->HSFB2a(2)                                            --------->RAP2.6(3) --------->ANAC46 <---------ANAC58                         <-----------GT1             <-----------HVH21  --------->ZAT6 <---------ANAC58                   <---------AHL20(1)               ===================bZIP_DOF ---- <---------ANAC46                   <---------ARR11(3)               --------->TGA1a--------->ARR14(2) --->DOF2          --------->TOE2(3)--------->ARR11(3)               --------->O2--------->HSFB2a(2) --->DAG2   --------->YAB1          --------->AHL20(1)           <-----------------AGL1<-----------GT1   gtgtcgtcttccaaaaattatccctaatatcaaattgatatatttttccatacttgacataatgttttcccatgtcggcctttccagatttacactgcac  9905300                                         --------->CCA1(2)                                        --------->ARR14(2)                                        <---------ARR14(2)                                        --------->ARR11(3)                                        <---------ARR11(3)                                        --------->ARR11(1)                                      --------->LBD16                                     --------->HSFB2a(2)                                     <---------HSFB2a(2)                                     <---------------AGL15                                    <-----------------AGL2                                    <-----------------AGL1                                    ----------------->AGL3                                <---------HSFB2a(1)                                ------>ZmHOX2a(2)                                --------->HSFB2a(1)                         <------ZmHOX2a(2)              <---------ANAC58              --------->ANAC58                   <---------WOX13(1)--------------->AGL15                            --------->ANAC58                 --------->ATHB12   <-----------------AGL3                            --------->ANAC46 --ZAT14        <---------YAB1 <------ZmHOX2a(2)        <---------ANAC58     <---------ATHB12 ->ZAT14      <---------At4g35610   ----------------->AGL1                   <---------ATHB51 --ZAT18    <---------ANAC58  <---------ARR11(3)<---------ANAC58           --------->WOX13(1)  ------ ------>DOF2<---------ANAC58  --------->ARR11(3)<---------ANAC58   <-------TEIL <---------YAB1 <-----   aaagaggtctgagtgcttctgattgggatcaagatcgttccagatatggagcttgtttgctcgtccatatacattaccaattatgcataggccataaaaa  9905400                                                                                          <---------At4g35610                                                                                  <--------ATHB1                                                                                  <---------ICU4                                                                                  --------->AHL20(2)                        <---------AHL20(2)      <---------AHL20(2)                --------->YAB1                   <---------AHL20(2)          <---------AHL20(2)                 <---------AHL20(1)-               <---------RVE1(1)               --------->AHL20(2)                 <---------AHL20(2)-               <---------CCA1(1)            <---------ARR11(3)                   --------->ICU4     <        ----------->HVH21                   --------->ARR11(3)                   <---------ATHB51  -- --->AHL20(2) <---------ARR11(3)   <---------At4g35610                           <---------ATHB12  <- ----AHL20(2) --------->ARR11(3) <-----------RAV1(2)                           --------->YAB1<-------   aatagaaacactgacagatatttcatttttttttttcaggtgtttagattttaattttcttctgtttttgttattttgaactaataattttcttctgcta  9905500              <---------ANAC58          ----------->TBP      <---------ANAC58          --------->AHL20(2)      <---------ANAC58          <---------AHL20(2)   *TSS<----------DOF2      <---------AHL20(2)                      <---------ANAC58 -------->AHL20(1)          --------->AHL20(2)  --------------->AGL15                              -- -------->AHL20(2)          <-----------TBP     <---------------AGL15                     <---------HSFC1(2) ---------AHL20(2)        ----------->TBP--------->AHL20(2)         <---------ANAC58      --------->HSFC1(2) ------->AHL20(2)        <---------AHL20(2)    <-----------------AGL3                     --------->HSFB2a(1) --------AHL20(2)       --------->AHL20(2) <------------CBF <-----------GT1               <---------HSFB2a(1) --At4g35610  <---------ANAC58----------->TBP  <-----------------AGL2   ---------->ARF1<------ZmHOX2a(1)   attaaattgcttttgtgcttgttatattatatatataaatctataaattgctatttttagatttacattttcttgtctccagacttataggaaatttcta  9905600                                                                                                    -                                                                                <---------ZAT14     <                                                                     <-----------GT1                <       <---------TOE2(3)                                        <---------AHL20(2)          =========  <---------ICU4                                               <---------AHL20(1)       <-----------GT1  -------->HAHB4                                               <---------ARR11(3)    --------->ARR14(2)  --------->YAB1                                              <---------CCA1(2) --------->ZAT18     - <---------ATHB51     <---------ZAT14                 --------->ARR14(2)        --------->ZAT14     = --------->ICU4       --------->ZAT14                 <---------ARR14(2)--------------->AGL15  ------ ------->YAB1    <---------ATHB12                    <---------CCA1(2) ----------------->AG <--------   ttaataatgaaggtagcaaatcagtgtattggaattttggctaatccaaaactgtgtatcgtccatatattttaccaaaaactgcagtattttccttttg  9905700 ------->MYC3 <-------MYC3 -------->ALFIN1 ---------O2 ---------TGA1a =========bZIP_DOF                        <-----------GT1 -------->O2                         <---------AHL20(2) =========================================bZIP_DOF ----->HVH21                   <---------DAG2      --------->ANAC58              <---------ARR14(2) --DOF2                        <----------DOF2     --------->ANAC58     <---------YAB1          -----   acatgtggcataagttttattttttatgttttgctttatttttttttctactcacgataaaaactattgccaatactattgcaaatttgagaattcaaaa  9905800                    <-----------GT1                 <---------ICU4                 --------->ATHB51                 <--------HAHB4                   ------->TEIL                <---------YAB1          --------->AHL20(1)                --------->ICU4          <---------ARR11(3)                    --------->TOE2(3)          --------->ARR11(3)            --------->ARR11(3)       --------->HSFB2a(2)               <-          <---------ARR11(3)           --------->CCA1(1)         <---------HSFB2a(2)         <-------         <---------CCA1(2) <---------YAB1        <---------CCA1(2)   ----------->GT1         -------- ---->GLK1(2) --------->YAB1           --------->RVE1(1)        <---------ANAC46     <----------DOF2   tcgggttttttatatctcataattacattatgttatctaaaatatcttgttgtatctaaacacatttcgagtagtaaaaaacttaaactttatatttata  9905900         <---------RVE1(1)        <---------ARR14(2)        --------->ARR14(2)        <---------GLK1(2)      ----------->ARR10    <-------TEIL <---------ANAC58 <---------ANAC46          <---------ICU4 <---------ANAC58         --------->ICU4 <---------ANAC55(1)    --------->YAB1 <---------ANAC55(2)    <---------ICU4                                                       <------- --------->ANAC55(2)   --------->ICU4                                                       <-------- ----------GT1         <---------ATHB12                                                     --------- --AHL20(2) <---------DAG2<---------YAB1                                                    <-------- ->AHL20(2) <----------DOF2--------->ATHB51--------->HSFC1(2)    <---------TOE1(2)       --------->WOX13(1)   tttacgtgcagatactttttgaaaaatcattatttctactatcgaaacttcatgagcttcttcatcttaggtgttcatcgctatggagtttcaattaatt  9906000  Previous    Next  AGI:  At1g28305.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G28306.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264) Range:  from: 9904721    to: 9905503    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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