Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <------MYB83                      --------->ANAC58                      --------->ANAC58               --------->TOE2(3)               --------------->AGL15                                                     <---------ARR11(3)               <---------------AGL15                                                     --------->ARR11(3)               --------->TOE1(3)                          --------->At4g35610           <---------CCA1(2)       --------->ANAC58        <------MYB46(1)   <---------ZAT2    <---------ARR11(3)  <---------AHL20(1)       --------->ANAC58 ---------->DOF2          --------->ZAT2    --------->ARR11(3)  --------->AHL20(1) ------->DOF2 ----------------->AGL1             <---------At4g35610                   --------->ARR11(3) -->ANAC58    ----------------->AG               --------->At4g35610 ------>ZmHOX2a(2) <---------ARR11(3) -->ANAC58<----------DOF2     --------->MYB59    ----------->RAV1(2)<---------YAB1    --------->AHL20(2)   aaaagaaacaagctttacctcaacaagaaagttaggtttttgtttctgatcagctgaattagcttccatgatctttggaatcagacaaatatatctcaga  9878800                                                            --------->HSFB2a(1)                                                            <---------HSFB2a(1)                                                          <---------GLK1(2)                                                       --------->YAB1                           ---------->DOF2            <-------TEIL                      --------->ZAT14                --------->GLK1(2)                        <------                      <---------ZAT14        --------->MYB52(1)            <------ZmHOX2a(1)---------                      <---------ZAT18      <---------MYB52(2)     --------->YAB1           <---------AHL20(2)   caagtgttcgaaatttgaagacagagcacaaaagcagcctgagaaactaacagagattcagaattttctcataaacaggaagaagatgagcatttcattg  9878900                                                                  <---------GLK1(1)          <-------                  <------ZmHOX2a(1)   --------->AHL20(2)          --------->GLK1(1)       --------->ANAC58              <-------TEIL            --------->YAB1           --------->ANAC46           --------->ANAC58             --------->GLK1(2)       --------->ICU4 <---------ANAC58                 <----------ID1     --------->ANAC46                <---------ATHB51  <------MYB83                --------->ANAC46     --------->ANAC58        <-----------RAV1(1)    <---------ANAC58               --------->ANAC58     --------->ANAC58    <---------ZAT14  --------->DAG2       --------->ANAC58    --------->ANAC58 ---WOX13(1) --------->CCA1(2)     --------->WOX13(1)  <------MYB46(1)       --------->At4g35610 >ATHB12  --------->ICU4 --------->ZAT14 ---------->DOF2       --------->ANAC58  ---------->DOF2 <---   atggcataagcaaagattcaggaccagaacactgtggcaattataaagcagagtgcttggtctacaagaaatctgaataagctcaaagccacaagctttg  9879000                                                   ----------->RAV1(1)                          -----                                                --------->ANAC58                             --------                                                --------->ANAC46                             <-------                                                --------->ANAC58                            ---------                                              ---------->DOF2                       --------->ANAC58                                         <----------ID1                             --------->ANAC46                                     <-------TEIL  <<<<<<<<<<<<<<<<<LFY  ---------->DOF2    <-------- ---DOF2         <---------At4g35610 <---------ZAT14              --------->MYB52(1)--------->ANAC58 ------ANAC46  <-----------RAV1(2)   --------->ZAT14              ------------------------>ANAC81   agtgaaaaccatgaaacccagatgatgaaattcaagaagtacagagacaaaagcaacaatggaagaaaaaacagagaaagaagaacacacaagagatatc  9879100         --------->At4g35610      ---------->DOF2  --------->YAB1 ---->YAB1                  >>>>>>>>>TBF1 ->GLK1(1)          ------------------------>ANAC81                  ---------->DOF2            ----- --GLK1(1)          --------->ALFIN1                         *TSS <----------ID1                <---- >ARR11(3)    <---------ZAT14            <------ZmHOX2a(1) <---------TOE2(3)               <--------- -ARR11(3)    --------->ZAT14----------->GT1           <----------DOF2           <------ZmHOX2a(1)   acaatcagagaagcagagtagagaggggaagaagaaaatcgaaggagagagttgagtctttatggaaaacgaaaagacgaagaggaagagagactttacc  9879200              ------->TEIL              --------->SPL7              <-------TEIL             --------->SPL1(1)            <---------SPL7           <---------ANAC58           <---------ANAC58           <---------ANAC46          --------------->AtSPL3         <------------------SPL14                            <-----------HVH21      --------->TOE2(3)                                   --------->ALFIN1 ---->HSFB2a(2)                ---------->DOF2--------->ANAC58   <---------O2 -----HSFB2a(2)     <------------CBF          --------->ANAC58----------->HVH21 -DOF2--------->TOE1(3)     ----------->RAV1(1)   --------->MYB52(1)                             <---   agaagaaaccttgacgtacggagattggaacaacaaaggggaaggaagaagccaagggaagtgtgtcacatggaagagagagattgctcagttgtgaaac  9879300                                                     <---------ICU4                                                     --------->YAB1                                                    <---------YAB1                                                   --------->ARR11(3)                                                   <---------ARR11(3)                                                  --------->YAB1                                                 <---------YAB1                                                 --------->ICU4                                               --------->YAB1                                              <---------YAB1                                              --------->ICU4                                            --------->YAB1                                           <---------YAB1                                   <--------                                           --------->ICU4                                  <---------CCA1(2)                     --------->YAB1      --------->YAB1                                  <---------ANAC55(2)                    <---------YAB1       -------->HAHB4                                  --------->ANAC55(2)                    --------->ICU4       <---------ICU4   <---------YAB1              --------->ARR14(2)               --------->At4g35610      <---------ATHB12 <---------ARR11(3)           <---------ARR14(2)               <---------At4g35610      --------->ICU4   --------->ARR11(3)         ----------->GT1               <---------ZAT2          <---------TOE2(3)--------->YAB1              <---------MYB46(3)          --------->DAG2             <---------AHL20(2)<---------YAB1           <---------AtMYB61 -------ID1  <--------P<---------YAB1--------->AHL20(2)--------->ICU4       <-------TEIL<-------TEIL   ggacaaattagaaaggtagctgatgatgatgttgatgaattaatgatgatgatgatcatgatcatggagaaatggaggtgcataggtggatacatatcta  9879400                                          <---------ANAC58                                          <---------ANAC58                                 <---------ALFIN1                                              <-----                                --------->RAP2.3(3)                                          --------                                --------->DEAR3(1)                                           <-------                                --------->MYB46(3)                                ------>ZmHOX2a(1)                              <---------ATERF1(1)                                --------->TOE1(3)                              --------->ZAT18                         <-----------GT1    <---------AHL20(2)                              --------->PCF2                      --------->AHL20(2)     --------->AHL20(2)                              <---------ZAT18                     <---------AHL20(2)    <---------AHL20(2)                  <<<<<<<<<TBF1--------->ATERF1(1)               <---------AHL20(1)     --------->AHL20(1)    <---------ARR11(3)        <---------PCF2                     --------->AHL20(2)     <---------AHL20(1)  <---------MYB52(1)        <---------ZAT18           ------>ZmHOX2a(1)          --------->TOE2(3) ---ARR10      <<<<<<<<<TBF1--------->ZAT18<----------DOF2       <---------AHL20(2)     --------->AHL20(2)   atccattatctcacttcttcttcttctaagtgcgcccacctattgctttgtttctcctctaaactaatttttttacattttctccttaaatttaatttaa  9879500                                                                                             <-------                                                       ------>MYB83              <---------At4g35610                                                       ------>MYB46(1)           --------->At4g35610-                                                      --------->ANAC46          <---------TOE1(3)  --                         ---------->DOF2             --------->MYB46(3)   <---------ANAC46   <------- ------GT1         <---------TOE1(2)              <-----------GT1      ----------->HVH21    --------- ->AHL20(2)       ------>ZmHOX2a(1)          ---------->DOF2         <---------ANAC58     ------>MYB46(1) --AHL20(2)      --------->TOE2(2)     <------ZmHOX2a(1)             <---------ANAC58     ------>MYB83   caatgtaatgcatattaatcctatgtaaaaagaagtttagaggaaacaaaagttacccactacttaatattccttgacgtttaagctaaaccttccttta  9879600                                                                            --------->AHL20(2)                                                                            --------->YAB1                                                                --------->YAB1                                                                -------->HAHB4                                                               --------->ICU4                                                          --------->ANAC55(2)   ---------->DOF2                                                         <---------TOE2(3) --------->ICU4 ---------->DOF2                                       <---------AHL20(2)  <---------YAB1 --DAG2<---------MYB59                              <---------AHL20(2)   --------->YAB1 ----->ZmHOX2a(1)                                   --------->AHL20(2)   <--------HAHB4 ------->TOE2(3)       <----------DOF2             <---------AHL20(2)   <---------ATHB12 ---DOF2------>ZmHOX2a(1)      --------->CCA1(2)   --------->AHL20(2)   <---------YAB1 >TOE2(3)      <-----------HVH21          ------>ZmHOX2a(1)    <---------YAB1 <---------YAB1     <---   tcctaaagtcctaactatgtcatgactttagggatatagtaatcctatgcgaattaatttatgtaatgatacctataattataaaagcatcaatatgagc  9879700  Previous    Next  AGI:  At1g28260.1    Description:  binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19400.1); similar to cig3, related [Medicago truncatula] (GB:ABD32367.2); contains domain PTHR15696 (PTHR15696) Range:  from: 9875587    to: 9879161    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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