Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                               <-----                                                                                              <------                                                                               <---------bZIP60(1)<--   --------->AHL20(2)                                                          --------->bZIP60(1)<--   <---------AHL20(2) <-------GAMYB                                       <---------ICU4      <------ ----->ANAC58        <---------MYB46(3)                                 <---------TOE2(3)     <------ ----->ANAC58       <---------AtMYB61                                  ---------->DOF2       -------- ----ANAC58     <---------ANAC58                                  <---------ANAC58           <------- ----ANAC58     <---------ANAC46        <---------YAB1            <---------ANAC46           -------- -WOX13(1)      <---------ANAC58      --------->YAB1<---------YAB1<---------ANAC58          ---------   cgcatttatatggccattgcttgtggttgtagtctcatagtcataatacatactctcattgtccagtttcgtttaaagatgacttcatttataggtggtt  9873800   <------MYB46(1)   <------MYB83 <--------P --------->ALFIN1 <---------MYB52(1) -------GAMYB --------MYB46(3) -------RAP2.6(2) -------ANAC58 ---P ---ANAC58 -------ANAC46                                                                            <---------WOX13(1) -------ANAC58                                                             ----------->HVH21       -- ---ANAC58                                                               --------->ANAC55(2)     ---- -GAMYB                                                                  <---------ANAC55(2)   ------ ->MYB55(2)                                                        <---------MYB59<---------AHL20(1) --MYB46(3)                    <----------DOF2                     --------->TOE2(3)    --------->ATHB12 ->MYB111(2)          <---------ZAT6                               --------->TOE1(3)   <---------AHL20(2) >ALFIN1         <----------DOF2          <---------AHL20(2)     ------->TEIL     <---------ARR11(3)-   gcggttgggaaatgagagtctttagtgctaagcctttaagacatttttttgtttgtatttttagatgaacctaaaacgtgacagtatatttgattgatcc  9873900           <---------ARR11(3)           --------->ARR11(3)       =================================bZIP_DOF       ---------->DOF2          ----------->HVH21      --------->AHL20(2)      --------->O2      <---------AHL20(2)      <---------O2   --------->YAB1             --------->TGA1a                       <---------ANAC58 ------->ZAT6                 --------->ANAC55(2)                   <---------ANAC58 ------->RAV1(1)              <---------TGA1a                 <---------AHL20(2) >ZmHOX2a(2)         --------->LBD16 --------->ANAC58    <---------DEAR3(2)                    <----- ---------->GT1    <---------LBD16   --------->ANAC58  ---------->ID1                          <-----   aacagtaataaaagagcttaaaccggaatcaaacgtgacactctattacttctacttgtcggttttaatttcgtctcgtttcaaaatcgttctatgtagg  9874000                                                   --------->ALFIN1                                           <---------ANAC46                                           <---------bZIP60(2)                                           <---------bZIP60(1)                                           --------->O2                                           <---------O2                                           --------->TGA1a               <---------WOX13(1)          <---------TGA1a            <---------YAB1                 <---------ANAC58                                       <<<         <---------YAB1                 ----------->HVH21                                       <----    --------->ANAC58   <---------At4g35610 <---------ANAC58            --------->ARR14(2)   ---------    --------->ANAC58<-------TEIL     <---------TOE2(3) <---------At4g35610            ----------->GT1 -MYB46(1)--------->YAB1--------->YAB1  ----------->TGA1               <---------ARR14(2)  ---------- -MYB83  --------->ICU4--------->At4g35610----------->STF1         ------>ZmHOX2a(2)  <---------ANAC46   tttagcacgttatgatgatagattcatcagaacaagtttaatgtgacgtctatgtgtagctaattctgatctgtattcggtgagtctgtcgtaaaaagtc  9874100                                                                                          --------->MYB52(1)                                                                                         <-----------GT1                                                                                        --------->KAN4(2)                                                                                        <---------ARR14(2)                                                                                       --------->KAN4(1)                                                                                       <---------KAN4(1)                                                                                       <----------TaMYB80                                                                                      <---------KAN4(2)   <---------WRKY45                                         <---------ICU4         --------->LBD16   <---------WRKY38(1)                                --------->YAB1             <---------LBD16   <---------WRKY12                                  <---------YAB1            <---------ARR14(2)  <<<<<<<<<<WRKY6                                  --------->YAB1              --------->ARR14(2)  --------->WRKY18(1)                             ===========================================MADS_MADS  <<<<<<<<<<WRKY11                                <---------YAB1           ----------------->AG <<<<<<<<<WRKY18                                  --------------->AGL15    ----------------->AGL1 -----WRKY12          <---------WOX13(1)          <---------------AGL15    <-----------------AGL1 >DAG2          --------->TOE1(2)              --------->GLK1(2)    ------------>CBF  ---------->TaMYB80 >DOF2          --------->TOE2(2)       >>>>>>>>>>MYB80  --------->YAB1   --------->MYB52(1)       --   aatggtcaacaatataaacatgggattgacaatttgacatcaaaccaaaattctgataatagtaatcacttgcaattaccgaaaccggaatataccggtt  9874200                                            --------->LBD16                                           <---------HSFB2a(2)                                      <---------ANAC58                                     <-------TEIL                                   --------->ARR14(2)                           <---------HSFB2a(2)   --------->ARR11(3)        ---------->DOF2             <---------WOX13(1)    <---------GLK1(2)                     <xxxxxxxxxxxxxxxxsmallRNA(i)            <------------CBF       <---------ARR14(2)                   >>>>>>>>>TBF1          <---------AHL20(2)      *TSS<---------ANAC58     --------->REM1(2)          <---------YAB1   --------->HSFB2a(2)   <---------ARR11(3)  >>>>>>>>>TBF1                ---  --------->MYB52(1)      <---------LBD16  --------->HSFB2a(2)    >>>>>>>>>TBF1          <---------GLK1(1) ------->ANAC55(2)       <---------LBD16   <-----------RAV1(2) >>>>>>>>>TBF1             --------->GLK1(1)   tacttatcggttttaattgatattttcttcgggaacagattcgtcccagaagaactctctgtgaagaagaagaagaagaaagatggagaagaaatctcag  9874300            <---------At4g35610            --------->At4g35610            <---------ZAT2        ------->GAMYB       --------->ANAC46      --------->At4g35610     <---------DOF5.7(2)                                    <-----------GT1     --------->MYB52(1)                                  <---------ICU4    <---------WRKY38(1)                             <---------ZAT14                              <---    <---------WRKY45       <---------At4g35610      --------->ZAT14                              ----    <---------WRKY12 <---------ANAC58        <---------DOF5.7(2)                                 <---   --------->DOF5.7(2)     --------->At4g35610    --------------->AtSPL8                        -----  <-----------HVH21  <---------ANAC58      --------->DOF5.7(2)                      <----------DOF2 ------>GLK1(1)      <---------ANAC46<-----------RAV1(2)--------->ICU4        <-----------GT1--------   atttcgtcaacggaagctgttttccttggagctctagctccaggcgttaatgtctgtactaatttctcttcgaattcttgttacctctttgtggatgttt  9874400                                                                    <---------At4g35610                                                                <---------ARR14(2)                                                                --------->ARR14(2)                                                              <----------DOF2                                                             <---------ANAC58                                                             <---------ANAC58                                                          <-------TEIL                                                         --------->GLK1(2)      --------->TOE2(3)                                  --------->CCA1(2)      --------->TOE1(3)                                 --------->ARR11(1)      <-----------------AGL3                            --------->ARR14(2)      ----------------->AGL3                            <---------ARR14(2) ---MYB83                     <---------LBD16           <---------GLK1(2) ------->GT1        <---------YAB1                    <---------TOE2(3) ---MYB46(1)      ------>ZmHOX2a(2)                   ----------->ARR10 ---->MYB59       ----------->GT1                   <XXXXXXXXXXXXXXXXXXXXMIR2112-5P ->ATHB12       <---------ARR14(2)    ----------->RAV1(1)--------->ARR14(1)              <----------DOF2   ggttaaaaccctaatttggatcgtgattttgtccagggtccaacatggaacacattgagattcgcgtttctgctactgggtctatgtctagctttcatgc  9874500                                               <----------DOF2                      ------>ZmHOX2a(1)                                <---------ANAC58                                   --------->TOE2(3)                     --------->WOX13(1)       <---------ANAC58                     --------------->AGL15           >>>>>>>>>>>>>>>>>LFY <---------ANAC46         <---------YAB1           <-----------------AG       <----------DOF2          <---------ANAC58   <---------YAB1                 <-----------------AGL1      <---------ANAC58     <-----------RAV1(1)<---------ANAC58            <----------DOF2      <---------ANAC58 <---------ATHB12 <-----------RAV1(1)     <-----------ARR10------>ZmHOX2a(1)  <   tctctgtagctttcaccagtggccaatcaatgttgcttgttcatgttggctttctcattgttatcgcatctactctctttatcctcctcaattggtatgt  9874600             <---------CCA1(2)                                                                     --      <---------ANAC58                                                <----------DOF2         <------      <---------ANAC58                                            <---------MYB52(1)          -------    <-----------GT1              <----------DOF2            <----------DOF2                 --------- <---------ICU4         <---------YAB1                      <---------DAG2                  <-------- ---------DAG2  --------->TOE2(3)<---------DAG2    ------>ZmHOX2a(1)--------->MYB52(2)      ---------   caatttttgcttctcttatctcaattttgtttgagctttttctgtgttgattcctgttgaaacttttcgttactttctagggttttagacgaataagtaa  9874700  Previous    Next  AGI:  At1g28250.1    Description:  similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC84779.1) Range:  from: 9874234    to: 9875566    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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