Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <------MYB83        <------MYB46(1)        <---------ANAC55(2)        ----------->GT1                                                 --------->ARR14(2)       --------->MYB59                                                  <---------ARR14(2)       ----------->GT1<-------GAMYB                    --------->MYB52(1)     <---------ATHB12     --------->ARR14(2)<---------MYB52(1)  <---------MYB52(2)        --------->MYB46(3) ------>ZmHOX2a(2)  <------NtERF2         --------->ANAC58          --------->ANAC58 -------->At4g35610------>NtERF2          --------->ANAC58          --------->ANAC46            ----- ------->ARR11(3) --------->ANAC46        --------->ANAC46          --------->ANAC58     <---------DAG2 -------ZAT14     --------->DEAR3(1)  --------->HSFB2a(2)         <---------ALFIN1       <----------DOF2 ------ZAT6       <---------DEAR3(1)  <---------HSFB2a(2)     ------>ZmHOX2a(2)--------->YAB1   -----   tgatctggataggtaaaacgacgccgttaagtcccgtcttctccaaggaaccatagctactggatcgaacacccaatccagtcatcgttccctttacctt  9871800                                           ------>MYB83                                           ------>MYB46(1)                                         <---------MYB111(2)                                         --------->AtMYB61                                        --------->ANAC46                                        --------->ANAC58                                      --------->ANAC58                                      <---------ALFIN1                                      --------->ANAC46                --------->ANAC46      --------->ANAC58                --------->ANAC58    ----------->RAV1(1)           <---------ICU4     <---------ARR11(3)                                                <----          <---------YAB1      --------->ARR11(3)                                               ------        --------->YAB1       --------->RVE1(1)                                       --------->ANAC58       <---------ATHB12      --------->CCA1(1)                                --------->AGP1 <-------   --------->AHL20(2)  --------->AHL20(2)<---------MYB46(2)                  --------->At4g35610<---- <----------DOF2--------->ANAC58    <---------ALFIN1                         <---------At4g35610----- ->MYB83<---------ICU4--------->AHL20(2)--------->ANAC58           --------->ANAC46  --------->ANAC58 ->MYB46(1)--------->YAB1  --------->AHL20(2)                   --------->ZAT14<------ZmHOX2a(2)-----   cccctttaaatcatcatcactccattaaaaaaaatctcccacaccaaacttgaattcgatgtcttcttcactcaaattcagatcaacaagttaccaagga  9871900 -----ARR14(2)                                                                  --------->AHL20(2) --->YAB1                                                                      <---------ATHB12 --TOE2(3)             --------->GLK1(2)                                     --------->WOX13(1) -----ARR11(3)        <---------GLK1(2)          <---------At4g35610      --------->GLK1(2) ---->ARR11(3)   <---------ARR14(2)  ------>ZmHOX2a(2)             --------->YAB1                 --- ---->ARR14(2)   --------->ARR14(2)--------->AGP1--------->At4g35610 ---------->DOF2            -----   tattgttcaagttatcccaaattcgattctgggttctgatctacaaaattgagctcgaatagaatcgaatcaaaagaatcaatgaaatgaaatgggagaa  9872000                               <---------LBD16                            --------->HSFC1(2)                            <---------HSFC1(2)                            <---------HSFB2a(1)                             --------->CCA1(2)                            --------->HSFB2a(1)                            <---------ARR14(2)                           --------->GLK1(2)                               --------->ARR11(3)                           <---------ARR11(3)                              --------->ARR11(1)                           --------->ARR14(2)                              --------->ARR14(2)                           <---------ARR14(2)                         <------MYB83                           --------->ARR11(3)                         ----------->GT1                           <-----------ARR10                        <---------WOX13(1)                          <---------GLK1(2)                       --------->ATHB12        =================HOX2a_HOX2a                             <---------YAB1----------->GT1        <------ZmHOX2a(1) <---------ARR14(1)         --------->GLK1(2)<------MYB46(1) ------>YAB1        ---------->DOF2                  <---------ARR11(3)  ----------->ARR10     <----- ---->GLK1(2)     <------ZmHOX2a(2)                  --------->ARR11(3) <--------P  <---------YAB1   tcagaaggaaggagacacagatcaaagagaatcttcggatgaagaagataacaaaaatctagggtttgtgattggtagatatggtttttattcgtcagaa  9872100                            --------->ANAC46                            --------->ANAC58                        --------->ANAC58                 <-----------GT1                        --------->ANAC46            ---------->DOF2                               *TSS                ------->TEIL--------->ANAC58 --------->ANAC58                           --------->AHL20(2)     --------->AHL20(2) --------->ANAC58     --------->ANAC58                   --------->MYB46(3)<<< ----GLK1(2) <---------ATHB12         ---------->DOF2--------->DAG2        --------->HSFB2a(2) ------   ttttcaaaaaattcaatgaatctcacacacaagccattaacaaaggcaaacaaaaaaagtcactctctctcgcccttctctaacaaacaaaaaaatactg  9872200                                          <---------ICU4                      <---------YAB1                                       --------->ANAC55(2)                  --------->YAB1                                       <---------ANAC55(2)                 <---------YAB1                                      <-------TEIL                       --------->YAB1                               --------->AHL20(2)  --------->DOF5.7(2)  --------->ICU4                              --------->AHL20(2)  <----------DOF2   ------------>CBF                           --------->AHL20(2)   --------->LBD16   --------->DAG2 <<<<<<WRKY18             <---------AHL20(2)   <---------ANAC46  --------->DAG2               <------ ----->GT1                --------->AHL20(2)  <---------LBD16   ---------->DOF2           -----------   tcaaaaatttggacgatgaaataaacaaataaataaaaaatacataattccgcgttaacaaaaacaaaaaggcaattttgataattcttctatccaattt  9872300                                                                             ------->TEIL                                                                         <---------TOE2(3)                                                                       --------->AHL20(2)                                               <-----------GT1         <---------AHL20(2)                                          <----------DOF2       ----------->GT1 ---DAG2                               <-----------GT1      <---------AHL20(2)                 ------ ->CBF                            <---------ANAC46          --------->AHL20(2)                 <-----   ttgtctatttctacatttttaaaatttttgtctgtgtcttatttctttataacttgattcaaaaaattgttaattaatgtatgtaataagccctaatata  9872400                                             <---------ARR11(1)                                             --------->ARR11(3)                                            <---------CCA1(2)                                     <--------P                                     <---------MYB52(1)                              --------->AHL20(2)       <---------AHL20(2)     --------->AHL20(1)       --------->AHL20(2)     <---------AHL20(2)                              <-----------GT1   ----- --->AHL20(2)                --------->AHL20(2)                       <-----------GT1  <---------TOE2(3) ----AHL20(2)       ----------->GT1<---------MYB46(3)             --------->ICU4      --------->MYB52(1)   aatccaaaattaaaaacattgtctgtaaaaaaaaaattggttagtcaaatcttttgatatgactagtgagtattactaatttacaaattaacgaaaattt  9872500                                                              --------->ARR11(3)                                                              <---------ARR11(3)                         --------->YAB1                  <---------AHL20(2)                        ----------->GT1                  <---------AHL20(1)                <---------YAB1                           --------->AHL20(1)         <---------AHL20(2)   --------->RVE1(1)          --------->AHL20(2)        <---------AHL20(2)   <---------ARR11(3)         <---------AHL20(2)                          -        --------->AHL20(2)   --------->GLK1(2)          --------->AHL20(2)                         --  --------->ANAC58   <---------AHL20(2)           <---------AHL20(2)                               <-  --------->ANAC58  --------->AHL20(2)        <---------AHL20(2)                                   <-  ----------->GT1--------->YAB1       <----------DOF2 --------->YAB1                              <-- ----->DOF2  <---------YAB1  --------->ARR11(3)   --------->AHL20(2)   <-----------GT1  <-----------GT1   aagcacgttataaatttgattataaaatgaaaatctctgtctttctatgtaattaaaaataaattatcttgtattacacttggcgatttgttactggatg  9872600           <-----------GT1          <---------AHL20(2)  ----------->GT1 <------NtERF2                                       <-----------RAV1(1) ----------->GT1                                    <---------YAB1 -------->LBD16             <---------HSFC1(2)    --------->ATHB51           <---------YAB1 ------->ALFIN1   <---------YAB1                  -------->ATHB1           --------->YAB1           - --------DEAR3(1) --------->AHL20(2)              --------->YAB1           <--------HAHB4           < --------ANAC46   <---------AHL20(2)             --------->ICU4           <---------YAB1          <-- -------LBD16>>>>>>>>>MYB98 --------->HSFC1(2)   <---------YAB1          ------->TEIL    ----------->HVH21   ggcggggaaaattttaacatataattaagaagcttagaaaattaagaggctattattgttgtccaaacactcatgtatcattatagagtttgtgacaact  9872700  Previous    Next  AGI:  At1g28240.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53040.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53040.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN81089.1); contains InterPro domain Protein of unknown function DUF616 (InterPro:IPR006852) Range:  from: 9868303    to: 9872198    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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