Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <---------ARR14(2)       ------>MYB83                                      --------->ARR11(3)       ------>MYB46(1)                                   <---------ARR11(1)     <---------MYB59                                     <---------ARR11(3)     <---------MYB111(2)                                 --------->ARR14(2)     --------->AtMYB61                                  <---------CCA1(2)     <---------MYB46(2)                              <-------TEIL     --------->MYB46(3)                           <------MYB83     <---------MYB111(1)                          <------MYB46(1)    --------->ANAC58                          <---------MYB46(3)    --------->ANAC58        <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    --------->ANAC46       <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               <---------ARR14(2)   ------->TEIL           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          xxxxxxxxxxxxxxxxxx>smallRNA(fl3) --------->ZAT18   <---------ARR14(2)         <-----------RAV1(1)--------->YAB1   <---------WOX13(1) <---------ZAT18   --------->ARR14(2)  <----------DOF2  <---------GLK1(1)   --------->ARR14(2) ------   taatgcaccaaacttttgtcatatatgctcaactaggtcatcttttagttgttggtgcatatctctatcacgaagtcgaattcgattgccaaaaatgttg  9854100                                                                     <---------YAB1                                                                   --------->YAB1                 <--         ----------->GT1                                           <---------ICU4                ----    --------->AHL20(2)                                            <---------YAB1                 <---   --------->YAB1 <---------AHL20(2) <---------AHL20(2)           --------->ICU4              -------  --------->AHL20(2)             <---------YAB1          <---------AHL20(2)               --------->ZAT6 ----->GT1        --------->AHL20(2) --------->AHL20(2)  --------->YAB1 <---------YAB1<---------MYB52(2)   taaaataaaaatagaaaattttaaatgtttgttttctaattaaaaaaaaactattgtatttataagttattattatgtttaatgcttaactaacaccaat  9854200                               <---------AHL20(2)                   ------->TEIL                               <---------YAB1                 <---------AHL20(2)              <---------AHL20(2)                             <---------AHL20(2)  --------->YAB1              --------->AHL20(2)         <---------AHL20(2)  --------->AHL20(2)       --------->AHL20(2)    ----------->GT1 <---------YAB1 <---------AHL20(2)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->AHL20(2) -------AHL20(2)    <-----------GT1      ----------->GT1 --------->AHL20(2) ----->AHL20(2)    --------->AHL20(2)  <---------ANAC58 <---------AHL20(2) ------AHL20(2)    <---------AHL20(2)  <---------ANAC58 <---------AHL20(1)  ----------->GT1     ----- -->WOX13(1)  --------->AHL20(2)     --------->ARR11(3) --------->AHL20(2)---------->DOF2   ---------   taaataatattcgtatataatttaaacatatatataatagagcttgttatatagataatttaattttatgaattttaaaagtaaaaaaaaaaaaaaaaat  9854300                                <---------YAB1                   <---------TOE2(3)     --------->AHL20(2)             --------->AHL20(2) --------->AHL20(2)               <---------AHL20(2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)              ---------->DOF2                        <----     ---------->DOF2      --------->AHL20(2)  --------->YAB1     --------->AHL20(2)            ------ ---->AHL20(2)  <---------WOX13(1)       <---------AHL20(2)----------->GT1                  --------- >AHL20(2)   <---------AHL20(2) <---------AHL20(2)  ---------->DOF2  --------->YAB1        ----------   aaacatataaagtatttaattgatgttataaaatataaatgattttatttataacaaagaaaagaaattaatgacaagatgacatttggaagagagataa  9854400                                                                 --------->AHL20(1)                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                          <---------YAB1                                                         <---------AHL20(2)                                                       <---------YAB1                                                     <---------ICU4                                                     -------->ATHB1                                                     --------->YAB1                                                    --------->AHL20(2)                                                    --------->ICU4                         <---------ARR11(3)         <---------AHL20(2)                         --------->AHL20(1)         --------->AHL20(1)       <---------YAB1 -----AHL20(2)           --------->ARR11(3)         <---------YAB1<---------YAB1 --->AHL20(2)            <---------AHL20(1)      <---------AHL20(2)         <---------TOE2(3)  ------ -->GT1      <---------------AGL15               --------->AHL20(2)      <---------WOX13(1)   <------ ->GT1       --------------->AGL15           --------->AHL20(2)  <---------AHL20(1)        <---------AHL20(2)   aatttctccaagtttctcatttcagaaaatattctaaaaaaaactgattaaaaaattattattttaatatttttgatttatgtttgtttggaatttatca  9854500                                                   ------>ZmHOX2a(1)                          <------                                                <-----------GT1                            <-------TEIL --->YAB1          --------->ZAT6              <-----------GT1                         ----------->ARR10 ---YAB1         <-----------GT1 *TSS      <---------MYB52(1)  <----------DOF2    --------->AtLEC2   tggaaatggtctaagggtttaactctcaaaatcaaaaacctctccgttttttcctctctgtttagctttgaattcacaagagtcatgcgaagattcaact  9854600                                                                                           <---------ICU4                                                                                          --------->ICU4                                                                                          <---------ATHB12                                                                                   <---------At4g35610                                                     <----------DOF2               <---------ZAT2                                               <<<<<<<<<TBF1                       --------->At4g35610 ---At4g35610                   <-------TEIL<<<<<<<<<TBF1                  ------>ZmHOX2a(1)    -----   gggtttgttttcttcatccctctctagatttagcttcatcgttttcttcttcttcctttcaattttgaaattgagtcctcgagagagctgaaatcatttt  9854700                            <---------ANAC46                           <------NtERF2                          ------>NtERF2                         --------->ANAC46                        <---------------------WRI1                        <---------At4g35610                        <---------LBD16                                    <---------TOE1(3)                        --------->At4g35610                   <------ZmHOX2a(2)                  <------MYB46(1)                         --------->LBD16  <---------TOE2(3)                  <------MYB83                           <---------ANAC55(2)                  --------->HSFB2a(1)              <---------YAB1     <---------ANAC46                 <---------TOE2(2)  --------->ANAC58     --------->ANAC55(2)     <---------YAB1 <---------ARR14(2)          <----------DOF2       <---------ANAC58    <---------TOE2(3)  <-----------RAV1(1)   --------->ARR11(3)       <---------ANAC58 ---------->DOF2  <---------AHL20(2)--------->ARR14(2)       <---------ARR11(3)------>ZmHOX2a(2) ----------->GT1 ------>GT1      <---------TOE1(2)  --------->ANAC58    <---------LBD16<-----------HVH21    ---------   gtaatttatgtttatatcgtaggttctgcggcatgtacaagctcgaagaacttttgattccgcgatcggattgcgtcaaggtaatgtataaaagttgtta  9854800                           <---------ANAC58                           <---------ANAC58                                                 <--------                --------->TOE2(3)                                                           ---------   <---------ZAT6     <---------ICU4  --------->DAG2                                        <--------  <---------TOE2(3)  <---------DAG2  ---------->DOF2      <-------TEIL                      --------- -->GT1   --------->ATHB12 <---------ANAC46  --------->YAB1--------->YAB1      ---------->ID1       <   aactagggttattgatttcgtcaatttttgcttgtttcaaaaaggaatcaaaaactgacattcatatgctcttcgaggtttatcgccttctctgagctga  9854900                       ------->GAMYB                      --------->MYB46(3)                     ------>MYB46(1)                     ------>MYB83                    --------->MYB52(1)               ------->GAMYB              <---------MYB52(2)              --------->DEAR3(2)              --------->MYB46(3)                                              <---------At4g35610         --------->ANAC46                                             <---------YAB1 <---------ANAC46  --------->TOE1(2)                                --------->YAB1 -At4g35610  <---------At4g35610                                   ----------->GT1             <----- >At4g35610 ----------->RAV1(1)                                    <---------ZAT6              <----- -ZAT2<---------ARR14(2)                                     <---------TOE2(3)--------->At4g35610 >ZAT2--------->ARR14(2)                             <---------GLK1(2)--------->ICU4       <--------- ---------TOE2(3)  --------->AtMYB61              --------->YAB1 ----------->GT1          <----------DOF2   tttaggtgtatatgcaacagaccaacgacaatgtcaagttttttggggtttattagaatttctaatgtagtgataattttagctgaaatggggttttagg  9855000  Previous    Next  AGI:  At1g28210.1    Description:  ATJ1 (Arabidopsis thaliana DnaJ homologue 1); heat shock protein binding / unfolded protein binding. Identical to Chaperone protein dnaJ 1, mitochondrial precursor (ATJ1) [Arabidopsis Thaliana] (GB:Q38813;GB:Q8GXI3;GB:Q9FZ94); similar to GFA2 (GAMETOPHYTIC FACTOR 2), heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT5G48030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61649.1); contains InterPro domain Heat shock protein DnaJ, cysteine-rich region; (InterPro:IPR001305); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, Range:  from: 9854533    to: 9860145    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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