Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------ANAC46                        =====================                                        <-----------RAV1(1)                     ------>ZmHOX2a(2)                                     <---------MYB52(1)                         =====================         <---------MYB52(1)       <------NtERF2                                <------ZmHOX2a(2)        <-------GAMYB            ------>NtERF2                        ---------->DOF2       <--------     <---------At4g35610        <---------ALFIN1          <------NtERF2        ======================   <--------P                   --------->DEAR3(1)      <---------DEAR3(1)    <---------ARR11(3) ---------TOE2(3)            --------->ANAC58           --------->ALFIN1      --------->ARR11(3) ---------AtMYB61            --------->ANAC46       <---------TOE1(3)<------ZmHOX2a(1)      --------- ---------TOE1(3)            --------->ANAC58   <----------DOF2      =================HOX2a_HOX2a ------>RAV1(2)            ---------->DOF2   <---------ANAC46  <---------MYB46(3)    <---------HSFB2a(2) ---->At4g35610         --------->AtMYB61    ----------->GT1  <---------AtMYB61====================== >MYB52(1)      ----------------------->TaNAC69(2)  <---------TOE2(3)==================HOX2a_HOX2a   ctgaggttgctgttgagtcttcttcaccaaaacgccaccgttttgtggggttttaagggtggcgatggtgaggaaagagagatcgttcttgaagaaatct  9847500        <------ZmHOX2a(1)     <------ZmHOX2a(1) ==============HOX2a_HOX2a                                                                   -------- ===========HOX2a_HOX2a                                                    <---------ZAT6    -------- -GLK1(1)               ------>MYB83                                  <---------REM1(1)      <------- ===========HOX2a_HOX2a ------>MYB46(1)                            <---------TOE1(1)         <------- >GLK1(1)             <---------MYB59                              <---------TOE2(1)   ------>ZmHOX2a(2) ==============HOX2a_HOX2a                                      <-----------HVH21    --------->AGP1   gatgggaggaggaagtagttgagacctagcttaagtgtttcggtttcagacagaacaggggttttctgtccgatgtagagtaagtctgatctacagattt  9847600                                                                        ----------->HVH21                                                                      <------ZmHOX2a(2)                                                                      <---------At4g35610                                                                      --------->At4g35610                                                                     --------->ARR14(2)             <                                                                     <---------AGP1               <--                                                                     <-----------ARR10            <--                                                                     <---------ARR14(2)        <-----                                                                   <---------DEAR3(2)         <------                                                                <-----------HVH21            --------                                                               --------->DEAR3(1)            <-------                                             ------>ZmHOX2a(2)<---------HSFC1(2)           ------>NtERF2                                    --------->ANAC55(2)       --------->HSFC1(2)           --------->LBD16                                    --------->ANAC46          <---------HSFB2a(1)          <------NtERF2 ->ARR14(2)          --------->At4g35610    <------ZmHOX2a(2) --------->MYB46(3)       <---------SPL7 ->ARR11(3)          <---------At4g35610--------->SPL7        --------->DEAR3(2)  --------->ATHB12<-- --ARR14(2)       <---------MYB52(1)<---------ANAC55(2) ---------->DOF2------>ZmHOX2a(2) --------->SPL7 --GLK1(2)   <----------DOF2       <---------LBD16   ----------->GT1<---------CCA1(2)  <-----------HVH21   tgtgttttgggaagtcttttgttagctctgagactactacgggacgatcgtagacttgtaaagaaccgtcggatctgacgagcttgattcgtccgccgtt  9847700     <------MYB83     <------MYB46(1)    --------->MYB59 ---------MYB46(3)                                                          <----------DOF2 -------ANAC46                                                            <---------ZAT2 -------ANAC58                                                  --------->ZAT18 ----MYB52(1)                                                   --------->ZAT14 -GAMYB                   ---------->DOF2              <----------DOF2    --------->ZAT2 --------->YAB1 ->DEAR3(1)           <----------ID1                   <---------DAG2  --------->LBD16   <---------ICU4 --MYB46(3)      <------ZmHOX2a(1)           <----------DOF2    <---------ZAT18         --------->ICU4 -------ANAC58 <---------------------WRI1<------ZmHOX2a(1)      <---------ZAT14         <---------YAB1   gctggttcggtctggtcgaggatgaagacaaagccaacttgaaggacctttgtgtagctttacgagtagactcccgagctttgtgatgttatcatgaccc  9847800                                                                              <------ZmHOX2a(1)                          --------->TOE2(3)                                 <---------ANAC46                          <----------DOF2                                --------->ALFIN1                 <---------LBD16                         --------->ICU4<---------ANAC46                --------->ALFIN1                     --------->ARR11(3)--------->ALFIN1             --------->ARR14(2)                >>>>>>>>>TBF1         <---------ANAC46             <---------ARR14(2)          <---------HSFB2a(2)         <---------ANAC58        --------->At4g35610              <---------------AGL15       <---------ANAC58        --------->ZAT2--------->GLK1(1)  --------->HSFB2a(2)  --------->ARR11(3)   atttagtataagctggatttgggggtttctttaatcttctctgctagaagaagaaggtcatgaagaaattggtgtgtggaggagagagagagatagagtt  9847900                                           <-----------TBP                                           --------->AHL20(2)                                           <---------AHL20(2)                            ----------->TBP                                         <-----------TBP                        <-----------GT1            --------->ZAT18          ----------->GT1                           <-----------GT1          *TSS                     <---------ANAC46                    ---------->DOF2 <----------DOF2         <---------ZAT6         <---------AtMYB61              <-----------GT1<---------AHL20(2)   ttggagtttcagtgtgaacaaatgaaatgaagttttggtttgtatatatatacactgagagtattttacatacaaaagaatttatctccctttaaaaatg  9848000                                                                                            <--------                                                                                           <---------ANAC58                                                       ----------->GT1            --------->AHL20(2)                                                       <------MYB46(1)           <---------ATHB51                                                      --------->MYB59            <---------ATHB12                          --------->CCA1(2)      --------->AHL20(2)              --------->AHL20(2)                         --------->AHL20(1)      <---------AHL20(1)              <---------AHL20(2)              --------->YAB1          ------>ZmHOX2a(1)<------MYB83   --------->PCF2       <---------ANAC58      ------------>CBF  --------->AHL20(2)       <---------AHL20(2)   ------>NtERF2 <---------YAB1   tgtttgttttcaattttcatattcaaatatatgagttctccttcatttcattttatttggtaaacaaataggggcccaaacaaataatttttggctttca  9848100                                                                --------->AHL20(2)                                                                --------->AHL20(1)                                                                <---------AHL20(2)                                                                <---------AHL20(1)--------->ARR14(2)                                                               --------->AHL20(2) --------->ZAT14                                  <----------DOF2              <---------AHL20(2) <---------ARR14(2)                         <-----------GT1                   --------->AHL20(2) <---------ICU4                    <----------DOF2                     <----------DOF2      --------->ICU4              <-----------GT1  <---------ARR11(3)       --------->TOE2(3)  --------->YAB1      ------          <---------AHL20(2)<---------DAG2           <---------AHL20(2)<-----------GT1         <----- --DOF2   --------->AHL20(2)<----------DOF2          <-----------GT1<---------ICU4<---------ZAT14   agaaaaattcaattttttacatctttttcactttatctttttggctaatttcaatttactttaaaataaatttttactaataagtatactcatctattaa  9848200           <---------AHL20(2)       <---------AHL20(2)                                                               --------->TOE2(3)     <---------RVE1(1)                                                 --------->AHL20(2)    <---------ARR11(3)                                  --------->AtLEC2     <---------AHL20(2)    <---------GLK1(2)                       ---------->ID1             <---------AHL20(2)    --------->ARR11(3)                     <-----------GT1         --------->AHL20(2)   <---------DAG2 --->AHL20(2)          <---------MYB52(1) <<<<<<<<<<GT-3b         <---------AHL20(2) <---------ALFIN1 ----AHL20(2) <-----------GT1  --------->ICU4 <----------DOF2<-------TEIL  <---------AHL20(2)    ----   tatacagattttttttattccattcgtttagtaatgttttgtatttttcttttttttcatgcatacatattatttatatttttatgcacaccttatatgt  9848300                                                           <------MYB83                            --                                                           <------MYB46(1)                       ----                                  ---------->DOF2         --------->MYB59                       -----                              <----------DOF2             <---------AtMYB61                   -------                        <-------TEIL        <---------ARR14(2)                            ----------- --->TEIL            --------->GLK1(1)     <---------GLK1(1)                  <---------YAB1  <------   atatgtttcaactatgttatcggacatccatgctttaaaagttggatatatggactaggtttggtccaagtatgttaactgtgattaagaagcgattaaa  9848400  Previous    Next  AGI:  At1g28190.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G12340.1); similar to unknown [Picea sitchensis] (GB:ABK21062.1) Range:  from: 9846871    to: 9847910    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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