Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <---------AtMYB61                 ------>ZmHOX2a(1)                 <----------DOF2       <---------YAB1                                       ---------->DOF2    <-----------------AGL1                              ------->GAMYB  <---------WRKY18(1)                                  --------->DEAR3(1) ------YAB1 <------MYB46(1)                            --------->ANAC58                <-----------GT1 -----GLK1(2) ---------->ID1                         <---------ALFIN1       --------->ARR14(2) ---YAB1--------->ATHB12                            <---------ALFIN1------->TEIL------>ZmHOX2a(1) -At4g35610 <------MYB83            <---------MYB52(1) --------->ANAC58     <---------ARR14(2)    <--   ttcttgaccaagattggtccttttggtctaaatggtccgttttctgagaatgccccaacgcccaaagatgaacatccaggtcctgcatttatccacattt  9806500                                       <-------GAMYB                                      --------->MYB111(2)                                      --------->MYB55(2)            --------->MYB46(3)           <-----------GT1            --------->MYB52(2)           ------->TEIL        <---------AHL20(2)            --------->MYB111(1)       <---------MYB52(2)        <---------ICU4                <---------MYB46(3) --------->CCA1(2)        --------->AHL20(2)         <------MYB83         --------->ARR11(3)    <---------AHL20(2)             <------MYB46(1)      --------->ARR14(2)           <------ZmHOX2a(1)    --------->AHL20(2)            --------->MYB59       <---------ARR11(3)        <---------At4g35610   --------->AHL20(2)      ----------->GT1              <---------ARR14(2)        --------->At4g35610 ---------GT1         --------->YAB1 <--------P       ----------->ARR10         <-----------RAV1(2)   tcacatttaattttttctaatctactataatgtaatttggtagttgagagtgagtgaagatttgaaacgaacctccattgagccagaggacgagaggttt  9806600                                                                       --------->ARR14(2)                                                                       <---------ARR14(2)                                                                    <---------TGA2(1)                                                           ----------->HVH21                                                           --------->ETT(2)                       ---         <------MYB83                                      <---------ETT(2)--------->LBD16       <---         <------MYB46(1)                           <---------ANAC46 --------->TGA2(1)           <----        <---------AtMYB61                          <---------ANAC58 --------->bZIP60(1)     ---------       <---------WOX13(1)    ----------->GT1       <---------ANAC58 <---------bZIP60(1) --------->GLK1(1)     --------->ATHB12 <------NtERF2     --------->ZAT14   <------NtERF2--------->MYB52(1)   <-------- <------ZmHOX2a(1)  <---------DEAR3(1)  <---------ZAT18 <---------ANAC46 <---------LBD16<---------GLK1(1)   agaggatggattggtttctgcctcggcgaagtagtaaaacagagctctctgtttcttgtcgtcgacagtgacataaccggagtattgctgaaatccgacc  9806700      <---------LBD16      -------->ZAP1    <---------WRKY18(1)   --------->WRKY38(1)   --------->WRKY12   --------->WRKY45         ------>ZmHOX2a(2)   ----------->HVH21      <---------AGP1   --------->ZAT6  <--------P              --------->ARR14(2) <-------GAMYB     ----------->HVH21      --------->ZAT14 ------>LBD16     <-----------HVH21       <---------ZAT14                <---------YAB1 ------LBD16 --------->MYB52(1)     <---------PCF2                --------->ALFIN1 -----LBD16 <---------WRKY38(1)  --------->ALFIN1        <-----------HVH21          ---------->DOF2 -->HVH21   <---------WRKY12==============================HOX2a_HOX2a   <---------ARR11(3) -ETT(1)--------->LBD16   <---------ARR14(2)       <------ZmHOX2a(1)    --------->ARR11(3)         --   cggggttgaccgggtaaacgggtgactcgatctgagtgggacagaacactagaggagaccgtgagagagtggaagataattagagcaaaagagattgtga  9806800                                --------->MYB55(2)                           --------->HSFB2a(2)                     <-----------GT1                   <-----------HVH21                  <---------bZIP60(1)    <---------HSFB2a(2)                  <---------TGA2(1) <------MYB83                         <----------DOF2                  --------->TGA2(1) <------MYB46(1)                    ------->TEIL                  --------->bZIP60(1)<<<<<<<<<<MYB80                <---------WOX13(1)    <---------ALFIN1         <------ZmHOX2a(1) <---------HSFB2a(2)                   <---------ZAT6    *TSS<-----------GT1 ------->ATHB12--------->ICU4   <---------MYB46(3)       <------ZmHOX2a(1)      <----------DOF2     <   gccattggagaggagacatgatgtcacttctcggtgtttggtttgagaagaagtgaagaggagactagtgatggactttggtctttgttttcccacttgc  9806900                        <---------DAG2         <---------WOX13(1)      --------->ANAC58                        <----------DOF2       <------------CBF     <---------ANAC55(2)                    <-----------GT1          --------->ATHB12      --------->ANAC46                   <-------TEIL             <---------YAB1  ----------------->AGL1                 <---------GLK1(2)          <---------AHL20(2)     --------->ANAC55(2)                 <---------ARR14(2)    <---------DAG2       ----------------->AG                 --------->ARR14(2) <-----------GT1        <---------At5g28300        --------->AHL20(2)          ------->TEIL ----------->GT1--------->ARR14(2)        <---------AHL20(2)       <---------ANAC55(2)      <-----------GT1    <---------AHL20(2) -----      <-----------TBP  <---------DAG2  <----------DOF2 <---------ICU4  --------->ANAC58         <---- ----------DOF2<---------YAB1    --------->ANAC55(2)  --------->ICU4--------->LBD16          --------   tcctttgcatttatatcaagattcacctttttcttatgtaacttttttaattggtaatatttaccacatccgtaagaaatttatctcatcagtaacattt  9807000                                                                      --------->ATHB51                                                                      <---------AHL20(2)                              <------NtERF2                           <---------ICU4                   <---------ICU4                                    --------->ICU4<-----------GT1             ----------->GT1 ------>NtERF2                        <---------AHL20(2)        ---------->DOF2--------->MYB52(1)                         --------->AHL20(2) ---->AHL20(2)    --------->ICU4  <---------ICU4               <----------DOF2    <---------AHL20(2)< -----AHL20(2)--------->At5g28300--------->ICU4         <-----------GT1   <---------AHL20(2)       <- ->TOE2(3) <---------LBD16   --------->ABI4(2)      <---------AHL20(1)--------->AHL20(2)       <-----   atttagtcaaaaatgcggtaaaaattagcggtgccattactacaaatctattagtatatttctctcttttaattatttcattttttaatcgttttatttt  9807100                                                     ----------->GT1     --------->AHL20(1)               <---------ARR11(3)                                            <     <---------AHL20(1)               --------->ARR11(3)           --------------->AGL15           <-    <---------------AGL15            --------->RVE1(1)     <---------ICU4                          --   <-----------------AGL3            --------->CCA1(1)    --------->ICU4                    <--------   =================================================================================MADS_MADS-------- ---------MYB52(1)               --------->AHL20(2) --------->DAG2----------------->AGL3    <-------- ------GAMYB                   ----------->GT1     ---------->DOF2----------------->AGL2    --------- ------GT1                   ---------->DOF2  ----------->GT1 <-----------GT1      --------------->AtSPL8   ccgttaatatatatggcgataatgtaatagaaaaagaaaatatctatgaagaaaaaagtaaaaattactccatatatagtttttctatgtacaatatata  9807200                                                                <---------ARR11(3)                                                                --------->ARR11(3)                                                               --------->YAB1                                                              <---------YAB1                                                              <---------TOE2(3)                                                        --------->ICU4                                                        <---------YAB1                                                      <---------ICU4                                                      -------->HAHB4                                                      <---------AHL20(2)                                                      --------->ATHB51                                                      -------->ATHB1 ---------GLK1(1)                                     --------->YAB1 --------ARR11(3)                                     <--------HAHB4 ------->ARR11(3)                                    <---------YAB1 -ARR11(3)                                           <---------ATHB51 ->CCA1(2)          <---------YAB1                --------->AHL20(2)                     --------->ARR11(3) -AHL20(1)   <---------AHL20(2)    --------->ATHB12  --------->ICU4                      <---------ARR11(3) >AHL20(1)--------->AHL20(1)      <---------YAB1  <---------AHL20(2)                    --------->YAB1   agatttcacacatatattatttgtcattacaagtatatcattgagtttttgtttaattattattaagataattcttctaagtctaaaaaatgatattgag  9807300               ---------->DOF2                                    --------->ARR11(3)         --------->AHL20(1)             --------->HSFB2a(2)       <---------ARR11(3)         <---------AHL20(2)             <---------HSFB2a(2)      --------->RVE1(1)       <---------GLK1(2)         --------->AHL20(2)         <---------DAG2               --------->CCA1(1)   ---------->DOF2   <---------TOE2(3)                <----------DOF2          --------->AHL20(2) ----------->RAV1(1) -   atgttaagaaataaaataaaagtatagaaaacatctaactttttggaactaaaactgtttcaaaaaaatatctaacattttgcaacaaaaagaatatcaa  9807400  Previous    Next  AGI:  At1g28110.1    Description:  SCPL45; serine carboxypeptidase. Identical to Serine carboxypeptidase-like 45 precursor (SCPL45) [Arabidopsis Thaliana] (GB:Q93Y09;GB:Q9C7E2); similar to SCPL46 (serine carboxypeptidase-like 46), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT2G33530.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81275.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68676.1); similar to Serine carboxypeptidase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93967.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) Range:  from: 9803852    to: 9806883    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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