Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         ---------->ID1                                                                                      <-------GAMYB                                                                         <---------MYB52(1)                                                                        --------->TOE2(3)                                                               <----------DOF2       <---------MYB46(3)                                                 <---------AHL20(2)     --------->TOE1(3)        <---        <------ZmHOX2a(1)         <-----------GT1--------->AHL20(2) <-----------GT1  --------->MYB52(2) -TOE2(3)                  ------->TEIL    ---------->DOF2     <---------DAG2      <---------MYB52(1)   acacaaactaggaacaatatgtgttcatgtatgttttaaacttacaaaagtttaattgtattctactttattacccttaatttctgtttgttgtcatatt  9795300                    ---------->DOF2                 ------>ZmHOX2a(2)               <---------ARR11(3)           --------->CCA1(2)                                              <<<<<<<GRF7          <-----          <---------ARR11(3)                                            =======================HOX2a_HOX2a          --------->ARR11(1)              --------->MYB55(2)      <------MYB83                 ------          --------->ARR11(3)              <---------MYB46(3)      <---------MYB46(3)          <------          --------->ARR14(2)          <---------DEAR3(1)          <------MYB46(1)             -------          <---------ARR14(2)       <---------ZAT2                 <---------DEAR3(2)    <------ZmHOX2a(2)        ----------->ARR10          --------->ZAT2               <---------MYB52(1)     <---------ARR14(2)      <---------At4g35610          --------->At4g35610        <-----------RAV1(1)      --------->ARR14(2) --------GT1   --------->ARR11(3)  <---------At4g35610  <-----------GT1 ------>ZmHOX2a(1)     <------   ttctgttcagaagatatgatctaaaagacttgaacacagctcggtgtttggatttgttttacaactgttggttcctgacaaactaaaccgatccaattta  9795400          <---------AHL20(2)         <---------AHL20(2)         --------->AHL20(2)     <---------AHL20(1)                                                                    <---------ARR14(2)     <---------AHL20(2)                                            <-----------GT1         --------->ARR14(2)     --------->AHL20(1)                                         <---------YAB1       --------->ARR14(2)     --------->AHL20(2)                                       <---------ICU4--------->ANAC55(1)    --------->AHL20(2)                                        <---------AHL20(2)     <---------ARR14(2) ----AHL20(2)                          --------->AHL20(2)     --------->ATHB51      ------>MYB83 --->AHL20(2)                     --------->ZAT14             --------->AHL20(2)    ------>MYB46(1) ---AHL20(2)          --------->AHL20(2)                     --------->ICU4 --------->ANAC58 -->AHL20(2)--------->ARR11(3)    --------->ZAT18            <---------YAB1 --------->ANAC58 ---AHL20(1)<---------ARR11(3)    <---------ZAT14       ----------->GT1     --------->ANAC46    -----   attcgaataaattaaatcttataagaaaatacaaactacactaaaatatggatagaatgtgtaattatttttctatacacgaaaccaaatccgaatacac  9795500                          <---------AHL20(1)                          --------->AHL20(1)                          --------->AHL20(2)                          <---------AHL20(2)                         --------->AHL20(2)                     <---------AHL20(2)                    <---------AHL20(2)      --------->AHL20(1)              ------>MYB83                    --------->AHL20(2)      --------->ARR11(3)              ------>MYB46(1)                   --------->YAB1 --------->YAB1                          --------->MYB46(3)      --------->AHL20(2) <---------AHL20(2) <---------AHL20(1)            <---------MYB46(2) <------- ---->ANAC46  <---------MYB59  --------->YAB1    <---------AHL20(2)      --------->ANAC46    --------   ttcaaaaaaaaaatgaccgaattttaattttatttataaaaacatatatattgaattaacatgaactaatacttcaccaaacacacacataccaattttt  9795600                                                                           --------->DAG2                                                                        --------->AHL20(2)        --------->At5g28300   --------->TOE2(3)                         --------->YAB1       ----------->GT1        <---------MYB59          <---------MYB52(1) ---------->DOF2      <------------AtMYB77   ----------------->AG<---------ZAT14       <---------ATHB12  --------->At5g28300        ----------------->AGL1   <-------GAMYB------------>CBF               --- --AHL20(2)                 -------->P       <------ZmHOX2a(1)   <---------PCF2     ------>ZmHOX2a(1) ->AHL20(2)            <------ZmHOX2a(1)  <---------ICU4         <---------PCF5  <---------YAB1<-----   tagcagtaactgtaaatctatatcaggacttacctaaatcgaaatcaggactggaccgttatggacgggcccaataaaaagttatccttctaatgggctt  9795700                                                                    ------>ZmHOX2a(2)                                                             --------->GLK1(2)         --------->ARR11(3)                                 <---------GLK1(2)         <-----------ARR10                           ======================HOX2a_HOX2a         <---------ARR11(3)                      *TSS------>ZmHOX2a(1)           <<<<<<<<<TBF1         <---------ARR11(1)                   <---------CCA1(2)    <------ZmHOX2a(2)        <---------CCA1(2)  --------->ARR11(3) --------->At4g35610 <---------ARR14(2)     <------NtERF2         <---------ARR11(3) <---------At4g35610 --------->ARR14(2)           ------ ------->DOF2    <---------AHL20(2)    ---------->DOF2    <---------TOE2(3)<---------At4g35610 ------ -----DOF2     <---------YAB1        --------->LBD16 =====================HOX2a_HOX2a    ------>NtERF2   taaaggcctcatatcttattattttcaactatcttcttccccaaaggcatctctccttctaagattccgatctgtttagcttcttcttctccgactctcg  9795800                                                                               <---------SPL7                                                                               <---------RAP2.6(3)   ----------->GT1                                                             <-----------HVH21   <---------ANAC46                <---------SPL7                              ------>NtERF2   <---------ANAC58               <---------ANAC58  <------NtERF2             <---------ANAC58   <---------ANAC58               <---------ANAC46 ------>NtERF2--------->ARR11(3)  <-----------------------TaNAC69(2)            <---------RAP2.3(1)           <---------ANAC58 --->ANAC55(2)                    <---------ANAC58<---------DEAR3(1)          --------->DEAR3(1) --->YAB1             <----------DOF2       <----------DOF2 ---------->DOF2  --------------->AtSPL3   taatgtcgtgatatgttcaataagctttcttcaatggcgtatggttctttcggcgtctcatcaaaagctctagtctattgccgtccctgctatggctcca  9795900          <----------DOF2     ------>ZmHOX2a(2)    <---------GLK1(1)    --------->GLK1(1)    <------ZmHOX2a(2)               <---------ANAC58   --------->ARR14(3)      <---------WRKY12   --------->ARR14(2)    --------->TOE2(3)   <---------ARR11(3)   --------->ANAC58   --------->ARR11(3)   --------->ANAC58   <---------ARR14(2)  --------->SPL7           <----------DOF2     <---------YAB1  <---------GLK1(1)    ------->TEIL <---------ANAC58    <----------DOF2                    <---------   ttagagatctccctttctccctccgaacgtcaacagtttcgtctcccgctcttttccgctttgaaactctatgattcagttccatcttctatatttcctt  9796000                                                            <-----------RAV1(1)                                                         <---------DEAR3(1)                                                        <---------At4g35610                                                        --------->At4g35610                                                      <---------RAP2.3(2)                        --------->LBD16               <---------RRTF1(2)                       --------->ANAC58               <---------ANAC58                       --------->ANAC58               <---------ANAC46                      ----------------->AGL3          <---------ANAC58                      <-----------------AGL3          <---------RAP2.6(2)                   ------->GAMYB                     <---------LBD16             <---------HSFB2a(2)                  <---------MYB52(2)                 --------->RAP2.6(3)         --------->HSFB2a(2)                  --------->MYB46(3)             --------->ATHB12            <---------ALFIN1       -             --------->MYB52(1)               <------MYB83  --------->ALFIN1<---------ZAT2          -           <---------MYB52(2)                 <------MYB46(1)      --------->At4g35610    -----------           <---------MYB46(2)               <---------WOX13(1)     <---------At4g35610    <---------ANAC46 --GT1     <---------MYB111(1)           <---------YAB1<---------RAP2.3(1)  <---------At4g35610     -   cttcaccttcgtaactaacaacgacccgaaaatgggtattgttcagattggtcattgcggctgtgttggagctatcgcagcacctagaaatgttgtgaaa  9796100                           --------->YAB1               <---------ANAC58               <---------ANAC46               <---------ANAC58    --------->ANAC58    --------->YAB1      <---------YAB1    --------->ANAC58   --------->ICU4    --------->GLK1(2) -------->ANAC58       <---------YAB1   --------->ARR11(3)    --------->DAG2             --------->LBD16 -------->ANAC46    --------->ICU4      <---------ARR14(2)   ---------->DOF2        ---------->DOF2 >GT1     ---------->DOF2 <---------YAB1<---------GLK1(2) --------->YAB1  <---------YAB1<---------ANAC46 -------->ANAC58    <---------YAB1      --------->ARR14(2)--------->AHL20(2)       <---------ATHB12   cctcgcaaggaagaaagtcgtggtgattatcattcttttgaagattctgattctattcaataaaaaagttgcgatttttattctaatgaagcgggaattg  9796200  Previous    Next  AGI:  At1g28090.1    Description:  polynucleotide adenylyltransferase family protein. similar to polynucleotide adenylyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G23690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68671.1); contains InterPro domain Polynucleotide adenylyltransferase region; (InterPro:IPR002646) Range:  from: 9795749    to: 9799050    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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