Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       ----------->GT1                                                                 <---------TOE2(3)                                                                 <---------YAB1                 ---------->ID1                                --------->AHL20(2)               <---------ANAC58                               --------->ICU4               <---------ANAC58                               <---------YAB1           <---------DAG2                                   <---------ICU4         <---------ARR11(3)      --------->AHL20(2)        <---------AHL20(2)     <------ZmHOX2a(1)  ---------->DOF2                    <---------ATHB51                        --   <---------TOE2(3)------>ZmHOX2a(1)                      --------->AHL20(2)                     ---   --------->ANAC46 <----------DOF2                        --------->ICU4                     <------ -DOF2   --------->ARR11(3)      ---------->DOF2<----------DOF2<---------AHL20(2)           ---------   catataaggaatacctttcgtccttttaaagtcaataaaacccaaataaacttttacagaaataattaatattgtttattcattttgagtaagaaaaaga  9789400                                              ------>ZmHOX2a(2)                                  --------->ANAC55(2)                                         <------                                  <---------ANAC58                                           <-------                                  <---------ANAC46                             <---------CCA1(1)   --------->ZAT14                <---------ANAC55(2)                          <---------RVE1(1)   <---------ZAT14      <----------DOF2     <---------ARR11(3)                --------->ARR11(3) ------->DAG2      <---------AHL20(2)------->TEIL                             <---------ARR11(3) ------->DOF2  --------->AHL20(2) <---------ANAC55(1) ------->TEIL    --------->ATHB51       -------- ----ID1       <---------AHL20(2) <---------ANAC58    <-------TEIL    <---------ICU4     <---------AHL20(2) ->DOF2   ------>ZmHOX2a(1)<-----------GT1  --------->ARR11(3)     --------->YAB1   <---------YAB1 --   aaaagtgtagtcctaaattatataaacttttacattacgtatatatgatctctacgtacatgaaatttttcataatttcagatatttctattgaattaaa  9789500                                                                                   --------->ARR11(3)                      --------->ANAC46                      ---------->DOF2        <---------GLK1(2)                      --------->ANAC58            <---------HSFC1(2)               <---------ARR11(3)                      --------->ANAC58            --------->HSFC1(2)             ----------->ARR10  < ---AHL20(2)        <---------ALFIN1             --------->ANAC58          ---------->DOF2       <--- --AHL20(2)       <---------ALFIN1           --------->ANAC46         --------->MYB52(1)         ---- ->AHL20(2)    --------->AtMYB61<----------DOF2  --------->ANAC58    <---------AHL20(2)  ---------->DOF2 --------->HVH21<-----------HVH21    <-----------GT1   <---------------AGL15 ----------->GT1    -----   tctgacagacagagagaccatcacacccctctctctttcttacattcccacaagcttccaaacaaagagaattaatggaaagtaagattttcaaaggaat  9789600                                               <------------CBF                                              --------->ATHB51                                              --------->ATHB12                    ----------->GT1                                              -------->ATHB1                   ---------->DOF2                                             <---------YAB1                   <---------AHL20(2)                                             <---------AHL20(2)              <---------AHL20(2)                                             <---------ATHB51             <---------ICU4                                        --------->AHL20(2)               --------->ICU4<---------AHL20(2)          --------->TOE2(1)       --------->ANAC58                       --------->AHL20(2)         ------>ZmHOX2a(1)        --------->ANAC58                       <---------ATHB51 -----------GT1           --------->MYB46(3) --------->AHL20(1)          <---------AHL20(2)--------->AHL20(2) ------ICU4             --------->YAB1  <---------AHL20(2)            <---------AHL20(2)--------->AHL20(2) ----->ATHB51  ------>ZmHOX2a(1)  --------->ANAC46                   --------->AHL20(2)--------->AHL20(2) ---->ICU4--------->TOE1(1)   ------->GAMYB  --------->ICU4   ----------->GT1--------->AHL20(2)   aatttctcttcctcgtcctctctcactcacaaccctacgcatttaaaattattgaaaaactatgtagtatattaaataattaaaaggaaataaataaaca  9789700                      --------->ATHB12                      <---------ICU4                    --------->GLK1(2)     <---------ARR11(3)            --------->ANAC46   -------->P    <----------DOF2    <---------CCA1(2) --------->YAB1              --------->HSFB2a(2)  ------------>CBF<---------ARR14(2)   <---------MYB52(1) <--------HAHB4     --------->AtMYB61          <---------DAG2     --------->ARR14(2)   aaacccttatcttcttcatgagaatcatttcttctccacaaaaccataccttctctaacccctcttctcacttttcaataacccctccatatatgactca  9789800                                                                   --------->ANAC46                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                   --------->ANAC55(2)                                                                  <---------LBD16                                                                 <-----------GT1                                                               <-----------HVH21                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                             <-------GAMYB                                    ------>ZmHOX2a(1)       <---------MYB46(3)                      -             ----------------->AGL1--------->TOE2(3)        <---------DEAR3(2)                      -             ------------>CBF      --------->TOE1(3)    <---------RAP2.6(2)                    ------          ----------->HVH21     --------->ARR14(2)      --------->ANAC46                      <------        --------->At4g35610     <---------ARR14(2)      <---------RAP2.3(2)                   -------     ============================HOX2a_HOX2a           <---------LBD16            <---------YAB1-----     <------ZmHOX2a(2)    ------>ZmHOX2a(1)            <---------At5g28300     <---------YAB1 <------    --------->ARR11(3)--------->ARR14(2)   <----------DOF2 <---------DEAR3(1)  --------->ICU4 <------    <---------ARR11(3)<---------ARR14(2)   <---------DAG2<---------RAP2.3(1) --------->YAB1   <------   tgctgagatcatatgaccaatatggttcctcttgaatcctcaacgcttttcggtgtttacggcggtttcacggactcgatgatgatgagagaaacaacta  9789900           ------>ZmHOX2a(2)          <------ZmHOX2a(2)         --------->ARR14(2)         <---------ARR14(3)         <---------ARR14(2)         <---------ARR11(3)     --------->YAB1    <---------ATHB12  --------->WOX13(1)                          ----------->RAV1(1) --------->MYB46(3)                     <------ZmHOX2a(2) ----->MYB46(1)                --------->ANAC55(2)               --------->YAB1 ----->MYB83                   <---------ANAC58                 <---------YAB1                      < ->GAMYB --------->ARR11(3)    <---------ANAC46               <---------ICU4                        - ---MYB111(1)                  <---------ANAC58 <-----------RAV1(2)    --------->ARR11(3)           - -->MYB46(3)           <-------TEIL    --------->ARR14(2)    <---------YAB1                      ---- --->P   --------->ARR14(3)    <---------ANAC55(1)  --------->ARR14(2) <---------ARR11(3)        ---- ---MYB55(2)          --------->CCA1(2)<---------ARR14(2)    --------->ICU4                      ---- ---MYB52(2) ==================================HOX2a_HOX2a--------->ICU4                       ------ ---MYB111(2)------>ZmHOX2a(1) <---------ANAC55(2) <---------GLK1(2)<-----------GT1      ---------->DOF2   ccaacaatcaagatcctagtggagatacatgttccgtctccgatccagcaccaggttctactgattattataacatctcttcttctccagtgaaagacga  9790000           <---------MYB52(2)         ---------->DOF2       <------NtERF2      ----------->RAV1(1)      ------>NtERF2  --------->ANAC58  --------->MYB46(3)  --------->ANAC58 --------->SPL7            ---------->ID1                <---------ARR14(2)                    ------ --------->RAP2.6(3)     --------->MYB52(2)              --------->ARR14(2)                    ------ ---------ARR14(2)       <---------MYB46(3)        <----------ID1       --------->MYB59        ------ -------->ARR14(2)      <---------TOE1(2)        ---------->DOF2        <---------TOE2(3)      ------ -------->MYB52(1)     <---------MYB52(1)        <---------ICU4     <---------At4g35610        <----- ----->ANAC46     --------->O2     <---------TOE2(3)     --------->ARR11(3)                   <------ ----->ANAC58     <---------O2     <---------TOE1(3)     <-----------ARR10                  <-------- ----->ANAC58     --------->bZIP60(1)         --------->YAB1        --------->At4g35610 <------ZmHOX2a(1) --->MYB52(1)     <---------bZIP60(1)       <<<<<<<<<<GATA-1      <------NtERF2    <----------CDC5   cggaacggccccaaagaacgacgtcgtttgttctattaacgtagacgataataaagacaaatcttggctccgcttaggtataggccctgaggagaacacg  9790100                                                                                                -----                                                                                              <------                                                                                              <------                                                                                             <-------GAMYB                                                                                             --------  <---------ANAC58                                                                          <--------  <---------ANAC58                                                                        <---------LBD16  <---------ANAC46                                                                        --------->LBD16 --->ANAC55(1)                                                     <---------ZAT2        --------->DEAR3(1) --->ANAC46                                                   --------->At4g35610        ------------ --->ANAC58                                                   <---------ZAT2             ------->GAMYB --->ANAC58                        --------->ANAC58           --------->ZAT2        ================= ----ANAC55(2)                     --------->ANAC58           <---------At4g35610   ------>ZmHOX2a(1) ---LBD16               <---------REM1(1)--------->ALFIN1  ---------->DOF2         --------->TOE2(3) -ZAT14    --------->At4g35610   --------->MYB52(1)    --------->ATHB12 ---------->ID1  --------->MYB46(3)   gatggctcgtataagctccaacgttgttgtagcaaaaacggaagtggaagagagaattcattagagctgagcttgttctcttcatcctcaaccgcggtta  9790200                          <------------AtMYB77                        --------->MYB52(1)                     --------->ANAC58                     --------->ANAC46                     --------->ANAC58                  --------->At1g77200                  ------->GAMYB                  --------->DEAR3(1)                 --------->DEAR3(2)                 --------->MYB46(3)                                               <------MYB83                --------->MYB52(1)                                                <------MYB46(1)                -------->P--------->MYB46(3)   <---------ICU4                     <---------MYB46(3)                ------>MYB83                   --------->YAB1                    <---------TOE2(2)                ------>MYB46(1)               <---------YAB1                     <---------TOE1(2)               --------->MYB55(1)             --------->ICU4                  <---------MYB46(3)              <---------MYB111(2)           --------->YAB1             --------->WRKY38(1)              --------->MYB46(3)          <---------ARR11(3)           --------->WRKY12            -- ---->MYB52(2)<---------MYB111(1)        <---------CCA1(2)            --------->ALFIN1             <- ---MYB52(1)  <---------MYB55(2)     ------>NtERF2                  <---------ANAC46            ----- --P     <---------ARR11(3)         --------->RAP2.6(2)             <---------ANAC58       <---------MYB55(2) ->At5g28300  <---------MYB46(2)  <---------ZAT2 --------->ICU4     <---------ANAC58       --------->MYB46(3) -MYB46(3)<------ZmHOX2a(2)       --------->ZAT2 <---------YAB1    <-------TEIL <---------MYB52(1)<-- >AtMYB77--------->ARR11(3)       <---------At4g35610         <---------TOE2(3)<-------GAMYB------->GAMYB ================HOX2a_HOX2a      --------->At4g35610   <---------MYB52(1)--------->DEAR3(2)---------   gtagtagtatagatcacctaccgacgcaaccgttgcagctgccatatcatcatgatcagttattgacgatgcgtggaccgtcgttggtttacaaccacca  9790300  Previous    Next  AGI:  At1g28080.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70056.1); contains domain RING FINGER PROTEIN (PTHR10825:SF1); contains domain RING FINGER PROTEIN (PTHR10825) Range:  from: 9789813    to: 9791533    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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