Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <------ZmHOX2a(2)                                                                   <---------ARR14(2)                                                                   --------->ARR14(2)                                                                  <------NtERF2                                                             <---------DEAR3(1)                                                         ------>MYB83------>ZmHOX2a(2)                                   --------->DEAR3(1)    ------>MYB46(1)                             <---------ALFIN1         --------->HSFB2a(1)                         --------->At4g35610   --------->LBD16   <---------DEAR3(2)                         <---------ZAT2        ----------->GT1   <---------MYB46(3)                 <                        --------->ANAC58     <---------LBD16 --------->ANAC46                       <                        --------->ANAC58    --------->MYB52(1) <---------LBD16                      <                --------->DAG2   ------->GAMYB------->GAMYB<---------ALFIN1                         <               ---------->DOF2  --------->DEAR3(1)    <---------HSFB2a(1)            <---------ARR14(2)   <---------ATHB12  --------->At4g35610  --------->MYB46(3)<---------LBD16      --------->At4g35610<   tccaaatcaagtccccataaagcagcaagctccaacgccgatggacaaccggaaaaaccttccacggcggatcgaacatgagcatcggaaactgaacaac  9777400                                                                                          --------->CCA1(2)                                                                                          <------ZmHOX2a(2)                                                                                         <-----------ARR10                                                                                         <---------ARR11(3)                                                                                         <---------AGP1                                                                                         --------->AGP1                                                                                         --------->ARR11(3)                                                                                         --------->ARR14(2)                                                                                 --------->ATHB51                                                                                 --------->YAB1     <               --------->YAB1                                      <---------ANAC58      <---------ARR14(2)              <---------ATHB12                         --------->MYB52(1)        <---------ICU4   ---            --------->WOX13(1)                         ------>MYB46(1)          --------->ICU4    === --------->LBD16                                     --------->DEAR3(1)     --------->LBD16------>ZmHOX2a(2) ---------ANAC58         <<<<<<<GRF7                --------->ANAC55(1)    --------->ANAC46========== ---------ANAC55(2)    ----------->HVH21            --------->ANAC46     <---------At5g28300     ==== ---------ANAC46       ------>ZmHOX2a(1)            --------->ANAC58     <---------DOF5.7(2)     <--- ---------ANAC55(1)  ----------->RAV1(2)            --------->ANAC58   --------->DOF5.7(2)=========== ---------ANAC58 <---------ALFIN1    <---------GLK1(2) ------>MYB83<---------ANAC58     <---------CCA1(2)   ttccgtgaacatcccaatcacactcctgacacaaaatcagattatcggtgaaacaccgaacagagactggctcgttaccgcaattatcgcagatctgaga  9777500           ------>ZmHOX2a(1)   <-------MYC4   ------->MYC4   <-------MYC2   <-------MYC3   <-------PIF4   ------->PIF5   ------->PIF4                                                                                  ----   ------->MYC3                                                                                  ----   <-------PIF5                                                                                 -----   ------->MYC2            <---------ANAC46                                                     <----  --------->TGA1a      <-------TEIL                                                           <------  <---------TGA1a    <---------ARR14(2)                                                      -------- <---------TOE1(2)   <---------GLK1(2)                                --------->RAP2.6(3) ------->GAMYB ------------>OsbHLH66--------->ARR14(1)                    <---------GLK1(2)             ----------- ------------OsbHLH66--------->ARR11(1)                    <---------ZAT2                 --------->DEAR3(1) --->ZmHOX2a(2)      --------->ARR14(2)                    --------->At4g35610           --------->MYB46(3) =================HOX2a_HOX2a                              <---------At4g35610           --------->DEAR3(2) =================HOX2a_HOX2a   --------->ZAT18            --------->ZAT2      --------->ANAC46 ----- =================HOX2a_HOX2a   <---------ZAT18 --------->ANAC46     --------->ARR14(2)<---------ARR14(2) ---ZmHOX2a(2)  ----------->RAV1(1)             --------->ANAC58     <---------ARR14(2)--------->ARR14(2) =================HOX2a_HOX2a   <---------ZAT14 --------->ANAC58   <---------SPL7      --------->MYB52(1)   tcgcacgtgcttcctcgacaacagattcgccgtgtgaacttgctgatcacaaggcaaacacagcttcgccgtatcggctctacaaaacaaaaccgccgta  9777600      <------NtERF2     <---------At4g35610     --------->LBD16     --------->At4g35610     <------NtERF2     ------>NtERF2    ----------->RAV1(1)    --------->DEAR3(1)   --------->RAP2.3(1) --------->ANAC58 --------->ANAC46 <---------DEAR3(1) --------->ANAC58 ----->ANAC58        --------->ZAT14                                                      <---------AHL20(2) ----->ANAC58    --------->ANAC58                                                         --------->AHL20(2) ---->ZAT14      --------->ANAC58                                                        --------->AHL20(1) -----ZAT18      --------->ANAC46                                                        --------->AHL20(2) ---SPL7         --------------->AtSPL8                                                  <---------AHL20(2) ->DEAR3(1) <---------------AtSPL3          ------->GAMYB                                <---------AHL20(1) ------->SPL14  --------->SPL7           --------->MYB52(1)                        --------->YAB1 ---->SPL7--------->GLK1(1)           --------->YAB1                         --------->YAB1   cgctcgccgcagaaatcgcacggtactctctccgaactactcataactgactctctctcaaaatccctaaaattcgaaatcaaaatcagaatttattttc  9777700                                                                                                   --                      <---------ICU4                                                               --                     --------->ICU4                                                                <-                   --------->YAB1                                                                  --           --------->At5g28300                                                                     <-          ----------->GT1                                                                          <-         <---------DEAR3(1)                                                                 ---------        <---------------------WRI1                                                    --------->ICU4        <---------ORA47(1)                     <-----------GT1             <---------DEAR3(1)     <--       <------ZmHOX2a(1)<---------YAB1    --------->ANAC55(2)           <---------LBD16<---------ICU4     <---------TOE2(3)--------->YAB1     <---------TOE1(2)   <----------DOF2   <----------DOF2   *TSS   agagactaaggacggtgagaagaatgatgacaaatccatttctcacgtttttcattttgaactctttttttttttggggggctttgtcaaaattatctgc  9777800                                  <---------YAB1                                 <------------CBF                                --------->ATHB12                                <---------ICU4                                <---------AHL20(2)     --------->HSFB2a(2)        --------->ATHB51  <----------DOF2               -------->HAHB4 ------->ARR14(2)               -------->ATHB1 ------->GLK1(2)               --------->ICU4 --------ARR11(1)              <---------ATHB51 ------->ARR11(3)              <---------YAB1 --------ARR11(3)              <---------ATHB12 --------ARR14(2)           <---------------AGL15                                                 <-- >At4g35610              ------->TEIL              <--------P         --------->ALFIN1         <----- -------CCA1(2)     --------->MYB52(1)            <-------GAMYB       <-----------RAV1(1)  <---------ANAC46   aaatcttttggaatgaagaagacaacgaagctaattattgtaaacagtttggggttagggatttgtttttctgtgttgcgatgtatggaacttgtgtatg  9777900                              --------->MYB52(1)                             ----------->HVH21                             ----------->TGA1                            ------>ZmHOX2a(2)                           --------->At4g35610                           <------ZmHOX2a(2)                           --------->CCA1(2)                           <---------At4g35610                                              ---------                          <---------ARR11(3)                                           <---------WRKY18(1)                          --------->ARR14(2)                                          --------->WRKY45                          --------->AGP1                                              --------->WRKY12                          <---------ARR14(2)  --------->ZAT2                       <---------ANAC46                          --------->ARR11(3)  <---------ZAT2                  <---------HSFC1(2)                          <---------AGP1      <---------At4g35610             <---------At4g35610                         <---------GLK1(1)    --------->At4g35610             --------->At4g35610                 --------->CCA1(2)           --------->ALFIN1            <---------------------WRI1                --------->ARR11(3)          --------->ZAT18            <---------DEAR3(1)  <---------        <---------YAB1  ----------->ARR10  <---------ANAC58           --------->SPL7 --------->DOF5.7(2) -------WOX13(1)<---------ARR11(3)         <---------ANAC58<------NtERF2 <------NtERF2--------->WRKY38(1) ----YAB1     <---------TOE2(3)        ---------->DOF2    >>>>>>>>>>>>>>>>>LFY--------->HSFC1(2)    <   atggattgttcagattgagatatgttgagatctgacggtgtaaaagcgtgctgagagagtcgccattgttcagacggcgaagcttacgttgactgtgaca  9778000                                                  <---------TOE1(3)                                                  <---------TOE2(3)                                                 <-----------GT1               <---------ARR11(3)               <-----------GT1               --------->ARR11(3)       <---------ARR11(3)               <-----------ARR10       --------->CCA1(1) --------->DAG2 --------->GLK1(2)                     --------->RVE1(1)---------->DOF2                <---------YAB1 <-----------ARR10        <---------DAG2--------->ARR11(3)                      <-------MYC3 -->HVH21     --------->CCA1(1)   --------->TOE2(3)<---------ANAC46      ---------->DOF2 --HVH21      --------->RVE1(1)<-----------GT1 <---------AHL20(2)   --------->MYB59<---------ARR11(3) ---------GLK1(2)         <----------DOF2     --------->YAB1  ---------->DOF2   ------->MYC3    -----   gagaatctaagagaaaatatctaatctgctttttcacctaaatatctattttaacgtataaagggaaagttagttcaaagcacatgatttttatgggatt  9778100         <---------ARR14(2)         --------->ARR14(2)       --------->LBD16      <---------ANAC46      <---------ANAC58      --------------->AGL15      <---------ANAC58<----------DOF2      <---------------AGL15     <-----------------AGL1     <-----------------AGL2                                                            <---------At4g35610     ----------------->AGL2                                  --------->HSFC1(1)        --------->At4g35610     <-----------------AGL3             --------->RAP2.6(3)  <---------HSFC1(1)     --------->ZAT14     ----------------->AGL3            --------->MYB52(1)    <---------HSFB2a(2)    <---------ZAT14     ----------------->AG         --------->ZAT14            --------->HSFB2a(2)--------->HSFB2a(1)  <----------DOF2     <---------DAG2   <---------ICU4       <---------LBD16    ------->TEIL ---->AHL20(2)     <---------ARR11(3) --------->ICU4   <----------DOF2    <-----------GT1   aattctttccgtatatagcaataactttttgatcagtgtaataacggctggaatcgtctttttctggaactagtatttacgaacattgcagcgtaatgta  9778200                                                                            <---------CCA1(1)                                                                           --------->AHL20(1)                                                                           --------->ARR11(3)                                                                           <---------ARR11(3)                                                                    --------->YAB1                                                               --------->AHL20(2)                <---                                                               <---------AHL20(2)                <---                                                      ----------->GT1  ---------->DOF2 <-------TEIL                                     --------->ARR11(3)   <---------AHL20(2)<---------RVE1(1)   -----                 --------->YAB1      <---------ARR11(3)  --------->AHL20(2)<---------AHL20(1)   <----             <-------TEIL      --------->ANAC46    ----------->GT1  ----------->GT1 <------ZmHOX2a(1)    <---------AHL20(2)       <---------ALFIN1 ---------->DOF2 --------->AHL20(2)  <---------TOE2(3)   tagcatatatttatgtgcataataaactgctacacacgagttcttgacaaaagatgtgataaaattaaaatcgtaaagatattttaggattcatgttaga  9778300  Previous    Next  AGI:  At1g28050.1    Description:  zinc finger (B-box type) family protein. Identical to Zinc finger protein CONSTANS-LIKE 15 (COL15) [Arabidopsis Thaliana] (GB:Q9C7E8); similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT2G33500.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO70072.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 9775515    to: 9777797    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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