Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->LBD16                                                      ----------->HVH21               ------>NtERF2                                                    ----------->RAV1(2)              <---------ANAC58          <---------YAB1                           ------->TEIL                      <---------ANAC46    <---------DAG2<---------ANAC58                 --------->GLK1(2)                 <---------ANAC58    <----------DOF2      --------->ANAC58         <---------ARR14(2)         <----------DOF2      <--    --------------->AGL15--------->ANAC58         --------->ARR14(2)        <---------ANAC58      <-- <-----------GT1  <---------ANAC58       --------->MYB52(2)                 <---------ANAC58    <----   tttttactttttatgtttaggcttgtgaagcaagtgtttttgtttgtttcaagaacctgaagggtttatgtgagtattgcttttgtgccgcgtcttattt  9770700                         <---------ICU4                         --------->AHL20(2)                         --------->YAB1                         <---------AHL20(2)                         <---------AHL20(1)                         <--------ATHB1                        <---------YAB1                      <-------GAMYB                        --------->ICU4                     <---------MYB46(3)                      --------->YAB1                  <---------ANAC58            ---------->DOF2                           <---------ANAC58      <---------ANAC58  <---------ANAC58   <---------YAB1                   <---------ANAC46<---------YAB1  <---------ANAC58  <---------AHL20(2)           ------>MYB46(1)    <----------DOF2       --------->ANAC58 -------ANAC58      --------->AHL20(1)           ------>MYB83 <---------REM1(1)           --------->ANAC58 -------ANAC58      --------->AHL20(2)         <---------MYB59<---------MYB46(3)        ---------->DOF2 -----AHL20(2)     --------->YAB1      ----------->HVH21  <---------AtMYB61 <---------ANAC58      <--   tcttgggtactaacaaaagaattataataattttcagaaatgtgacagaccaaattgcttgtggttgtagcttttattgcttaagctctgtaaagcaagg  9770800                                                                     <---------TOE1(3)                              <---------YAB1                         <---------TOE2(3)                            --------->YAB1        --------->ATHB12  ---------->DOF2     <---------RVE1(1)                           <---------ATHB12  <---------YAB1       <---------YAB1        <---------CCA1(1)                           <---------ATHB51 --------->AHL20(2)  --------->YAB1         <---------ARR11(3)                  <---------DAG2        ----------->GT1         <--------HAHB4         --------->ARR11(3) --------DOF2     <----------DOF2  --------->KAN4(2)           <---------YAB1        <---------YAB1 -   cttttttttttgtatagcaacttttttcaattatgtttattctcgttaaaattgatttgtatactattattaaagttaacacatctcatgatattttgta  9770900                                              <---------YAB1                                              --------->ICU4                    --------->ANAC58        <---------ICU4                    --------->ANAC46        --------->ATHB12                    --------->ANAC55(2)     <--------HAHB4                    <---------O2      --------->YAB1                    --------->ANAC58--------->MYB52(1)                    --------->ANAC55(1)     --------->YAB1                   --------->ANAC55(2)                    <---------ANAC55(2)     --------->ATHB51      --------->YAB1         <------ZmHOX2a(2)         ------->GAMYB                  --------->TOE2(3)        --------->ARR11(3)        --------->MYB46(3)     <---------ICU4      <---------ANAC55(2)   <-        <---------ARR11(3)  --------->YAB1 --------->AHL20(2)    ----------->GT1                   <-       <---------At4g35610 <---------YAB1  --------->ICU4--------->YAB1<---------WOX13(1)         --- -------->ARR11(3)  --------->O2  <---------MYB52(2)    <-------TEIL<---------YAB1         --------->MYB46(3)   tacatcttcagatcatataaacacgtcttattatcaacaaacagaataattagtgacattcattacaatgttaattgatatgtattgacaacaacaactt  9771000                                                                                         --------->SPL1(2)                                                                                         --------->SPL7                                                                                        <---------SPL1(1)                                                   ----------->HVH21                    --------->SPL1(1)                                                   --------->ANAC58                    <---------SPL1(2)   <---------ANAC58                                --------->ANAC46                    <---------SPL7   <---------ANAC58                                --------->bZIP60(2)               <---------------AtSPL3 --------DAG2            --------->LBD16           --------->ANAC58                 ------->TEIL ---------DOF2        --------->MYB52(1)------->TEIL    --------->AtLEC2 --------->GLK1(2)       <--- ------>TOE2(3) <---------ETT(1) ------->TEIL      --------->O2   --------->YAB1    <----------------   cctttacgagcgtaagttccgacaaaccggacatgaaccatgaatcttgagccacgacatggaaacagtgatcacattctggtatgcaccgtacggtctc  9771100         --------->GLK1(2)        <---------ARR14(2)        --------->ARR14(2)                         <--------P                                 <------       <----------TaMYB80                         <---------MYB52(1)             <---------ANAC46     --------->YAB1                      <---------ICU4                          <---------ANAC58 <---------ANAC58                       <---------MYB52(1)                       <---------ANAC58 <---------ANAC58               <---------YAB1   --------->LBD16               <---------AHL20(2)  -- -------DOF2<---------YAB1   --------->ICU4     --------->ANAC46        --------->ZAT6 <---------YAB1 --SPL14--------->KAN4(2)  ---------->DOF2     <---------LBD16<----------DOF2  --------->ARR11(3)  <-   tttgctagcatattctgataaacaaatgggaaagatgataccattagtacccggtagccttctactttctcccaactctaatttcttgtatgattctatt  9771200                                                              <---------HSFB2a(2)                                                         --------->ATHB12                                                <---------MYB52(1)                     --------->AHL20(2)                                 <---------ALFIN1       <---------YAB1               <----------DOF2       <---------WRKY38(1)       --------->AtMYB61 --------->ANAC55(2)              --------->TOE2(3)      --------->WRKY18(1)       --------->MYB46(3) <---------ANAC55(2)            ---------->ID1     <-----------HVH21    ----------->HVH21   <---------MYB46(3)          ---------->DOF2      <----- ------CBF <---------ARR11(3) --------->AtMYB61<-------GAMYB  --------->HSFB2a(2)<-----------GT1 ------->ETT(2)       --------->MYB46(3)--------->O2    --------->ICU4--------->At4g35610      ------ --------ETT(2)    ----------->HVH21    <---------O2 <---------MYB52(1)--------->TOE2(3)    ---------   gtagaccggtcaagacctgtagtgaccactgaccacaacccctcgtggtcgttacgttatgattcgagaatcacctcaaagtttttcctttaaatcatat  9771300                                                       ------>MYB83                                          --------->YAB1--------->ARR14(2)                                          <-----------GT1                                    <-------                                         <---------YAB1------>MYB46(1)                 --------->AHL20(2) ----ARR14(2)                          --------->YAB1<---------MYB111(1)          --------->TOE2(3) --->ARR14(2)             --------->TOE2(3)------------>CBF                      <---------ANAC55(2)< >YAB1            <-----------GT1   --------->YAB1  --------->ANAC46       ---------->DOF2  ---------   atgccaaatcacaaactatttttctatttcttaaacaaaaattataacaattccaccaaatattctaaaaattcacttaaatcacctaaaaatataaaat  9771400                                                                              <---------YAB1                                                                              <---------AHL20(2)                           --------->ICU4                                     --------->AHL20(2)                           <---------YAB1                                    --------->AHL20(2)                        <---------YAB1                                       --------->AHL20(1)                    >>>>>>>>>ARR1                                            <---------AHL20(2)                    <------------CBF                                         <---------AHL20(1)                    >>>>>>>>>ARR1                                           --------->YAB1        <-------TEIL>>>>>>>>>ARR2                                       --------->AHL20(2)     <------ZmHOX2a(1)----------->GT1                                   <---------AHL20(2) <---------MYB52(1) >>>>>>>>>ARR2                                  --------->AHL20(2)               - --AHL20(2)        <------ZmHOX2a(1)                               <---------AHL20(2)               < ----------DOF2 <---------HSFB2a(2)                            --------->AHL20(2)                 --- >AHL20(2)      --------->HSFB2a(2)    <----------DOF2  <-----------GT1--------->YAB1           -----   tcctttaggattcattttctaggattgttattattaagagacttttctattttagttttgactgtttatataattttaatataattttcttatttcataa  9771500           <---------AHL20(2)          <---------AHL20(2)          --------->AHL20(2)          <---------AHL20(1)          --------->AHL20(1)      --------->AHL20(2)      <---------AHL20(2)      <---------YAB1                          --------->AHL20(2)     <---------AHL20(1)                       <---------AHL20(2)     --------->AHL20(2)                   --------->AHL20(2)     --------->AHL20(1)                   <---------ICU4        <---------ANAC55(2)  --------->AHL20(2)    --------->YAB1                        <---------AHL20(2)<------MYB46(1)   ------>ZmHOX2a(2) -------->AHL20(2)                       --------->ICU4     <------MYB83    <---------ARR11(3)      - ---------AHL20(2)          --------->YAB1--------->ATHB51 --------->MYB59  --------->ARR11(3)<------ ------>YAB1     <----------DOF2      <---------YAB1   --------->ATHB12   <---------YAB1      ------- ---->AHL20(2)<-----------GT1  <---------ICU4 <-----------TBP   --------->ANAC55(2)  <---------AHL20(2)   aaataaatataatttatttctttatgctattcataattttctaattatttatatagttgatttggtatgtaatcttatgatctatgtttaaatggtatgt  9771600  Previous    Next  AGI:  At1g28020.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G11380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69728.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 9768382    to: 9771144    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version