Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     ----------->GT1                                            <---------ANAC55(2)                                            ----------->GT1                       ------>ZmHOX2a(2)                                            <------MYB46(1)                      <------ZmHOX2a(2)         --------->YAB1                     <------MYB83                        --------->ARR11(3)         <---------ICU4                     --------->ANAC55(2)                 <---------ARR11(3)        <---------ATHB12                 --------->ARR14(2)             --------->ZAT18        --------->ICU4                   <---------ARR14(2)             <---------ZAT18         ----- ------>MYB83      --------->YAB1       <------ZmHOX2a(1)             --------->ZAT2            <---- ------>MYB46(1)  <---------ZAT6  ----------->RAV1(2)                 <---------At4g35610       <---- --------MYB59  ----------->GT1  -------->P--------->MYB59            --------->At4g35610       -----   acctaatgtaatcatgtctagtgataacaatccctaacctgaggataggtaactagaaaaatactaaaaacgagctcacttagatcccatccagtaagta  9675700                                                  ------>ZmHOX2a(2)                                                 --------->GLK1(1)                                                 <------ZmHOX2a(2)                                                 <---------GLK1(1)                                                <---------AGP1         <---------MYB59                        <---------ARR14(2)         ------->GAMYB                          --------->ARR14(2)         --------->AtMYB61                      <---------ARR11(3)      --------->WOX13(1)                        --------->ARR11(3)     <---------WRKY12                   --------->ANAC55(2)      --------->ANAC58     <---------WRKY38(1)                <---------ANAC55(2)      --------->ANAC46 ---->ZAT14          <---------LBD16 <------ZmHOX2a(2)      --------->ZAT14 -----ZAT14------>MYB83             <---------ARR11(3)      <---------ZAT14 ---TEIL--------->MYB46(3)          --------->ARR11(3)----------->RAV1(1)   ---------->DOF2     ----- ---->ZAT18------>MYB46(1)      ---------->DOF2<---------CCA1(2) --------->ANAC58              ------   cagtgagtcaaccaaacaaaaaactcggaatgcagaaagatcacttattagatctccaacagtatacaagcagaaatagaaagaaatgtttcagtaatca  9675800                                 <---------ARR14(2)                                 --------->ARR14(2)                                --------->ARR14(2)                                <---------ARR14(2)                              --------->DEAR3(1)                           --------->ANAC58                     <---------WOX13(1)                                                     ---------                   --------->ATHB12                                                         <--------                ----------->RAV1(2)           --------->ANAC58                             ==========                <---------At4g35610           --------->ANAC58                             <------ZmHOX2a(1)       ---------->DOF2    --------->SPL7     <------NtERF2               ------->TEIL<----------DOF2 ----->DOF2     --------->At4g35610       ------>NtERF2              --------->At5g28300 <---------TOE2(3) --->YAB1      ------->TEIL--------->ANAC58  <---------LBD16  <---------GLK1(2)<---------ARR11(3)   aagtgagaagaaagaagcacctgattggaacgccgaatcgcctcggcctcggaacgcttagacagattagcagtgaatctaaatctccttttaggattct  9675900       --------->At4g35610       <---------ZAT2       --------->ZAT2                   ----------->HVH21       <---------At4g35610              <---------SPL7     <-----------RAV1(2)               --------->TOE2(1)   <------ZmHOX2a(2)                   --------->TOE1(1)   ======================HOX2a_HOX2a  <---------At4g35610  --------->ARR14(2)           --------->ANAC58                --------->DEAR3(1)  <---------ARR14(2)           --------->DEAR3(1)       <-----------HVH21  <---------ANAC58 >ARR14(2)        ------>ZmHOX2a(1)   --------->At4g35610   --------->ANAC46 -GLK1(2)  <-----------ARR10   --------->ANAC58--------->ARR11(3)          <---------ANAC58 =========HOX2a_HOX2a          <---------ALFIN1<---------ARR11(3) --------->DEAR3(1) --------->At4g35610   tgacgatccagcagagcttcctccaacgctgcaacgcctcatcggacgagttcttcggcttcacatcgccgaagttttcgttcaagtagctctccatttc  9676000                                                                                   ----------->GT1                                                                                   <---------ANAC55(2)                                                                                 ------>ZmHOX2a(2)                                                                                <------ZmHOX2a(2)                                                                                --------->GLK1(1)                                                                                <---------GLK1(1)                              ----------->GT1                                  <---------ARR11(3)            --------->HSFB2a(2)                                                --------->ARR11(3)            <---------HSFB2a(2)              <---------At4g35610               <---------ARR14(2)        --------->ZAT14       <---------ANAC55(2)     <---------TOE2(3)        --------->ARR14(2) <---------At4g35610          --------->ANAC55(2)   --------->CCA1(2)       <---------TOE2(3) --------->ZAT2            <---------ARR14(2)--------->At4g35610        --------->GLK1(2)  <---------HSFB2a(2) --------->At4g35610  ----------->GT1      <-----------RAV1(2) ---------->DOF2 <---------AGP1   ttcagcttactactctcgaacaacgagtgaattcgtaactatacttcagatgagataagattagagaaagagagaatcaaggatctcgtaaatcgagaac  9676100       <---------YAB1     --------->CCA1(2)                   <---------ANAC58           <----------DOF2    --------->ARR11(3)                   <---------ANAC58          --------->TOE2(3)    --------->ARR14(2)                  <---------MYB46(3) <---------YAB1    <---------ARR14(2)            --------->YAB1        <---------YAB1    <---------ARR11(3)     --------->At4g35610         <------------CBF       --------->WRKY18(1) ---    --------->ARR11(1)     <---------At4g35610<----------DOF2   <-----------GT1  --------->ICU4   ---  ----------->ARR10        ------>ZmHOX2a(1)*TSS  <-----------GT1  <-----------------AGL3       <----   gaagaagatatgatatataacaagaagtcctctcactggtaatgggtgcttttaacttattgttatttacctttatatgggtcaagatgaagacgatgct  9676200                                  --------->HSFC1(2)                                  <---------HSFC1(2)                                  --------->HSFB2a(1)                          <-------TEIL  <---------At4g35610                       <---------ZAT2 <---------ANAC58                       <---------At4g35610           --------->ANAC58       <---------HSFB2a(1)     <------NtERF2     --------->At4g35610    <-----------HVH21--------->ZAT18  <---------ANAC46 ------>WRKY12       <---------ZAT18  <---------ANAC58        <---------ICU4                 -------- -------->HVH21 --------------------->WRI1                   ------>ZmHOX2a(1)          --------->HSFB2a(2) ------DOF2--------->ANAC58<---------ANAC46              <-----------GT1                <---------HSFB2a(2)   ttgacgcgtcgtctcgcactaagtgagcttcgtcgaagtttcgtctgcctgttctgaaatttcctcatggccatggttttttttttttttttggaacact  9676300                            --------->ANAC58                         --------->WRKY18(1)                    <---------At4g35610                    --------->ZAT2                    --------->At4g35610                   <----------DOF2                    <---------ZAT2  ---------->DOF2<---------ANAC58               <---------LBD16---------->DOF2      <---------ANAC46 <---------AHL20(2)<---------ARR14(2)              <---------ANAC58 ->ZAT6    ----------->HVH21--------->ANAC58 <-----------GT1         ---------->DOF2                <   catttattcggacatgactcggagctggtcaagaaagtcaaagctatttactgacttggactttatttcaacaaagtttttagtatattctaagttttgt  9676400                                          <-----------GT1                                         --------->AHL20(2)                                 ---------                                      --------->AHL20(2)                                    ---------                                   --------->YAB1                                          --------->ARR11(1)                                --------->YAB1                                             <---------ARR14(2)                            --------->AHL20(1)                                             --------->ARR11(3)                            <---------AHL20(1)                                             <---------GLK1(2)                            <---------AHL20(2)                                             --------->ARR14(2)                            --------->AHL20(2)                        <-----------GT1      <---------ARR11(3)                           <---------AHL20(2)                      <---------ICU4 <----------ID1     ---------->ID1        --------->AHL20(2)                     --------->ICU4  --------->ANAC46 <- ----------DOF2      --------->ANAC46 --------->ATHB51     ---------->DOF2---------->DOF2----------->ARR10   gacttttgtccattagaaatttcacacaaataaattagaataatttactaagtatattttctaaagaaatttttacaaaagtagacgaaaaaagatttgc  9676500                                                                      --------->LBD16                                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                    <---------LBD16                                                                    --------->TOE1(2)                                                                   <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                   ----------->RAV1(2)                                                                 <---------At5g28300                                                             ------>MYB83                                                             ------>MYB46(1)                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                         xxxxxxxxxxxxxxxx>smallRNA(i)--------->LBD16                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                        <----------DOF2    <---------MYB59         <---------ICU4                                      ---------->ID1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    --------->TOE2(3) <-----     <---------ANAC58          --------->ANAC55(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         ------     <---------ANAC58        <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  --------->YAB1---- >ARR14(1) ---------->DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <-----------GT1   --------->ICU4 ---- >CCA1(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)-------->HAHB4---- --------YAB1    <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2) <---------ATHB51   tctcattgtttgtcaaagtgagaactggttttcacgttttgtcttttcattcaatttcggaccaaattaccctgggaaaacttaataatggcataaacca  9676600  Previous    Next  AGI:  At1g27770.1    Description:  ACA1 (autoinhibited Ca2+ -ATPase 1); calcium-transporting ATPase/ calmodulin binding. Identical to Calcium-transporting ATPase 1, chloroplast precursor (ACA1) [Arabidopsis Thaliana] (GB:Q37145;GB:Q37146;GB:Q42571;GB:Q42587;GB:Q9SFY1); similar to ACA2 (CALCIUM ATPASE 2), calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G37640.1); similar to calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7) [Arabidopsis thaliana] (TAIR:AT2G22950.1); similar to ACA11 (AUTOINHIBITED CA2+-ATPASE 11), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G57330.1); similar to plasma membrane Ca2+ Range:  from: 9671625    to: 9676144    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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