Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <------NtERF2       ------>NtERF2      ----------->HVH21      --------->DEAR3(1)      --------->At1g77200     --------->DEAR3(2)     --------->RAP2.3(1)                                                <---------ANAC58     --------->ATERF1(1)             <------NtERF2                      --------------------->WRI1     <------NtERF2                 --------->DEAR3(1)                   <---------ANAC46    <---------ATERF1(1)          ------>NtERF2                          <---------ANAC58    ------>NtERF2                --------->LBD16                   <---------ANAC46    <---------RAP2.3(1)         --------->DEAR3(1)                 <---------ANAC58 ---------MYB46(3)              --------->ANAC46                   <---------ANAC58         <------MYB83 -----GAMYB                   ------>ZmHOX2a(1)                   <------NtERF2             <------MYB46(1) ------MYB46(3)               <---------ATERF1(1)                <---------MYB46(3)     <---------ZAT2 ---->ALFIN1         <---------ARR11(3)                --------->ARR11(3)              --------->ARR11(3) -----AtMYB61        --------->ARR11(3)    --------->GLK1(2)<---------At5g28300        <---------ARR11(3) --ARR14(2)         --------->YAB1<---------LBD16--------->YAB1  ------>NtERF2 --------->MYB46(3) ->ARR14(2)       <---------WOX13(1)--------->LBD16    <---------ARR11(3)   ----------->HVH21   ggttgtcgccgacgaggttgaatgatcatctcctccgccggagagagtctgtgataagttcttacggtggcttgccttgtgaccaccgagagcttggtaa  9648700                                                           --------->ALFIN1                                                          <------ZmHOX2a(1)                                                        --------->ALFIN1                                                       <------ZmHOX2a(1)                                                  --------->DEAR3(1)                                                 <---------LBD16                                                --------->ABI4(1)             <---------ANAC58                                                ------>NtERF2            <---------MYB46(3)                        <---------ALFIN1       <---------ALFIN1        <-------GAMYB                        --------->REM1(1)      --------->DEAR3(1)     <---------MYB46(3)                       --------->ZAT14         --------->DREB2C(2) --------->MYB52(1)                       <---------ZAT14         ------->GAMYB --------->ATERF1(1)                   --------->ANAC58           --------->MYB46(3)   ------------>AtMYB77                   --------->ANAC58           --------->DEAR3(2)<---------At4g35610                   --------->ANAC46          <---------ATERF1(1)--------->At4g35610                --------->DEAR3(1)          <---------ALFIN1 <------ZmHOX2a(1)<---------ANAC58      -           <-----------HVH21    <---------At4g35610 <------NtERF2 ----------->HVH21                --          <-----------RAV1(1)   --------->At4g35610--------->LBD16----------->TGA1            -------   gaagagaacgtcttgtcgcagacgctacacttgtagctcaacttctccaccgccggaggaggaggaggctgacggttgtcgcgagcgagaagcatgaggc  9648800                                               ------>ZmHOX2a(2)                                             <---------AGP1                                             --------->ARR11(3)                                             --------->ARR14(2)                                             <---------ARR14(2)                                             <---------ARR11(3)                                       <---------GLK1(1)                 =====================================HOX2a_HOX2a       --------->ARR14(2)       <---------AtMYB61       <---------GLK1(2)        --------->ALFIN1       <---------ARR14(2)    <---------AtMYB61<------ZmHOX2a(2)    -------->P       <---------ARR11(3) <---------ARR14(2)<---------CCA1(2)   <---------ANAC58 <---------ZAT14     ----------->ARR10 <---------TOE2(3)    <---------ARR14(1)------>ZmHOX2a(2)  <---------ZAT18 -------->DAG2   ====================================HOX2a_HOX2a<---------ANAC58 --------->ZAT14 -------->DOF2   ------>ZmHOX2a(1) <---------ANAC46  ------>ZmHOX2a(2)      <---------ZAT14 ---->GT1       --------->TOE2(3)<---------MYB46(3)<---------ARR11(3)  <----------DOF2      ---------   aaaaagctagatactcttcctcagtgaggttttggtggtggaaatcggatcttgatctcttagatcgcttaccctttgtccagtgctcgactccatggaa  9648900       <---------HSFC1(2)                                                                   <--------       <---------HSFB2a(1)                                                               --------->GLK1(1)       --------->HSFB2a(1)                                                               <---------GLK1(1)       --------->HSFC1(2)                                                       --------->GLK1(2)      <---------ARR11(3)                                        ----------->RAV1(1)  <---------TOE2(3)      --------->ARR14(2)                                       <xxxxxxxxxxxxxxxxxsmallRNA(se3)      <---------ARR14(2)              --------->GLK1(2)        --------->ANAC58--------->ARR11(3)      --------->GLK1(2) <---------ARR14(2)      --------->bZIP60(1)        ---------->DOF2  <--------      --------->ARR11(3)--------->ARR14(2)      <---------REM1(1)      <---------TOE2(3)<---------ARR14(2)     <---------GLK1(2) <------ZmHOX2a(1)        <---------bZIP60(1) <---------MYB52(1) <------ZmHOX2a(1) >AtLEC2        ---------->DOF2  --------->GLK1(2)             --------->ANAC58<---------GLK1(2)<----   gactgaagaatcttcgaacaaaggaggaatcggagaagctaatcttggtgatgtaagagcctcgagcgccattaagttaaagattctgaggatttcttgt  9649000                                                                                                    -                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                       --------->AHL20(1)                                <---------ZAT14                                        --------->ARR11(3)                      <---------ANAC46           --------->AHL20(2)                   <-----------TBP                      <---------ANAC58       ----------->GT1                    ----------->GT1  ----                      <---------ANAC58   --------->ARR11(3)  >>>>>>>>>TBF1    <---------ANAC46   ---- -ANAC58           <--------P   --------->ZAT14  <---------AHL20(2)         --------->ALFIN1    <---- -ANAC58        <---------TOE1(3)    --------->ZAT14        *TSS        ---------->DOF2<---------AHL20(1) -----CCA1(2)   <---------TOE2(3)    <---------ZAT14<---------WOX13(1)<---------YAB1  --------->AHL20(2)   ctctcgagttttagtttgaaggttgcttgtgaattgcagtgaagaaattgtttaattgctgaagaagaagtaatgaaagtgtgtgtaaatatatagtagt  9649100                                     <------ZmHOX2a(1)       --------->ALFIN1             <------MYB83     --------->ALFIN1               <------MYB46(1)   <---------ANAC46               <--------P   <---------ANAC58            --------->ALFIN1   <---------ANAC58     ----------->HVH21 -------->ALFIN1      <---------AtLEC2 ----MYB46(1)         <---------ANAC58                     <------NtERF2<-----------GT1 ----MYB83            <---------ANAC58                   --------->ALFIN1 ----->MYB111(1)      <---------ANAC55(1)                <---------DEAR3(1)                     ----- ----->MYB46(2)       --------->ANAC55(2)    <---------ZAT14<---------ANAC46                 <------- ----->MYB111(2)      <---------ANAC55(2)    --------->REM1(2)       <---------ICU4  <---------HSFB2a(2) ----P<---------ZAT14 <---------ANAC46---------->DOF2 <---------AtMYB61--------->ICU4--------->HSFB2a(2)   aggtggagtgtggagaaggaagttgcgtgacaagtggtaggaaagtgtgaagagtgaaggtggcgattagataattactatatttttctaaaactctttt  9649200                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                               <<<<<<<<<<MYB80 ------                                                                           <---------MYB52(1)  <-----                                                                          ------->MYC3         <-----                                                                          <-------MYC3        <------                                                                          <-------MYC2        -------                                                                         --------->ANAC58     -------                                                                      --------->ZAT18         =======                                                               <---------ICU4 <------MYB46(1) <------                                                              --------->AHL20(2)        --------->TOE2(1)                                                              <---------ATHB51<------MYB83 <---------ZAT18                                                         <------ZmHOX2a(1)------->MYC2  --------->TOE1(1)      ------>NtERF2                                     ----------->GT1  --------->ANAC58  <---------ZAT14     --------->LBD16             <---------ARR11(3)    ----------->GT1<---------ZAT18-------->ZAP1---   <---------LBD16         --------->GLK1(2)<---------ANAC46  --------->ICU4 <---------AtMYB61------- ---->AHL20(2)      <---------YAB1         <---------LBD16    <---------AHL20(2)   <---------WRKY18(1) ---DOF2  ---------->DOF2  --------->ARR11(3)    ---------->DOF2  <---------ICU4  ----------->HVH21   taatatgcggaccaaagttgtgatgaaagtatctagatgtttttttgggggtaaagagaggaaaataattagggcacgtttggtttgacctagtacacgt  9649300     --------->ZAT18 ---->ALFIN1 --MYC2 ->MYC3 ->MYC2                                                                                         <---- ->MYC4                                           <----------DOF2                               <---- --MYC4                                      --------->YAB1                             <---------DAG2 --MYC3            <------MYB83           <----------DOF2                              <------NtERF2 ---TGA1a          ----------->GT1      <------NtERF2                                 <---------RAP2.6(3) -->TGA1a          <------MYB46(1)     <---------DEAR3(2)                             ------>NtERF2 -->ANAC55(2)    <--------P           <---------RAP2.6(2)                            --------->RAP2.6(2) =========================MYC_MYB     <---------DEAR3(1)             <---------ZAT14 --------->DEAR3(1) ---O2         --------->ALFIN1      --------->RAP2.6(3)             --------->ZAT14--------->RAP2.3(1) ------>ALFIN1 <---------ANAC46      <---------ORA47(1)   <---------ICU4            --------->ATERF1(1) -->O2      --------->ALFIN1        <-----------HVH21  --------->TOE2(3)       --------->ICU4   -----   gtgtgtgtgtgcaagtggtgttggtaaaatgaagaagaggtcggctataagacttttccttcattacttagtttactagtactgatgccgccttacaaaa  9649400                                     <------MYB46(1)                            <-----------HVH21           <-----------RAV1(1)       <------MYB83        --------->GLK1(2)<-------GAMYB                 ------->MYC3 -----AHL20(1)          <---------MYB46(3)             <-------MYC3    <---------TOE2(3)        ----- -----ARR11(3)          --------->MYB52(2)            --------->ANAC46 <---------YAB1 --------->YAB1 ---->AHL20(1)<---------MYB46(3)    --------------->AtSPL8         <----------DOF2 ----------->GT1   tattctagagtttctgtggtttctggtcgttgtcatggatggtactcgtatggtacacgtttcggtttactttaagatagatagatagttataacttata  9649500                                                    --------->ATHB12        --------->At4g35610                 --------->MYB46(3)    -------->P                             -------->P                       --------->ARR11(3)   --------->MYB52(1)                     --------->MYB52(1)                <---------ARR11(3)  ------->GAMYB   ---------->DOF2       --------->MYB46(3)                 --------->CCA1(1) --------->MYB46(3)                     <---------MYB111(1)  --------->ANAC58             <------ZmHOX2a(2) <---------MYB52(2)       ---------->DOF2------->GAMYB       --------->ANAC58            --------->ARR11(3) <---------MYB111(1)  ---------->DOF2   <---------MYB52(2) ---------->DOF2 --------->RVE1(1) ---->YAB1   <---------------AGL15 --------->YAB1--------->YAB1     <---------LBD16      <---------ARR11(3)   acaactaaccagttgacaaaaaaagaaagaaagtctataacaactaaccaatattgatttggaaagcatcttcggaaatatctatctacaagatcaattc  9649600  Previous    Next  AGI:  At1g27730.1    Description:  STZ (SALT TOLERANCE ZINC FINGER); nucleic acid binding / transcription factor/ zinc ion binding. similar to C2H2 (ZINC FINGER OF ARABIDOPSIS THALIANA 6), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G04340.1); similar to C2H2 zinc finger protein [Brassica carinata] (GB:ABI74691.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 9648128    to: 9649060    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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