Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->ATHB12          <---------ICU4         <---------YAB1         --------->ICU4       --------->YAB1      <---------AHL20(2)  <---------AHL20(2)  --------->AHL20(2) -------->AHL20(2) ---------AHL20(2) ------>AHL20(2) -------AHL20(2) ---->AHL20(2)        <-----------GT1 -----AHL20(2) <---------TOE2(3)                      --------->ANAC58 -->AHL20(2)  <-----------GT1                         --------->ANAC46 ---AHL20(2)<---------WOX13(1)            --------->YAB1       <----------DOF2 >AHL20(2)-------->HAHB4         <---------YAB1       --------->ANAC58         <---------AtMYB61 -AHL20(2)--------->YAB1    <----------DOF2     --------->AHL20(1) <-----------GT1        -----------   atatatatataatgattaacatattatcaacttttatgaaaaaatcaaaacatattaagcaactccttttaactcgttgttgtggtcacaaactgtaaca  9636200                          <<<<<<<<<AtLHY                         <---------YAB1                          <<<<<<<<<AtCCA1          ---------->DOF2  ------->TEIL            ---------                 --------->ALFIN1            XXXXXXXXXXXXXXXXXXXXX>MIR2936         <---------YAB1 >GT1     <-----------------AGL1      ---------->DOF2   <----------ID1         <---------ANAC46  <---   agttttcttcttatccaatgtggaacgagttagcccaaaaaaaagacttgagagaaagaagacaaatatgaatgttttatgtcttataaatggaatgtaa  9636300                                                      <---------ARR11(3)                                                      --------->ARR11(3)                                                    <---------AHL20(2)              --------->YAB1                                                   <---------AHL20(2)              --------->ICU4                                                   --------->AHL20(2)       <---------ANAC46                                                --------->ATHB51            <---------AtLEC2                                                <--------HAHB4              <---------ANAC58                                                <---------ICU4              <---------ANAC58<--------                                               <---------YAB1     --------->ARR14(2)<---------ICU4                                             --------->YAB1       <---------ARR14(2)-------->HAHB4 -->GT1  ----------->GT1 --------->AHL20(2) <---------YAB1       <---------GLK1(2) <---------ATHB51 --------GT1  --------->AHL20(2)<---------YAB1 --------->ICU4  --------->LBD16   --------->YAB1   aaccatttcaatagaaaaaaataacaaaaaaattcttataccaattttcataattaaatcttatcccgaatcccatttgcctgtaataatgagactttta  9636400                                                                                                <----                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                            <---------------AGL15                                                                            --------------->AGL15                                                                           ----------------->AGL3                           <---------ICU4                                  ----------------->AG -----                           --------->ATHB51                                ----------------->AGL2<---                        --------->YAB1           --------->AHL20(2)   --------->YAB1        ---------          <---------HSFB2a(2)              ----------->GT1           <---------AHL20(2)     ---------          <---------HSFC1(1)              <---------HSFB2a(2)  --------->TOE2(3)          --------->YAB1    <---------YAB1     <-------TEIL       --------->HSFB2a(2)  --------->TOE1(3)      ---------->DOF2 --DOF2   --------->HSFB2a(2)            <---------ETT(2)   <-----------GT1----------------->AGL1----   aaagtttttattcgagaagcagtgattcataatttcaacgatgtcgagaaaaaaaatgtgtataaccctaaataatagccaaaataagaaaagaataatt  9636500     ---------->DOF2   <---------HSFB2a(2) -----AHL20(2)                                                            --------->ANAC58 -HAHB4                                                          ------>MYB46(1) --ICU4                                           --------->AHL20(2)      --------->ANAC58 ->ATHB51                             <---------AHL20(2)      <---------HSFB2a(1) ->YAB1                               --------->AHL20(2)      --------->HSFC1(2) ---->AHL20(2)                 <---------TOE2(3)  <---------AHL20(2)      --------->ANAC46 ------AHL20(2)               <-----------GT1     --------->YAB1 ------>MYB83 >ICU4               --------->DAG2  <---------AHL20(2)       <---------HSFC1(2) >AHL20(2)   ----------->GT1  --------->MYB52(1)<-----------TBP--------->AtMYB61<---------ICU4 ----->AHL20(2)     ---------->DOF2  --------->AHL20(2)       --------->HSFB2a(1)*TSS     <----------DOF2   aaattccaaaagaaatggttaaaaaagcgaattaacgaattaaattcgacatttatattttgcaaccttcccttcgacgcaaacatttctctcttttttc  9636600           --------->TOE2(2)           --------->TOE1(2)          ----------->RAV1(2)        ------>MYB83        ------>MYB46(1)      <---------MYB46(2)                                                         <---------ANAC46      --------->AtMYB61                                                          <---------ANAC58      --------->MYB46(3)                <---------ALFIN1                         <---------ANAC58   <-----------GT1                   --------->MYB46(3)                       --------->ANAC58  <---------ATHB12          --------->ANAC46          <<<<<<<<<TBF1           --------->ANAC58  --------->MYB46(3)        --------->ZAT6         <<<<<<<<<TBF1 <---------TOE2(3)      <---------HSFB2a(2)   tctaatcaccaaacctgcgtcttctctctcacactactaacaacacttccttcttcttcttccgactatggataagaagcacggcttgttctccaagtct  9636700                                                                          --------->bZIP60(1)                                                                          --------->bZIP60(2)                                                                          <---------bZIP60(1)                                                                          <---------TGA2(1)                                                                          --------->ANAC46                                                                          <---------ANAC58                                                                          <---------O2                                                                          --------->O2                                                                          --------->TGA1a                                                                          --------->TGA2(1)                                                                          --------->ANAC58                                                                          --------->ANAC55(2)                                                                      <-------GAMYB                                                                      <---------RAP2.6(3)                                                                      ==============MYC_MYB                                                                     <---------MYB46(3)                                                                  ==================MYC_MYB                                                                  ------------>MYB.PH3(1)                                                                 --------->DAG2                                                                ---------->DOF2                                                                ====================bZIP_DOF                                                               =====================bZIP_DOF                                                               ---------->DOF2          --------->SPL7                                                            --------->LBD16             <---------ARR14(2)               <------ZmHOX2a(2)                           <---------LBD16<---------ANAC55(2)   <----              --------->ARR14(2)                           <------NtERF2  --------->ANAC58--------->ATERF1(2)       <---------ATERF1(1)           <---------CCA1(2)    <---------ATERF1(1)         ----------->HVH21       ------>NtERF2               <---------ANAC58       ------>NtERF2<---------MYB52(1)--------->DEAR3(2)      <---------ETT(2)             <---------ANAC58      <---------DEAR3(1)    --------->ANAC58 -----      ----------->HVH21           --------->HSFC1(2)     --------->DEAR3(1)    --------->ANAC58 <----      --------->DEAR3(1)          <---------HSFC1(2)    --------->ATERF1(1)<-----------HVH21    -----     <------NtERF2             <---------At4g35610     <---------ATERF1(1)===================MYC_MYB    --------->LBD16            --------->At4g35610     <-----------HVH21  <---------ANAC58<---------ATERF1(2)    ------>NtERF2          <-----------HVH21          --------->ANAC46<-----------HVH21 --------->ARR14(2)    <---------ATERF1(1) --------->ZAT14          <---------YAB1--------->ARR14(2)    ------->GAMYB   --------->LBD16      <---------ZAT18        --------->YAB1--------->LBD16   --------->ANAC46 <----   <---------LBD16      --------->ZAT18       <---------ATHB12<------NtERF2<-----------TGA1  <-------  <---------LBD16       <---------ZAT14       <------ZmHOX2a(2)<---------ARR14(2)  --------->MYB52(1)   aattcccggcgaccacgatccaagagtccagtcagaagcgtctctccgatcatcatccgtcgccggaaaggccgttacgtcacacaaccggaccggcaca  9636800                                    --------->HSFB2a(2)                                    <---------HSFB2a(2)          <---------MYB46(3)                           --------->ARR11(3)                   --------->ICU4                          --------->HSFC1(2)                    <---------YAB1    <---------At4g35610   --------->HSFB2a(1)                 ----------->GT1             <---------DEAR3(2) ---MYC3             --------->HSFB2a(2)                     <---------AtMYB61            <------MYB46(1) -->MYC2             <---------HSFB2a(2) --------->At4g35610 --------->ALFIN1         <---------O2 ---MYC4        --------->LBD16    ------>ZmHOX2a(2) --------->LBD16                  <---------TGA1a -->MYC3<---------ANAC58  <---------HSFC1(2)        --------->HSFB2a(2)         <---------HSFB2a(2) ---MYC2<---------ANAC58  <---------HSFB2a(1)       <---------HSFB2a(2)         --------->HSFB2a(2) --ALFIN1     <---------LBD16  ------>ZmHOX2a(1)   <---------LBD16            <-------TEIL<------MYB83   tgtctgagatgcttgctccggttatagaaggtcctgatccagacgctgaagactccggaagcagtggtgattactctaggttcgagagacgttggtacaa  9636900                              <---------RAP2.6(3)                              <-----------HVH21                              ------>NtERF2                              <-----------TGA1                             --------->RAP2.3(3)                             --------->RAP2.3(2)                             --------->DEAR3(1)                             --------->ATERF1(2)                             --------->TGA1a                             <---------ATERF1(2)                            --------->RRTF1(1)                            --------->RAP2.3(1)                            --------->ERF1                           ------>NtERF2                           --------->LBD16                           <---------ATERF1(1)                         <------NtERF2                         --------->ATERF1(1)                        <---------RAP2.3(1)                        <---------ATERF1(1)                       <---------ARR14(2)                       --------->ARR14(2)                          ------>ZmHOX2a(2)                       <---------PCF2                              ====================HOX2a_HOX2a                      --------->ATERF1(1)                         <---------At4g35610                      <------NtERF2                               =====================HOX2a_HOX2a                     <---------MYB46(3)                           --------->At4g35610                     --------->ABI4(2)                            <------ZmHOX2a(2)                     <---------ATERF1(1)                         --------->GLK1(2)                     ------>NtERF2                               ------->TEIL                    <---------DEAR3(1)                           <---------ARR14(2)                    --------->ALFIN1                             --------->ARR14(2)                   <---------MYB52(1)      ===============================HOX2a_HOX2a               <                  --------->LBD16          ------>ZmHOX2a(1)     <-----------ARR10              -----                <---------LBD16     <---------ARR14(2)      --------->MYB52(1)                 <-----               --------->MYB52(1)   --------->ARR14(2)    <---------MYB52(2)                  <------            <---------At4g35610<------NtERF2              --------->MYB46(3)                  -------            --------->ZAT2--------->DEAR3(1)       <---------GLK1(1)                         <-------            <---------ZAT2<---------ALFIN1 ==============================HOX2a_HOX2a         <-------            --------->At4g35610<---------MYB52(1)  --------->GLK1(1)             <---------DEAR3(1)<-        <-----------HVH21--------->RAP2.3(1)  <---------LBD16    <---------AGP1 ------>ZmHOX2a(1) <--   ttggatgaaatgtcagcttccggtggctccgccgtcagtatcgtcctcttcggatttcaaacgaacggatctgaggcttctcctcggtgttcttggcgca  9637000                             <---------GLK1(1)                             --------->GLK1(1)                            <---------ARR14(2)                     --------->ZAT18                     <---------ZAT18                --------->DOF5.7(2)      --------->TGA1a                <---------MYB52(1)       --------->ANAC46        ------>ZmHOX2a(1)   <---------AGP1--------->TOE2(3)  --------->MYB59    <---------ZAT14   --------->ANAC46 ---------MYB52(1)<---------DOF5.7(2)  <---------ALFIN1 -->TEIL=============================HOX2a_HOX2a ----ALFIN1   --------->ANAC58       <---------ALFIN1 ---ZAT18     --------->ANAC58    ------>ZmHOX2a(1)                                 --------->ZAT14 -->ZAT18  --------->ZAT14  --------->ARR11(3)                                   <---------At5g28300 --ANAC58  <---------ZAT18  <---------ARR11(3)                                  <-----------GT1 --ANAC58  <---------ZAT14  --------->ARR14(2)                        <---------At4g35610 ---------DOF2--------->ANAC46------>ZmHOX2a(2)                       --------->At4g35610    ------>ZmHOX2a(1) -------DAG2 ------->TEIL  <---------CCA1(2)                        <---------ZAT18<-----------RAV1(1)   cctttaggtcctgtgcacgttagcgctctggatctccttccacacctcagtatcaagaatacacctatggtgagctcttaattcactgttgtctcctcaa  9637100  Previous    Next  AGI:  At1g27690.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G19540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70870.1); contains InterPro domain Protein of unknown function DUF620 (InterPro:IPR006873) Range:  from: 9636581    to: 9638564    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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