Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->At4g35610    --------->YAB1 <---------At4g35610 <----------DOF2 --------->YAB1 ---------ANAC58 <---------ICU4 ---------ANAC58<---------ATHB12 ----ICU4     <-----------GT1 --->YAB1   <---------AHL20(2)                                      --------->TOE2(3) ---ATHB12  --------->AHL20(2)                                     --------->REM1(1)     --------->AHL20(2) -->ICU4   --------->YAB1                                         <-------TEIL       --------->YAB1 >YAB1   ------->TEIL                                       ---------->DOF2        <---------ARR11(3)   tggctttcatgaattttaatcatctccctctaattgcagagagagagagagagagagggcctaaaagctacattagataatacaaaatcatatatataca  9621200                                                                      <-------TEIL                                                                     <-----------GT1                         <---------ARR14(2)                      --------->AHL20(2)                <-                         --------->ARR14(2)                   --------->YAB1                ---------                        <----------TaMYB80               <---------ICU4                     <--------                       ---------->TaMYB80                <--------HAHB4                    --------->AHL20(2)              --------->DAG2   --------->HSFB2a(2)       --------->ATHB12               <---------AHL20(2)             ---------->DOF2   <---------HSFB2a(2)       --------->YAB1                 --------->AHL20(2)  ----------->GT1--------->ALFIN1 ---------->DOF2      --------->GLK1(2)               --------->AHL20(2)   aatactgaaaaatagaaaagtagggcatatactctagaaagcgagtccatgagagagaatcatttcataatatacattacaaatatagatttatttaatt  9621300                                                                --------------->AtSPL8        --------->ATHB51                                <-----------GT1        -------->ATHB1        <----------DOF2       <----------DOF2   <---------------AGL15        --------->ATHB12  <---------ALFIN1         <---------ANAC58   --------------->AGL15       <---------YAB1 <-----------GT1        <---------AHL20(2) <---------------AtSPL8 --------YAB1        <-----------GT1    <---------TOE1(3)--------------->AGL15 >AHL20(2)      --------->ATHB12        <---------TOE2(3)=============================MADS_MADS -AHL20(2)    <---------WOX13(1)  <----------DOF2  <---------ANAC58 <-------TEIL   tgttattgtattattgaatgatttttcccctcctttcttttgaaggttttattgcttttcacaatataggtacttgaaatagtagagagagagagagaga  9621400                      --------->ANAC58                      --------->ANAC58                  <-----------HVH21                   <---------bZIP60(2)                 <---------ANAC58                     <---------ANAC46                  --------->ZAT18                 <---------ANAC46     <---------TOE2(3)         ---------->DOF2         <---------ZAT18                 <---------ANAC58     <---------TOE1(3)    <----------DOF2              <---------ZAT14                <-------TEIL    --------->DAG2   --------->ANAC55(2)             <---------YAB1             --------->CCA1(2) ---------->DOF2   <---------ANAC55(2)           --------->CCA1(2)   gagagagagagagagagatgcgtcaagcttcaaaaaagctaaggtaatgttatgtgatgtgcttttgaaaggaatagagagctatgagagagcacatata  9621500                   <-----------GT1                <---------ICU4                                               <----------DOF2               <---------AHL20(2)                                       <---------ICU4          -----               --------->AHL20(2)                                      <---------YAB1           -----           <---------AHL20(2)                                        <---------ICU4             -----           <---------YAB1    --------->TOE2(3)                       --------->YAB1       <----------DOF2    ------------>CBF   --------->ANAC46                  *TSS     --------->YAB1      <----------DOF2   tacaacaacaatttttattaattacacttcatcttaatctcttgggatttgtaagagaaactcttcaaaaatcatcattctttttcatctttctttacac  9621600                                            <---------ICU4                                            <---------AHL20(2)                                           --------->AHL20(2)                                    ----------->GT1                                  <-----------RAV1(2)                                 <------ZmHOX2a(2)                                --------->ARR11(3)         <-------TEIL          --------->GLK1(1) ---->ANAC58                   <---------GLK1(1)                                             <------- ---->ANAC58          <---------AHL20(2) --------->YAB1--------->AHL20(2)         <---------ARR14(2) ---->ANAC46         --------->AHL20(2) <---------YAB1 <---------AHL20(2)         --------->ARR14(2)   acaaacacacatacacacacatatataatacagagatcaggtataataaatacttatatatatagcatcatcaactctcatacatatatggactctgcta  9621700                      <---------At5g28300                                                      <-----                  --------->WOX13(1)                                                           ------                <------ZmHOX2a(2)                                                              ------               --------->ARR11(3)                                                            --------       <---------At4g35610                              ------>ZmHOX2a(1)                   <-------TEIL       --------->At4g35610       <---------PCF2        --------->TOE2(3)                 --------->At4g35610 --At4g35610   <---------ARR11(3)<---------ANAC46 <<<<<<<<<TBF1       ----------->HVH21  <---------At4g35610   atctccatcagcttcaagatcaattacagcttgtggggtcttcttcatcttcttcttccttagacaataactctgacccttcttgctatggagcttcatc  9621800                                           --------->ANAC58                <-----------GT1                           <----------DOF2 --------->ANAC46            <---------AHL20(2)   <---------ATHB12        --------------------->WRI1                 <---------AHL20(1)           <- ----At4g35610      ----------------------->TaNAC69(2)             --------->YAB1       ------->TEIL ----->RAV1(2)   <------ZmHOX2a(1)         --------->ANAC58      ------->TEIL          <---------CCA1(2) --->At4g35610<---------LBD16           ------>ZmHOX2a(1)------>ZmHOX2a(1) <---------AHL20(2) ------- ->REM1(1)    <-----------RAV1(2)   <-----------GT1      <---------At4g35610 <---------AtLEC2 -------   tgcccatcaatggagcccaggaggtatttctttgtaagtttcctcactcaatctctctcctctgatgtatcatatatttacatggccatgtatctattat  9621900              ------->MYC3              <-------MYC3              ------->MYC2              <-------MYC4              <-------MYC2              ------->MYC4           --------->At4g35610             --------->ANAC55(2)     <---------At4g35610             <---------ANAC55(2)  <---------At4g35610       <---------YAB1             <---------TGA1a      --------->LBD16          --------->KAN4(2)             --------->O2        --------->ANAC46         <---------KAN4(1)                   <------   <-------TEIL                 <---------LBD16           --------->HSFB2a(1)                 ------- ------TEIL  <---------O2     --------->ARR14(2)          --------->KAN4(1)                 <-------- -->AHL20(2) --------->TGA1a <---------GLK1(1)            <---------HSFB2a(1)         --------->GLK1(2) -->YAB1 <-----------GT1  <---------TOE1(2)              <---------KAN4(2)    --------->CCA1(2)    <-   atacatccatttaacacgtgtatgctactaggtttccgcagctatatgtgtgtgtttagaatattcttggtatcaagatgatatgaagaatttggaatct  9622000                                                                                         <---------AHL20(2)                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                                     -------->ATHB1                                                                                     <---------ICU4            ---------->ID1                                                          --------->ICU4           <------------------------ANAC81                                          --------->AHL20(2)      <----------DOF2                                                               <---------ATHB51 <<<<<<<<<TBF1                                                                      <---------AHL20(2) ---HSFB2a(1)                                                                    <---------AHL20(2) -->HSFB2a(1)     <----------DOF2                                                --------->AHL20(2) -GLK1(2)  <-----------GT1                                                  <---------ANAC46 -----------------------ANAC81                        <----------ID1 <---------AHL20(2)<---------YAB1   ttcttcttctttttttccttcttttttggtttttgaaagataagttagtgaagaagacaacaagatagaatttaagtggctgataaattattaaatgtct  9622100  Previous    Next  AGI:  At1g27660.1    Description:  ethylene-responsive protein -related. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G61660.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61992.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 9621557    to: 9625991    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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