Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->MYB52(1)  <------NtERF2                                                                    --------->MYB46(3)  --------->ANAC46                                                                    <---------MYB52(2) ------>ZmHOX2a(1)                                                                  --------->ANAC46     <---------LBD16                                                                 --------->MYB46(3)  ================                                                               ------>MYB83          ------>ZmHOX2a(2)                                                               -------->P           <------ZmHOX2a(2)                                                               ------>MYB46(1)      =================                                                             --------->DEAR3(1)    --------->AGP1                <-------TEIL                                 <---------MYB46(2)    <---------ARR11(3)             <---------ANAC58   --------->ANAC58            --------->ATERF1(1)    <---------ARR14(2)             <---------ANAC46   --------->ANAC46            <------NtERF2          --------->ARR14(2)    <---------YAB1              --------->ANAC58           ------>NtERF2           <---------GLK1(2)  --------->ATHB12              <---------ALFIN1         ---------->ID1            --------->ARR11(3) <---------YAB1<---------MYB52(1)                       <-----------HVH21         <---------At4g35610 ----DOF2    <---------ANAC58 ----------->RAV1(1)      <-----------RAV1(1)       ----------->ARR10  <   tatatgattagtattccgttcatttcaaaatgccacacaacaacgtagtcttccttcttgtcgcctacccacaaacggcctctcagatcctcggcagtat  9568900              ---------->DOF2        --------->ANAC58        --------->ANAC58        --------->O2        --------->ANAC46                                                                       <-----      <---------ALFIN1                                                                        <------   --------->PCF2                       <---------DAG2                                  <---------YAB1   --------->ATERF1(1)                  <----------DOF2                              <---------ATHB12 --------->ARR14(2)          <---------ARR11(3)                               <---------DAG2  ------- <---------ARR14(2)          --------->ARR11(3)                  <---------------AGL15<--------ATHB1 ======HOX2a_HOX2a           <---------AHL20(1)                <---------ATHB12<----------DOF2<------ ======HOX2a_HOX2a        --------->AHL20(2)        ------>ZmHOX2a(1)---------->DOF2 --------->ICU4 ------ZmHOX2a(1)       <---------WOX13(1)     ------>ZmHOX2a(1)<-----------------AGL3--------->YAB1   gaggagccccacgcgataaatcgctgattaatatatccctgactttatcctctcctactcgctcaatctttaaaaggctacctttcaatgattctagtgg  9569000                                                                --------->LBD16                                                               <---------HSFB2a(2)        <------ZmHOX2a(2)                                      --------->HSFB2a(2)       <---------ARR14(2)                             --------->ARR14(2)       --------->ARR14(2)                             <---------ARR14(2)    ===================HOX2a_HOX2a                    ------->TEIL                      --------->ANAC58    <------ZmHOX2a(2)                                 --------->GLK1(2)                 --------->ANAC46    ==============HOX2a_HOX2a                         <---------ARR11(1)         <---------At4g35610   --------->ARR11(3)                                 <-----------ARR10          --------->ZAT2   <---------ARR11(3)                                <---------ARR14(1)          --------->At4g35610 ----MYB46(3)        ---------->DOF2              <---------HSFB2a(2)       <---------ANAC55(2) ---ZAT6===============HOX2a_HOX2a          <-------TEIL   --------->REM1(1)----------->RAV1(2) -->ALFIN1      ------>ZmHOX2a(1)--------->YAB1   --------->HSFB2a(2)     <-----------GT1           - ---AtMYB61------>ZmHOX2a(1)     --------->AHL20(2)  <---------CCA1(2) <---------ICU4   --------->ANAC58   tggaagatcgatcctctcctcgctaaagacatctataatatagagtttcattcgcgaatctacatccagaaactaattacctgagcttccaaggaatcga  9569100                                                                  --------->ANAC58    ------>ZmHOX2a(1)                                                             <------MYB83             ===============                                                           <--------P                 ===============                                                --------->YAB1    --------->ANAC46    <----------DOF2                                               <---------ATHB12   --------->ANAC58 ------>MYB83           ---------->DOF2          <---------ANAC46 <---------MYB52(1)            ------>MYB46(1)    <---------CCA1(2)  --------->ZAT18         <---------YAB1<------MYB46(1)     ------->GAMYB  <---- -------->TOE2(3)   --------->DAG2  <---------ANAC55(2)   <-------GAMYB         --------->MYB46(3)   tacctcatacctccaaagtcgaaaggtcactattcgtctcgtaaaccctatcatcgtttgggttggacacactactgcgataaccatccttttctgcata  9569200                           ---------->ID1                         <-----------RAV1(1)                  --------->LBD16                 <---------RAP2.6(2)                <---------LBD16                ------>ZmHOX2a(2)               --------->CCA1(2)               --------->ARR14(1)               <------ZmHOX2a(2)              --------->ARR11(3)              <---------ARR14(2)              --------->ARR14(2)              --------->AGP1              --------->ARR11(1)              <---------ARR14(3)              <---------ARR11(3)              --------->ARR14(3)              --------->ANAC58        --------->GLK1(2)             <---------GLK1(1)                --------->ANAC58       <---------ARR14(2)          ----             --------->GLK1(1)             <---------SPL7            <---------GLK1(2)         ------  --------->At4g35610<----------DOF2 ---------->DOF2                 --------->ARR14(2)        ------ =====================HOX2a_HOX2a   --------->YAB1                  <------ZmHOX2a(1)          ------ ======================HOX2a_HOX2a <---------ATHB12              <-----------RAV1(2)      <---------ANAC46 ---TEIL    ----------->ARR10    --------->WOX13(1)       --------->ZAT14              <---------MYB52(1)   catcatcagcaatggagatccggcttcttgtcgctcaatcaaagtcgaacgcatggccattgcagactcaggattctgacaactccatcgttgtttgaac  9569300      ------>ZmHOX2a(2)     <------ZmHOX2a(2)                                                                   --------->MYB46(3)     <<<<<<<<<GATA-1                                                                   --------->MYB52(1)     <<<<<<<<<GATA-4                                                                   --------->YAB1     <<<<<<<<<GATA-2                                                              ----------------->AGL2     <---------GLK1(1)                                                         ------>MYB83     <<<<<<<<<GATA-3                                                           --------->ANAC58    <---------AGP1                                                             ------>MYB46(1)    <---------ARR11(3)             <------------CBF                            --------->ANAC58    --------->ARR11(3)            --------->ATHB12                         --------->ANAC58   <---------CCA1(2)             <---------AHL20(2)                        --------->ANAC58 ----->TOE1(2)                   --------->AHL20(2)                        --------->ANAC46 --------->AtSPL3               <---------WOX13(1)            ----------->GT1------->GAMYB------->GAMYB --------->AtSPL8            <---------YAB1    <---------MYB52(1)  <-----------TBP------------>CBF ->TEIL                   <----------DOF2---------->DOF2      <---------ZAT6--------->MYB46(3)   gtactagatctctgcattttcaggtcgtcttttgattaattgagaaagcgttaagttgcacatactgttatatatacaaccaagcccaataacagccaga  9569400                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)                --------->ARR14(2)                                 <---------AHL20(2)                <---------ARR14(2)                           <-------GAMYB                       ----                <---------AGP1                              <---------MYB46(3)               <-------                ------->TEIL                              <-------GAMYB                      <-------           --------->MYB52(1)                             <---------ANAC58                   <-------  <---------AHL20(1)            <-----------GT1           <---------ANAC58              <----------DOF2  --------->AHL20(1)          --------->AHL20(2)         <------MYB46(1)       <---------LBD16 ------  --------->ARR11(3)     ------------>CBF                <------MYB83         <---------ANAC46 ------  <---------ARR11(3) ----------->HVH21        <------ZmHOX2a(2)    <-----------GT1     --------->TOE2(3)   gaaaaatattctataacggatctatgacccaatataacatcatcgtggatcatttcatttggttgttatttaacttatattcgtggaaacctttagcgtg  9569500                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)      --------->GLK1(1)                                     --------->ICU4 ------->HVH21                                         <-----------TBP --ANAC46                 <---------YAB1             <----------DOF2 --ANAC58             --------->ARR11(3)             --------------->AGL15                          < --ANAC58             <---------GLK1(2)           --------->ARR11(3)          ---------->DOF2       < ----->GT1    <----------DOF2     --------->TOE2(3) --------->YAB1       --------->ZAT14         <--- --->ALFIN1   <---------DAG2    <---------TOE2(3) <---------ARR11(3)     <---------ZAT14    ---------   tgaaactgatttcaaacttttttagattttgataaacgtttatgtgtgaaactatctttataaagattaaaatactgaagtaaagaagagggattagtga  9569600                                                  --------->ARR11(3)               --------->ARR14(1)                 <---------ARR14(2)              --------->ARR14(2)                  <---------ARR11(3)              <---------GLK1(2)                   --------->ARR14(2)              <---------ARR14(2)                  <---------GLK1(2)   <---------MYB46(3)                           ----------->ARR10             ------>MYB46(1) ---------ANAC58                        --------->CCA1(2)                <-----------GT1 ---------ANAC58       <---------ARR11(3)     ---------->DOF2        --------->TOE2(3) ------ARR14(2)--------->GLK1(2)     ----------->ARR10             --------->AHL20(2)          ------ -->GT1       <---------ARR11(3)     <---------TOE2(3)       <-----------GT1  ------>MYB83  ---------   attcgtggttattcaagattctcttgatattcttaagttgagatttggaaaagatactcatttgtacaattcattaaacctactgcctacaaatccataa  9569700                                       --------->TGA2(2)        --------->YAB1               --------->ANAC58       ----------->HVH21             --------->ANAC58   <---------ATHB12                  --------->ANAC46  --------->ANAC58                   <---------ANAC55(2)  --------->AtLEC2              --------->ZAT6                 <---------ICU4                       <  --------->ANAC46              <---------------AtSPL3    <---------WOX13(1)                       --  --------->ANAC58             <---------ZAT14         ----------->HVH21                           -- ---->DOF2               --------->CCA1(2)   <---------YAB1   <---------YAB1                     <--- >TOE2(3)           ---------->DOF2 --------->SPL7   ----------->RAV1(2)                       <-----   atccaagcaatgacaacgagggaaaagatagagaacagtacgtcagtatcatttcgcctgactgatcatttcagtctcaaatgtgagcctcttgttttca  9569800  Previous    Next  AGI:  At1g27550.1    Description:  F-box family protein. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G27580.1) Range:  from: 9568800    to: 9569317    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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