Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->GLK1(1)                                                                                   --------->At4g35610                                                    <---------LBD16                <---------GLK1(1)                                                    <-------TEIL                   --------->ZAT2                                                   --------->ARR14(1)         --------->ETT(2)                                                   --------->CCA1(2)       <------MYB46(1)                                                  --------->ARR14(2)       <---------MYB46(3)                                                  <---------ARR14(2)       <------MYB83 --------->LBD16                                                  --------->ARR11(1)      <---------AtMYB61                                                ----------->ARR10       <-------GAMYB <---------LBD16                                              <---------MYB52(1)       --------->MYB55(2)                                        --------->WRKY12               <---------MYB46(3)           <--------P                   --------->WRKY38(1)            <-----------RAV1(1)  <---------ZAT6                        --------->ETT(2)           <---------ANAC58<---------At4g35610 <---------TOE1(3)                   <---------ANAC58              <---------ANAC58<---------ZAT2 <-- <---------TOE2(3)                   <---------ANAC46 ----------->GT1  --------->MYB52(2)  <--------- -------DOF2<-------TEIL             <---------ANAC58 --------->LBD16<---------MYB52(1) ------>NtERF2   tttagggttacaggttgatatagaagaagcgaaggaatgtcgtagaccgatagatacggagaaatttgtgcgtttgttggtcgagagctccggctttaga  9558200                                                                                                 ----          ----------->HVH21                                                                     -----        --------->At4g35610                                                                     <----    <-----------RAV1(1)                                                           <------ZmHOX2a(1)    --------->HSFB2a(2)        <------ZmHOX2a(1)                         <------NtERF2          <----   <---------LBD16 ----------->GT1       --------->AHL20(2)             ------>NtERF2         ------- -------GLK1(2)  <------ZmHOX2a(1)      --------->ICU4                 --------->ETT(2)     <-------- -DOF2  <---------At4g35610  <---------TOE2(3)    <---------RAP2.6(3) ---------->ID1  --------->DOF5.7(2)   gaatttctggggctgaagaggatgtgaaattgaggaacagcgattatttggccgataagacatggttgagttgtcgccatcggaggacgttatcaccgga  9558300    <---------At5g28300  ----------->HVH21 ----->GLK1(2)                                                                --------->TOE2(3) ---->ARR14(2)                        --------->bZIP60(2)              <----------DOF2 -----GLK1(2)           <----------DOF2                             <-----------GT1 -----ARR14(2)     <----------DOF2<-----------GT1                  <-----------GT1 -->LBD16<---------ZAT2<---------ANAC58               *TSS    <------MYB83 <-----------GT1 -LBD16  --------->ZAT2<---------ANAC58     <------ZmHOX2a(1) <------MYB46(1) <----------DOF2       -   atctctcaccgtgctgagaggctttgctttagtttttgacacctcaggacatgtatggatggataggttttaacttttaactttagctagagatggttta  9558400                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                               <-----                                                                                               ------                                                                                    <---------DAG2---                                                                                    <----------DOF2 -                                                                                  <---------------AGL15                                                                                  --------------->AGL15                                                                                 ====================                                                                                 <-----------------AGL3                                                       <---------AHL20(2)        <-----------------AG       ----------->GT1                             --------->YAB1                <-----------------AGL1       <------MYB83 --------->AtLEC2              <---------YAB1                 <-----------GT1 ----       <------MYB46(1)                            <---------ATHB12             <-----------GT1-------      --------->MYB59                            <---------TOE1(2)        <---------MYB52(1)  ------- ----------->CBF------------>CBF                ------>ZmHOX2a(1)       --------->HSFB2a(2)   <------   agggcaatttggtaaaatagcaatgcaaaggctgagtttttcttattttcctatgattttttttttttttggttctggtattttcactttttgggaacca  9558500       <---------ARR11(3)       <---------AHL20(1)   --------->YAB1  <---------ATHB12 ------>MYB83 ------>MYB46(1) -------MYB55(2) -------ATHB12                    <---------At4g35610 -->MYB83 <----------DOF2     <-----------GT1 ----->ANAC58              --------->AHL20(1)                 <----------ID1 ---->P--------->ARR11(3)  <---------ARR11(3)           ============================================= -->MYB46(1)               <---------AHL20(1)           <---------------AGL15 ----MYB111(1)             <---------ICU4               ----------------->AG --->AtMYB61               --------->ARR11(3)           ----------------->AGL1 ------>MYB46(3)         <---------AHL20(1)            <-----------------AGL1 -------->WOX13(1)       <---------AHL20(2)      <---------MYB52(1)      <---------YAB1 =======================================================================MADS_MADS                 --- ----->ANAC58           --------->YAB1         <---------ANAC58        ----------->GT1       -------- -->MYB46(3)           <---------YAB1          <---------ANAC58----------->GT1 ---------->DOF2   ---- -->DEAR3(2)        <---------AHL20(2)      <----------DOF2---------->DOF2 <------------CBF  <------- ---MYB52(2)       --------->AHL20(2) <----------DOF2 <-----------GT1  --------->YAB1  <----------ID1   accaatcaatatcttttaaaattttataatattttctgctctttgactttcgttttttaccaaaagggcaaaatggtaattgaaagaagggaacaaatcc  9558600                                                <---------ARR14(2)                                               --------->ATERF1(1)                                               <------NtERF2                                              <---------ATERF1(1)                                              --------->LBD16                                             <---------ANAC46                                             <---------DEAR3(1)                                            ------>NtERF2                                            <------NtERF2                                            <---------LBD16                                            --------->ATERF1(1)                <---------bZIP60(2)        <---------ATERF1(1)          <---------ARR14(2)              <---------DEAR3(1)    <---------YAB1    <---------HSFB2a(2)                  <---------LBD16     --------->ICU4 =============MADS_MADS                 <---------TGA1a    <---------At4g35610 ------------>AGL15   *TSS              <---------O2     <------NtERF2                            <-- ->ARR14(2)    <---------TOE2(3)     ----------->HVH21  --------->LBD16                          <--- ----->LBD16 ----------->TGA1      <------ZmHOX2a(2)   <---------ANAC46  --------->AHL20(2)   ------>ZmHOX2a(1) --ARR14(2)  ----------->HVH21   <---------GLK1(1)    <---------LBD16 --------->YAB1     <----------DOF2   ccagttagagaagaactgacgttgttctaatcgagagatcagacgcggcggagactggcggagatgatgaattcataaattccttcttctcctttcctct  9558700                         <---------GLK1(2)                               <---------ANAC58                        <---------ZAT2                                   <---------ANAC58                        --------->At4g35610                          ------>ZmHOX2a(1)                 --------------------->WRI1                   <-----------ARR10             <---------ANAC58     <---------ICU4             <---------CCA1(2)         <---------WOX13(1)<-------TEIL<---------ANAC58      <------NtERF2   <---------ANAC58       --------->ATHB12 <---------At4g35610---------->ID1  <---------ANAC58  <---------ANAC58      <---------YAB1    --------->ZAT2 <---------ANAC58    <---------ANAC58  <---------ANAC46 --------DOF2<---------ANAC58    --------->ICU4        ------>ZmHOX2a(1)--------->ZAT2              < ---------------------ANAC81 <-----------TGA1 ------>ZmHOX2a(1)      <---------At4g35610   <---------   cttttcatttgattggcttcttacacagcttcgtcatcatgtcttgtcctatccatcctaggcgtctcttcctctgcttgcttatttctctcactttctt  9558800   <---------ETT(2)   --------->WRKY12   --------->WRKY38(1)   --------->DEAR3(1)                                                                     --------->AHL20(2)   --------->ETT(2)                                                                      <---------AHL20(2)  --------->ATERF1(1) <---------ARR14(2)                  --------->ANAC58              --------->YAB1  <------NtERF2       --------->ARR14(2)                  --------->ANAC58         --------->AHL20(2) ---------DEAR3(1)<---------At4g35610                    --------->ZAT18    ----------->GT1 -DOF2   <-----------HVH21   --------->WRKY18(1)    ---------->DOF2 ------->TEIL --------->ICU4   <--   cgtcgtcgacccttcatcgcagcatatcgaggtcaagaagaaacaaatgcgagagaaagtacgcgagatgtatgtaagcagtgatttttatattaattct  9558900                                                                                                   --                                                                     --------->YAB1              <---                                                                    ----------->HVH21          ------                                                                   --------->SPL7          --------->ARR14(2)                                                                <---------ANAC46           <---------ARR14(2)                                                                <---------ANAC58          <---------GLK1(1)                                                            --------->YAB1   <---------ANAC55(2) <---                                                     <---------GLK1(2)       --------->ANAC55(2)<----    <---------MYB59                             <-----------GT1 <---------ANAC58         ------->TEIL -------ICU4                         <---------CCA1(2)     <---------ATHB12--------->AHL20(2)<-------   tcatgacccaatttgtttagcaactattgaaaacccttcaaatctcgtttttacaggttctatcatgcgtatgacaattacatgacttatgcatttccgg  9559000     ------>ZmHOX2a(2)   --------->ARR11(3)   <---------ARR11(3) ------->MYB52(2) -----P  <---------DAG2 --->LBD16                                                             --------->ICU4 ------MYB52(1)       <---------GLK1(1)                            ------->GAMYB---------->DOF2 -----MYB52(1)  <---------MYB46(3)                         --------->GLK1(1) --------->At4g35610 --LBD16 <----------DOF2                      --------->ZAT6    ----------->RAV1(1)           -------   ttagtgatctactttaagttgttgaattctggctactgggtttggattacactaagttctgaattccaacagcatgatgagctaaagcctctaactaaaa  9559100  Previous    Next  AGI:  At1g27510.1    Description:  similar to EX1 (EXECUTER1) [Arabidopsis thaliana] (TAIR:AT4G33630.1); similar to EX1 (EXECUTER1) [Arabidopsis thaliana] (TAIR:AT4G33630.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO64344.1) Range:  from: 9554732    to: 9558354    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g27520.1    Description:  glycoside hydrolase family 47 protein. similar to glycoside hydrolase family 47 protein [Arabidopsis thaliana] (TAIR:AT5G43710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64392.1); similar to hypothetical protein OsI_008710 [Oryza sativa (indica cultivar-group)] (GB:EAY87477.1); similar to hypothetical protein OsJ_008052 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24569.1); contains InterPro domain Glycoside hydrolase, family 47; (InterPro:IPR001382) Range:  from: 9558622    to: 9562368    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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