Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------YAB1                                --------->ANAC46                                --------->bZIP60(2)                                      --------->WOX13(1)  <---------ICU4             <---------ZAT18                                ------>ZmHOX2a(2) -->ZmHOX2a(1)               <---------ZAT14                              --------->ARR11(3) XXXXXXXX -----MYB59                  --------->ZAT18      ----------->RAV1(1)     <---------ARR11(3)<-------- --->ID1                 <------ZmHOX2a(1)    <---------ZAT14  --------->YAB1         ------->TEIL   taactcattacatctactcagacctaaggagagcacatcacaatagactgaacaacattttgcaatcgaaactgatgatcttgaaatgaatccatcaata  9528500                                                                                               ------                                                                                            ---------                                                                                            ---------                                                                                    ------>ZmHOX2a(2)                                                                                   <------ZmHOX2a(2)                                                                                  --------->ARR11(3)                                                 <------NtERF2                    <---------ARR11(3)                  <---------ICU4                <---------MYB46(3)                <-----------ARR10               --------->WOX13(1)               --------->LBD16                   --------->GLK1(2)      ----------->GT1                          <---------ANAC58                   --------->ARR14(2)      --------->ANAC46                         <---------ANAC46                   <---------AGP1 ----      --------->ANAC58                         <---------ANAC58                   <---------ARR14(2) XXXXXXXXXXXX>MIR774B*           ------>ZmHOX2a(1)                               <------ZmHOX2a(1) -ICU4--------->ANAC58         --------->YAB1 <---------LBD16              --------->CCA1(2)---------   ctttcaacacgaaaaatccatcaatacattcaatcctaatctatccttggcgggtaattgtagggaagtgaacgcagataagaggatctagactacgaaa  9528600                                                                        <------NtERF2                                                                      <---------ANAC58                                                                      <---------ANAC58                                                              --------->MYB52(1)                                                             ----------->HVH21                                                     ------>MYB83 --------->ATERF1(1) ---->DOF2                                 <------ZmHOX2a(1) --------->ANAC46          <---------DAG2 >ANAC58                     --------------->AGL15   ------>MYB46(1) <------NtERF2     <----------DOF2 >ANAC58                     <---------------AGL15 <---------MYB111(1)<---------ANAC46<---------ANAC58 ------->GT1               --------->TOE2(3)     --------->ARR14(2)  --------->ATERF1(1)       ------ >ANAC46                   --------->TOE1(3)     <---------ARR14(2)<---------DEAR3(1) <---------ANAC58   agagaaatgttctctcaaaaacccataaaccctaaaaatggaataggagagtacctgccaaacacgacggaggcgggttttggcattggctttacgagta  9528700                                                                                  --------->MYB46(3)                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                                ------->TEIL                                     <---------ANAC58                        --------->ANAC46                                     <---------ANAC58                        --------->ANAC58                   ---------->DOF2<---------ARR14(2)                         --------->ANAC58         <---------ARR14(2)       --------->ARR14(2)                       ---------->DOF2         --------->ARR14(2)       <---------GLK1(2)                     --------->ANAC46     <---------ANAC58         <---------LBD16                          --------->LBD16     <---------ANAC58        --------->MYB52(1)                      <-----------------AGL1         < <--------P  --------->At4g35610--------->LBD16           <xxxxxxxxxxxxxxxxxsmallRNA(si3)   ------>ZmHOX2a(1) --->ALFIN1------>ZmHOX2a(2)--------->AtMYB61      <---------ICU4 <---------GLK1(1)      ------>ZmHOX2a(1)   ggggttagcttgatccgcttccaaagaagaccaccggaatcgtgcttcttcactaattccatcactcgagttccccaaaacgcacccattcctcctccca  9528800                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                               --------->ARR14(3)                               <---------ARR14(3)   <------NtERF2               <---------ARR14(2)  ------>NtERF2                <---------AGP1  <---------ATERF1(1)          --------->ARR14(2)  <------NtERF2                --------->ARR11(3)                *TSS --------->DEAR3(1)            <---------ARR11(3)            <---------ATHB12 --------->RAP2.6(2)         ----------->ARR10             --------->WOX13(1)  <----------DOF2 ---------RAP2.6(2)        ---------->DOF2          <-----------GT1        <---------ZAT18   tggccgcctctctcgttctctctcaagagcaaagatcttagattagttcgagtttttccttcaatcagcccatttagtagactttaggcccatttcatct  9528900                                  <---------ICU4                                  --------->YAB1                              <---------AHL20(2)                             --------->AHL20(2)                                <---------YAB1                             <---------AHL20(2)                          ------->MYC3                         <----------DOF2  <---------YAB1                 <-------MYC3      <---------TOE1(3)                      <-----------GT1 <---------ARR14(2)           <-----------GT1         <---------TOE2(3)                 <---------AHL20(2)   <---------GLK1(2)        --------->AHL20(1)         <----------             --------->AHL20(2)--------->YAB1                  <---------AHL20(2)     <----------DOF2   <---------DAG2--------->AHL20(2)<---------TOE2(3)           --------->AHL20(2)     <---------DAG2   <----------DOF2--------->AHL20(2) <------ZmHOX2a(1)        --------->AHL20(2)--------->YAB1   acgagctttttttgaataaataattttcttttttaataaggattctaatttgattcacaacaaaattaattaccacatgttttcataacttttcaggtta  9529000                                               --------->ZAT14                                               <---------ZAT14                                             --------->ZAT14                                             --------->ZAT18                                  <------                                             <---------ZAT14                         ------->GAMYB                                --------->ANAC58       <---------AHL20(2)           <---------MYB52(2)                   <---------WOX13(1)      <---------------AtSPL8           <---------------AtSPL8                 --------->ATHB12         <---------ANAC46     --------->WOX13(1)   --------->MYB46(3)                <---------YAB1  --------->ANAC58 ----------->GT1            <---------------AtSPL3 -RAV1(2)     --------->ANAC55(2)    ---------->DOF2 <---------YAB1         --------------->AtSPL8  -   ttggacattgaaacttacatgattggagttagccaagacaaaaggagtgtacagtattatatgatcaatcgaagagaaaatgtacaacaaacttggtaca  9529100                                                                                      --------->ANAC58 -TEIL                            --------->AHL20(2)           <---------TOE2(3)      --------->ANAC58 ------>TEIL       <---------TOE2(3)             <------ZmHOX2a(1)                 ---------->DOF2   tgtacctcgagtaaatgtactaatgttatctacaaaaaaaatccactcggaggacttggacttctaatgtttttgaagtgctatagaaaggcaacaacgt  9529200                                                                         --------->LBD16                                                                        ------->GAMYB                                                                      ===============================                                                                      --------->MYB52(1)                                                                      -------->P                                                                    --------->MYB46(3)     <---------ANAC58                                                                   <---------At4g35610     <---------ANAC58                          ---------->DOF2                          --------->At4g35610   --------->ZAT14                   --------->CCA1(2)                              --------->ANAC58       <---------ZAT14                  <---------ARR11(3)                              --------->ANAC58  --------->ZAT14                  --------->ARR14(2)                        <-----------RAV1(2)--------->At4g35610                  --------->ARR11(3)           <----------DOF2 <-----------HVH21    <---------ZAT14             --------->TOE1(2)         <----------DOF2    <-----------HVH21    --------->ZAT2 <------            --------->ANAC58       ------>ZmHOX2a(1)  <---------TOE2(3) =============================            --------->ANAC58  <---------GLK1(2)<---------DAG2 <---------At4g35610   <---------ZAT18   atgctctaggtgaaacccaagatatacaaaaagattcctctctttctgactttaccaaggtttcaggtcagcaaccggaccagcagtccagttcagtgcc  9529300                                           --------->LBD16                                          <---------ANAC58                                 <---------ANAC58   =========================================MYC_MYB   ==============================bZIP_DOF <---------ANAC58   ----------->RAV1(2)           ----------->GT1   <---------At4g35610           <---------ANAC58           <---------ARR14(2)   --------->At4g35610        --------->ALFIN1        <---------MYB52(1)   --------->O2             <---------ANAC46         <-------GAMYB   <---------O2 --------->ARR14(2)   --------->HSFC1(2)  --------->ANAC55(2)   <---------TGA1a          <---------ANAC58 --------->ZAT2 --------->ARR14(2)   --------->TGA1a          <---------ANAC58 <---------ZAT2 --------->GLK1(2) ============MYC_MYB     <-----------RAV1(1) <---------STY1(2)                <---------LBD16  <----- ---ZAT18       <---------ARR14(2) <--------P--------->STY1(2)            ------->TEIL  <-----------RAV1(2) ============MYC_MYB  <----------DOF2<---------HSFC1(2)  <---------ANAC55(2)  ----------->RAV1(2)   -   ttctcacctgtcttcaagtatatgcttttgtcgtggggtaacttccgagctagcccgttaagtatctgatggaatgcatcccctggttgtgcaggttgag  9529400  Previous    Next  AGI:  At1g27435.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO70078.1) Range:  from: 9527561    to: 9528865    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g27440.1    Description:  GUT2; catalytic. similar to GUT1, catalytic [Arabidopsis thaliana] (TAIR:AT5G61840.1); similar to unknown [Picea sitchensis] (GB:ABK26875.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83159.1); similar to secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] (GB:AAX33320.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) Range:  from: 9529128    to: 9531362    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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