Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <-----------GT1                           <---------ICU4                         <---------AHL20(2)                         <---------AHL20(1)                        --------->YAB1                      --------->AHL20(2)                      --------->AHL20(1)                                                   --------->ANAC46                     --------->YAB1                                            --------->GLK1(1)               --------->TOE2(3)                                            --------->ANAC58         --------->YAB1<---------YAB1                                       --------->ANAC55(2)    --------->WOX13(1)<---------AHL20(2)       <---------MYB59              --------->ANAC46        - --------AHL20(2)--------->AHL20(2)          <---------ARR11(3)             --------->ANAC58        -   tataatcaatctcataacataaattataatatttccatcgaattcaagacctaaactacacatagtgacaatacattcacgaaatccatctccacaaaac  9514700              --------->ANAC55(2)              <---------ANAC55(2)           <---------MYB52(1)--------->YAB1                 --------->GLK1(2)                      -- ==================================HOX2a_HOX2a             <---------GLK1(2)                      <-- ------>ZmHOX2a(1)          <------ZmHOX2a(2) --------->ANAC58               <------ZmHOX2a(1)   ---- -------->TOE2(3)     <-----------HVH21       --------->ANAC58     <------ZmHOX2a(1)             ---- -------->TOE1(3)<-----------HVH21    --------->YAB1  <-----------GT1 --------->ALFIN1   ---------->DOF2   atccttaatattcgttacatatcaggtccgatcatattaatcgaaatgaagcaatttcacaaattctgaggagaggggaggacaagtagaagaaagaaac  9514800                                                                                  <------NtERF2                                                                                  <-------GAMYB                                                                                 <---------DEAR3(2)            --------->ARR14(2)                                                 <------NtERF2            --------->ARR11(3)                                                <---------RAP2.3(1)            <---------ARR11(3)                                                <---------ORA47(2)            <---------ARR14(2)                                               <---------DREB2C(2)           <------ZmHOX2a(1)                                                 <---------RAP2.3(3) ------->TOE1(1)                           <---------ANAC58             ---------->DOF2  --------->GLK1(1) -------LBD16 ------>ZmHOX2a(2)            <---------ANAC58     --------->ANAC58 <---------MYB46(3) ----->TOE1(2)<---------HSFB2a(1)          <---------ANAC46     --------->ANAC58<---------DEAR3(1) ----->TOE2(2)--------->HSFB2a(1)  <---------GLK1(2)       <---------YAB1    <---------DEAR3(1)   ctcggaatcaagaggatcgttcttgtactgagcctcagaatttttgcgagcatgttcgaacatgataagcctttcaaagtcggcggtagagaactccatc  9514900                             <---------ANAC46                  <-----------ARR10                  --------->GLK1(2)                  <---------ARR11(3)           ---------->DOF2   <------MYB46(1)       <---------At4g35610   <------MYB83       --------->At4g35610   <---------ANAC55(1)     <-----------RAV1(2)     <---------ANAC58    <-------TEIL  --------->ARR11(3)                                                    *TSS <-------   --------->GLK1(2)         <---------ANAC58                                        --------->LBD16  <---------ARR14(2)        <---------DEAR3(1)                                      <---------ANAC46  <---------GLK1(2)         --------->MYB52(2)         ---------->DOF2           --------->ARR14(2)  --------->ARR14(2)       <-------TEIL         ---------->DOF2                  <---------ARR14(2)   ttcagattcaggtgaaagaaaatctagggttcggtgtttttgttactgagaaaagtctaaagagttgtctcgatgtgaaacaagttccgagggttttagc  9515000            <-----------GT1          <-------GAMYB       <-------GAMYB    <------------CBF                      <---------HSFB2a(2)       <---------ANAC46--------->ATHB12                       <-----------RAV1(2)   <-----------HVH21   --------->ATHB51           <---------YAB1 ---------->DOF2         --------->TOE2(3)  --------->ANAC46    <---------YAB1<-----------GT1         --------->PCF5               <----------DOF2 ----GT1 --------->ALFIN1      <----------DOF2  --------->YAB1--------->HSFB2a(2)  --------------->AtSPL8   ctacaagtcgggtgttaccagcacataattgggctttttaagcctacttatcaagataagtggcccagaaggcccatatgaacaaatagtactttaatac  9515100                                                                              --------->ARR14(2)                                                                          ===============HOX2a_HOX2a                                                                          ========================HOX2a_HOX2a                                                                          ------>ZmHOX2a(2)                                                                <---------MYB55(2)     <-----------HVH21                                                     --------->ANAC55(2) ================HOX2a_HOX2a                                                     <---------ANAC55(1) <------ZmHOX2a(2)                                                     <---------ANAC55(2) =========================HOX2a_HOX2a                      *TSS<---------TOE1(3)    --------->AHL20(2)        --------->GLK1(1)              <---------ARR14(2)               --------->AHL20(1)       --------->ARR11(3)              --------->ARR14(2)               <---------ARR11(3)       <---------ARR11(3)          <---------TOE2(3)              <-----------GT1        --------->MYB46(3)------>ZmHOX2a(1)       <---------MYB52(2) <---------TOE2(3)    <---------AHL20(1)      --------->GLK1(1)   ------>ZmHOX2a(1)   actagttcaactaatgtattcgccgattagggtttcttctgtttcactatatattaagtgtctccaactactgagatctctatcctctccgtcctctgtt  9515200           <------NtERF2          ------>NtERF2          <------NtERF2<---------ANAC58          <---------RAP2.6(3)         --------->RAP2.6(2)         <---------ATERF1(2)         --------->ATERF1(2)         --------->ANAC46         --------->ANAC58         --------->ANAC58         --------->DEAR3(1)     --------->ZAT14        <---------RAP2.6(2) --------->ZAT6  --------->ATHB12     <---------ANAC58                                                        <----- <---------YAB1 --------->At5g28300    ---------->ID1 <-----------GT1    ------>ZmHOX2a(1)---------->ID1   cttctcattggccgccatggtaaatgcgttacactagactcgtcgttacaacgttttcacttctaacttatgctcctatacttatgttcttcgtcttctt  9515300                                                                                                  <--                   --------->ZAT14                                                                <--               --------------->AtSPL8                                                        <-------               <---------------AtSPL8                                                       <--------               --------------->AtSPL3         ------>MYB83                              --------->ANAC58           --------->At4g35610                ------>MYB46(1)            <---------MYB52(1) ---------           <---------At4g35610           <-----------GT1      --------->YAB1            --------->ANAC58 ----YAB1<-----------RAV1(2)        --------->YAB1         <----------DOF2              --------->ANAC46   attgtttttcttcaggtgaagtactctcaagagcccgataatatcaccaaatgtaagaacactttcatagtctctgttattttttgcttcaagctacact  9515400                                                                                                  <--                                                                                                -----                                                                                                <----                                                                                                <----                                                                                            <--------                                                                                          ------>ZmHOX2a(2)                                                                                         <------ZmHOX2a(2)                                                                       <---------AtLEC2 --------->ARR14(2)     <---------ANAC58    --------->YAB1                   <---------ANAC46         --------->ARR14(2)     <---------ANAC58   --------->ICU4                    <---------ANAC58         <---------ARR14(2) -------MYB52(1) --------->CCA1(2)                        <---------ANAC58        <------ZmHOX2a(1)<- -------YAB1  --------->ANAC58                     <------MYB83   --------->ZAT2  ==============HOX2a_HOX2a --ALFIN1     --------->ANAC58                 --------->ATHB12   <---------At4g35610   <---------ARR14(2) -ZAT14   --------->TOE2(3)     --------->ATHB12   <------MYB46(1)--------->At4g35610<------NtERF2--- >ZAT14 -------->P      <---------ATHB12      <---------YAB1      <---------ZAT2  ===============HOX2a_HOX2a   gttattggcttacctcaagctatgcaatgagtattcattgaaatggtttcgattggttttgcgtttgcagcttgcaaggcgagaggagccgatctcaggg  9515500                                  ------>ZmHOX2a(2)                                 --------->GLK1(1)                                 <------ZmHOX2a(2)                               <---------CCA1(2)                               <---------ARR14(1)                              --------->LBD16        --------->At5g28300  --------->ANAC55(2)      <---------TOE2(3)      <---------ANAC55(2)      <---------TOE1(3)      <---------HSFB2a(2) -------ZAT18                --------->HSFB2a(2) ---->ARR14(2)              <---------LBD16 -----PCF5      <---------ANAC58--------->ARR14(2) -----TCP16(1)  <---------ANAC58<---------ARR11(3) -LBD16----------->GT1 --------->ICU4      --------->AHL20(2)    ------>ZmHOX2a(1) --------ALFIN1 <---------ANAC46<---------ARR14(2)    --------->ANAC55(2)   <---------TOE2(3) ------>ZAT18 --------->ARR11(3)<---------AGP1        <---------ANAC55(2)   <---------YAB1   tccacttcaaggtaaatttcttgtactgattccggatctcaaaaatgaattagattaagtgattttcctatggggattaagcttgtagtttgaataaaac  9515600  Previous    Next  AGI:  At1g27390.1    Description:  TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2). Identical to Mitochondrial import receptor subunit TOM20-2 (TOM20-2) [Arabidopsis Thaliana] (GB:P82873;GB:Q9FZJ6); similar to TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3), P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] (TAIR:AT3G27080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49013.1); contains InterPro domain Plant specific mitochondrial import receptor subunit TOM20; (InterPro:IPR010547) Range:  from: 9513076    to: 9514988    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g27400.1    Description:  60S ribosomal protein L17 (RPL17A). Identical to 60S ribosomal protein L17-1 (RPL17A) [Arabidopsis Thaliana] (GB:Q93VI3;GB:Q9FZJ5); similar to 60S ribosomal protein L17 (RPL17B) [Arabidopsis thaliana] (TAIR:AT1G67430.1); similar to ribosomal protein [Petunia x hybrida] (GB:AAL09401.1); contains InterPro domain Ribosomal protein L22/L17, eukaryotic/archaeal; (InterPro:IPR005721); contains InterPro domain Ribosomal protein L22/L17; (InterPro:IPR001063) Range:  from: 9515122    to: 9516927    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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