Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <-------TEIL      <---------YAB1                                          <---------MYB52(2)      <---------TOE2(3)                                    <----------ID1                  ---------- ----->MYB52(1)               --------->MYB46(3)     --------->AHL20(2)                    <--------- >GAMYB  --------->CCA1(2) --------->REM1(1)     --------->AHL20(2)        <---------AHL20(2)     ---   aagggattaagatacaagttatccatgcttcaacaaatccaattcgcctaataaactaaataccacaaacgtcttattttcttagagacaataccaaaaa  9507900                                                                                  --------->ANAC58                                                                                 <-------TEIL                                                                                --------->ARR14(1)                                                                               <---------ARR14(2)                                                                               --------->ARR11(1)                                                                               <---------GLK1(2)                            >>>>>>>>>>>>>>>>>LFY                     --------->AHL20(2)    --------->AHL20(1)                           --------->ANAC58                          <---------ICU4        --------->ARR11(3)                           --------->ANAC58                         <---------AHL20(2)     <---------ARR11(3)                        <---------ARR14(2)                          --------->AHL20(2)     <---------AHL20(1) ----->AGL15            --------->ARR14(2)                          --------->ICU4--------->ANAC58 --------AGL3           <---------GLK1(2)                           <---------ATHB51     <---------ARR11(3) --------------------->ANAC81       <-----------GT1      --------->MYB52(1)    --------->ARR14(2)   atggagacagaccaaaaaaaaaacacgattcgccattgtaacaaatttcaatgtctacttaacagaagaaataatttcatagattcgccatgatatattt  9508000                                                                         ---------->DOF2                                                                         <---------ZAT14          ---                                                         --------->HSFB2a(2)               --------->CCA1(2)                                                --------->DAG2    <------MYB46(1)          --------->GLK1(1)                                   <-----------ARR10     <---------HSFB2a(2)              --------->ARR11(1)                          ---------->DOF2--------->LBD16 <---------HSFC1(1)               <---------ARR14(2)                        --------->AHL20(2)     ---------->DOF2    <------MYB83            --------->ARR11(3)                 --------->At4g35610   <---------LBD16   --------->HSFC1(1)               --------->ARR14(2)                 <---------At4g35610   <-----------RAV1(2)     >>>>>>>>>CBP60g            <---------ARR11(3)                <---------TOE2(3) <---------CCA1(2)      ------>ZmHOX2a(1)--------->DAG2----------->ARR10   --------->MYB52(1)   <---------AHL20(2)<------ZmHOX2a(1)    >>>>>>>>>SARD1          <-------------   ctacttaacagaagaattaagctaaattaaaagcccaaatctcaggagaaaaagtattcctagaaatttggtgagtaaagtaagagaagagagatatgca  9508100                                                                                     <------NtERF2                                                                         --------->LBD16  ------>ZmHOX2a(2)                                                                        <---------HSFB2a(2)                              --------->TOE2(3)                  ---------->DOF2   <---------DEAR3(1)          --------->DAG2      =======================================================================         ---------->DOF2      --------------->AGL15         --------->DEAR3(1)  --------->MYB52(2)     --------->AHL20(2)       --------->TOE1(3)          --------->DEAR3(1)   <--------P <------ZmHOX2a(2) ------->DOF2              <---------ARR14(2)           --------->DEAR3(2)  <---------MYB46(3) --------WRI1              --------->ARR14(2)     <------ZmHOX2a(1)    <---------LBD16  <---------ARR14(2)   caaagaataaaaaaagtaagagaagagagaaacctcaagtagaaaacagagaggagagaccgccgaagaaagctccggaggttagtcggcgatcggagaa  9508200                                                         <---------ARR14(2)                                                         --------->GLK1(2)                                                        --------->ARR14(2)                       <---                                                    --------->LBD16*TSS       <---------AHL20(2)-----            ---------->DOF2               <---------ICU4<---------ARR14(2)    --------->AHL20(2)<----       <---------------AGL15              --------->ATHB51        --------->At4g35610           <----       --------------->AGL15 <------ZmHOX2a(1)    ---------->CDC5 <---------At4g35610      ---------- ======================MADS_MADS<------ZmHOX2a(1) <-----------RAV1(2)  <----------DOF2   ------>ZmHOX2a(1)   gaaagactactactaagagcgagagtgagaaggaggagacaccataatcgcctcaggggaatcggatgagctgctttcgattaatttcatccttccaatt  9508300                                                                                            <--------                                                                                          <---------ICU4                                                                                          --------->ATHB12                                                                                         --------->ICU4                                                                                         <---------YAB1                                                                                        -------------                                                              --------->AHL20(2)       <-------------                             <---------DAG2                  --------->AHL20(2)        --------------                        <----------DOF2                  --------->AHL20(2)            <-------------                    <-----------GT1                      <---------AHL20(2)            --------->YAB1 <-----------GT1   <-----------GT1                   <---------DAG2                 <----------DOF2 ------AHL20(2)   --------->KAN4(2)                  <----------DOF2               <---------ANAC58 ---->AHL20(2)   <---------ICU4                     <---------ANAC58           <---------ANAC58<----- -----AHL20(2)   --------->ATHB51                 <-----------GT1  <-----------GT1 <---------ANAC58 -----AHL20(1)  <---------MYB52(1)  <-----------GT1 <---------ANAC58        <---------GLK1(2)  ------ -->CBF    ---------->ID1    <----------DOF2  <----------DOF2<---------AHL20(2)<---------ANAC58<-----   ttttttcatttttgttccattattccctttcctttttcttactgttttctttttgctttttaaataatttttctcttcgattcttgctttcatgattggg  9508400                                                                            --------->ICU4 <---------DAG2                         <---------ANAC58                  --------->AHL20(2) <----------DOF2                        ----------->GT1                  <---------AHL20(2) -WOX13(1)                              <---------ANAC58                 --------->AHL20(2) -->AGL15                  <---------ANAC46                              <---------ATHB51 ----AG                    <---------ANAC55(1)                           <---------ATHB12           - --->AGL1 <---------At5g28300           <---------ANAC46          --------->bZIP60(1)        <------- ----AGL1<-----------GT1   <---------ANAC58                       <---------bZIP60(1)        -------- ----ANAC58       ----------->GT1      ---------->ID1          ----------->HVH21             <------- ----->GT1---------->DOF2  <---------ANAC58                  --------->ANAC55(2)        --------->ZAT14 ----ANAC58  <---------At4g35610  <----------DOF2            <---------ANAC55(2)        <---------ZAT14   taacttttttgttacagcgcatgtaaatttcgtgttcttttggcgtaaattttgaagtagattacatgacatcaaataattttgaagtagtttactgcag  9508500                                              <-----------GT1                                             <<<<<<<<<<GT-3b                                     --------->ICU4                                   <---------AHL20(2)         <---------------AGL15    --------->AHL20(2) --------->DOF2                   <---------AHL20(2) --ZAT14 --------------->AGL15--------->AHL20(2)        <<<<<<<<<TBF1        --------->ATHB12 ->ZAT14 <---------YAB1       <---------AHL20(2)  <<<<<<<<<TBF1             --------->ICU4         <- --At4g35610              <-------TEIL<---------ICU4 <<<<<<<<<TBF1   ----------->GT1            -----   ataaaagttttctaatagtagacaaatattcatttattaattagtatttttcttcttcttcttcttgtagatagaaaaatgatttgatagaaaatgtttt  9508600                                                                            <---------AHL20(2)                                                    ----------->GT1     --------->ATHB51                                                   --------->ANAC58     <---------ICU4                                        <---------ARR11(3)    --------->GLK1(2)                                        --------->GLK1(2)     --------->ARR11(3)                                        --------->ARR11(3)    <---------ARR11(3)    <---------ARR14(2)                  --------->ARR14(2)   --------->RVE1(1)    --------->ARR11(3)        <-----------GT1      --------->ANAC58     <---------AHL20(2)    <------   <---------CCA1(2)      --------->AHL20(2)       ----------->GT1      --------->AHL20(2)  --------- ----------GT1            <---------AHL20(2)     --------->MYB52(1)  <---------ICU4         --------- ------>GT1             <---------YAB1  <---------ARR14(2) --------->AHL20(2)              ----------   gtaacatatctagagcaaatgagattatttttttacctagaaaatctacaagaacggaaaaaaaaatctaagaattatttcatttaagtaaaacggtaac  9508700                                                                                                   --                                                                                            ------->TEIL                                                                                         --------->ANAC55(2)                                                                                        -------------                                                                                        ------->TEIL                                                                                        -------------  <---------ANAC58                                                          <---------TOE1(3)<-------  <---------ANAC58                                                          <---------TOE2(3)<-------  <---------ANAC46                                                  <---------AHL20(2)  <-------TEIL- ---DOF5.7(2)                                  ---------->DOF2  --------->ATHB12    ------->TEIL   -- >At5g28300     ----------->GT1----------------->AGL1          <---------YAB1       <---------------AtSPL8 >DOF5.7(2)   <---------YAB1   ----------------->AG            --------->ICU4       <---------------AtSPL3 ->GT1---------->DOF2         -------->P   ----------->GT1 <---------WOX13(1)       --------------->AtSPL8   gagttcgtgaaagatgatgagtaacaaaaacttaccaaaactgaatagttaaaggaatgagattgattattgaattttgaggtatgtatgtacgtacttg  9508800  Previous    Next  AGI:  At1g27370.1    Description:  squamosa promoter-binding protein-like 10 (SPL10). Identical to Squamosa promoter-binding-like protein 10 (SPL10) [Arabidopsis Thaliana] (GB:Q8S9L0;GB:Q2V4K9;GB:Q9FZJ9;GB:Q9ZW53); similar to squamosa promoter-binding protein-like 11 (SPL11) [Arabidopsis thaliana] (TAIR:AT1G27360.4); similar to squamosa promoter-binding protein-like 11 (SPL11) [Arabidopsis thaliana] (TAIR:AT1G27360.3); similar to squamosa promoter-binding protein-like 11 (SPL11) [Arabidopsis thaliana] (TAIR:AT1G27360.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO66157.1); contains InterPro domain Transcription factor, SBP-box; (InterPro:IPR004333) Range:  from: 9505188    to: 9508267    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g27380.1    Description:  RIC2 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 2). contains InterPro domain PAK-box/P21-Rho-binding (InterPro:IPR000095) Range:  from: 9508748    to: 9510044    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version