Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------MYB52(1)                                                                  <--             <---------RAP2.6(3)                                                             --------       <---------At4g35610                                                                   --------       --------->At4g35610                                                                   <-------       --------->ZAT2                                                                     <------ZmHOX2a(1)       <---------ZAT2                                                                   --------->MYB59    <---------ANAC58                                                                --------->MYB111(1)    <---------ANAC58                                                                --------->MYB111(2)   <---------At4g35610                                                              --------->MYB59   --------->ZAT2    ----------->HVH21                                              --------->MYB46(2)   --------->At4g35610                                                              --------->MYB52(2)   <---------ZAT2  <----------DOF2                                            <------ZmHOX2a(1)   --- -->MYB52(1)<---------ANAC46    <---------AHL20(2)       <----------DOF2    <---------TOE2(3)<------- ---ICU4  ------>NtERF2      ----------->GT1 ---------->DOF2      <----------DOF2------------>MYB.PH3(2)   ggctgagcttgctgccgttttctttgacatatagttaattcaatgtgtaaagttgtaagctttttagtctttggttttgaggaagttagttaggaacctt  9501600       ---------->DOF2 -------HSFB2a(2)                                                        <---------ZAT6 ->HSFC1(2)                                                        --------->ANAC58 ->HSFB2a(1)           <------MYB83                                --------->ANAC58   <---------LBD16 --HSFB2a(1)           <------MYB46(1)                      <---------ANAC58       <----------DOF2 ------>HSFB2a(2)    <--------P                             <---------ANAC58   <---------GLK1(2) --HSFC1(2)   <------ZmHOX2a(1)        --------->YAB1    <---------CCA1(2)  <---------WOX13(1)    ---   ctccaagtacaaaggaggaatgggtagggaagggtttgcaattacaatgtgtacatcgtgtttcttgacaagttactgatagatactttggggaaatttt  9501700                     --------->AHL20(2)                                                            <-          <---------ZAT14                                                                          <-         --------->ALFIN1 <---------ICU4                             ----------->GT1         <-------       <---------ANAC46  --------->AHL20(2)                         --------->DAG2           <-------      <------ZmHOX2a(1)  <---------ATHB12             <---------At4g35610 <-----------GT1 ---------->ID1 ------>ATHB12<------ZmHOX2a(1)                ----------->HVH21   ---------->DOF2 ------>ZmHOX2a(1)   tgatttgaggagtgtaggaccaattcaataaatgccacttagtttttgtgtgatggagatgagaagatgaaaagtaatacccttcctctcttgccctttt  9501800                                                     <-----------HVH21                                                ---------->DOF2                                              <---------YAB1 --------ANAC58                             -------->HAHB4 --------ANAC58                             --------->YAB1                                ------>ZmHOX2a(1) ---DOF2                                   <---------YAB1                  --------->ANAC58 --DAG2             ---------->DOF2       <---------TOE2(3)------------>CBF--------->ANAC58   tgctggtctgggtgaaacatagaaaagtttctcttgctcaagttaatgataaaagggtgagagcaataaacgctgataagccttgtctggtccttggaat  9501900                                               <---------ANAC46                                        <---------ANAC46                                    <-------GAMYB<------NtERF2                                   <---------MYB46(3)     *TSS                                   --------->MYB52(2)   ----------->GT1                        <-----                                   --------->MYB111(2) --------->DAG2                         <------                 --------->YAB1    --------->MYB111(1) <---------TOE1(3)                      <------              <---------CCA1(2)    --------->MYB55(2)  <---------TOE2(3)--------->STY1(2)    --------        <----------DOF2           <--------P--------->ALFIN1           --------->ANAC58    <---------WOX13(1)     <-----------GT1         <------------CBF <------NtERF2            --------->ANAC58  <------ZmHOX2a(1)   tttgaattttctttttctatcttacttatagtattggtagttgagggtgtcgtcgataaggtatctatttgcctagccagagttatatataggattgatt  9502000                                                                                               <-----                                                                           ---------->ID1      <-----                                                                         =========================RAV                                                                         <---------MYB46(3)   -------                                               <---------HSFB2a(2)       <-----------RAV1(1)  -------                                            <---------ARR14(2)        --------->ARR14(2)     <-------     <----------DOF2                        --------->ARR14(2)        <---------ARR14(2)     <------- ----WOX13(1)                           ---------->DOF2              <------ZmHOX2a(1)     <---------MYB46(3) ---ANAC58              ---------->ID1 --------->YAB1              <---------TOE1(2)       --------->MYB55(2) ---ANAC58        <---------YAB1      <---------ATHB12          <---------REM1(1)         <---------AtMYB61 ->ATHB12      <---------YAB1      <---------------AGL15     <---------MYB46(3)       <-----------RAV1(2)   gtctagtcttttcttatatgatttttgttctcatttactaatcaaagttctgcaaacttgtagttgttgtaggatttgttgctctggctctggtggtagg  9502100                                                                                                 <---                 <---------ANAC58                                                         <------ZmHOX2a(1) -MYB46(1)       <---------ANAC46                                                    <---------MYB52(1) -MYB83          <---------ANAC58      --------->ARR14(2)                            --------->WRKY18(1) -->MYB111(1)  --------->ARR14(2)      <---------ARR11(3)                           <-----------HVH21 -->MYB59      <---------ARR14(2)      <---------ARR14(2)                       --------->ARR14(2) --MYB55(1)   <---------CCA1(2)----------->RAV1(1)                              <---------ARR14(2) -- -P      -------->P<---------YAB1      --------->ARR11(3)               <---------ICU4<---------WRKY12   tctatgaaatcaacccatatcgtgaatggactgcaacatggtatcttcgtcccagtgggattgggagcatttgatcatgtccaatccgtcaaggactgaa  9502200                     --------->ATHB12                  ------>MYB46(1)                  ------>MYB83                 --------->MYB55(1)                <---------MYB111(1)              -------->P           --------->ZAT2           --------->At4g35610           <---------At4g35610       --------->MYB52(1)    <---------At4g35610               --------->DAG2    --------->At4g35610  ----------->GT1 --------->ALFIN1 ------At4g35610<---------MYB46(2)   --------->DAG2             <---------ALFIN1                  <-- --------->HVH21<---------MYB59     ---------->DOF2  ------->TEIL                                 ---   gatgacagcaaacagctacctactgagtgggaaattgaaaaaggtgaaggaattgaatctatagttccacatttctcaggccttgagagagtcagtagtg  9502300              <---------HSFB2a(2)              --------->HSFB2a(2)            ----------->RAV1(2)                                          --------->ANAC58           --------->GLK1(2)                                             --------->ANAC58          <---------GLK1(2)                                            --------->LBD16         <---------ZAT2           --------->DAG2                      --------->LBD16    <---------ANAC58         --------->ZAT2  <----------DOF2                             --------->HSFB2a(2) <---------ANAC58       <---------ALFIN1<---------ZAT14       <---------ETT(2)        <---------HSFB2a(2)--------->ZAT2     ------>NtERF2     --------->ZAT14--------->ZAT18               <---------LBD16     <---------ZAT2  ------>NtERF2        --------->At4g35610   --------->ETT(2)    --------->At4g35610   --------->ANAC58 -------ARR14(2)   <---------ALFIN1 --------->At4g35610          <---------At4g35610   --------->ANAC58 ------>ARR14(2)  --------->ZAT18---------->DOF2               <---------ICU4 --------->MYB52(1)   --   gctctgccaccagcttctggcacactgctgtatcgaaaagctcacagtcgacctctatcaactcatcatctcccgaagccaaacgatgcaagcttgcatc  9502400                                                                                               <-----                                                                                              =======                                                                                             ========                                                                                             <------ZmHOX2a(2)                                                                                            ---------                 <---------ANAC58                                                           <--------                 <---------ANAC58                                                 --------->At4g35610               --------->GLK1(2)                          --------->At4g35610     <---------ZAT2              <---------GLK1(2)                           <---------At4g35610     ----------->RAV1(2)         --------->LBD16                                  <---------ZAT2          --------->ZAT2        <---------LBD16                                   --------->ZAT2          <---------At4g35610       ----------->RAV1(2)                            <---------ALFIN1          <-----------RAV1(2)       ==============================RAV              ----------->RAV1(1)  --------->WRKY38(1)------>ZmHOX2a(2)       <---------LBD16                  <-----------RAV1(2)               <---------MYB52(1)<-------- --------->HSFB2a(1)     ----------->RAV1(1)       --------->PCF2    <---------ARR14(2)     --------- --------->HSFC1(2)      ===========================RAV <---------ALFIN1 --------->At4g35610<-------- <---------HSFC1(2)    --------->At4g35610  ----------->HVH21       --------->GLK1(1)       --------- <---------HSFB2a(1)   <---------At4g35610  --------->ALFIN1        <---------GLK1(1)       <-------- -------->DOF2<---------ARR14(2)        ==========================RAV--------->ARR14(2)    <---------CCA1(2)   agaaagttcccctggagattcttgcagcaacatagactttgtccaggtgaaggctcccacagctctcgaggtatccgttgcctcagctgaatcagatctt  9502500  Previous    Next  AGI:  At1g27360.1    Description:  squamosa promoter-binding protein-like 11 (SPL11). Identical to Squamosa promoter-binding-like protein 11 (SPL11) [Arabidopsis Thaliana] (GB:Q9FZK0;GB:Q9ZW54); similar to squamosa promoter-binding protein-like 10 (SPL10) [Arabidopsis thaliana] (TAIR:AT1G27370.4); similar to squamosa promoter-binding protein-like 10 (SPL10) [Arabidopsis thaliana] (TAIR:AT1G27370.2); similar to squamosa promoter-binding protein-like 10 (SPL10) [Arabidopsis thaliana] (TAIR:AT1G27370.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO66157.1); contains InterPro domain Transcription factor, SBP-box; (InterPro:IPR004333) Range:  from: 9501958    to: 9503856    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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