Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  ----------->GT1                                                               --------->DAG2        <------ZmHOX2a(1)                             ---------->DOF2                         <------   <---------------------WRI1                    --------->MYB52(1)                           <------  ------->GAMYB       --------->ZAT6     ------>ZmHOX2a(2)   --------->CCA1(2)                <------ ->AtSPL3     ---------->DOF2          <---------ARR11(3)  --------->CCA1(2)----------->RAV1(2) -----   tcaacagcgaggaatacaaaggaaacactaaaaatcgaagtgatctaaacccaagggaaagagataaggcaaaaaaaaacctggctgaacttgagagcgt  9485500                                                         <-----------RAV1(2)                                                      --------->TCP20                                                      <---------PCF5                                                      <---------PCF2                                                     ----------->HVH21                                                     <------NtERF2                         --------->LBD16            ------>NtERF2                        --------->ETT(1)            <---------ATERF1(1)                        <---------ANAC46          <---------LBD16                          <---------ANAC58                       <---------LBD16          --------->DEAR3(1)             <---------MYB46(3)                 <---------YAB1                 --------->ATERF1(2)           <---------DEAR3(1)   -- ---ANAC46  --------->At4g35610                 <---------ATERF1(2)           <---------AtMYB61    -- ---ANAC58  --------->ZAT2                   --------->AtMYB61                --------->ALFIN1     <- ---ANAC58  <---------At4g35610---------->DOF2--------->MYB52(1)           <---------DEAR3(1)  ------ ---->ALFIN1<---------ZAT2<------NtERF2     --------->MYB46(3)          ----------->HVH21  <---------ANAC58   gttgttcaccagcgagctgaagattgccggagacaaagacgagcataccaccggcgggaccagaaggctgacaatcgacggtggtgatgttgtgcttaca  9485600                                                                                 ------>ZmHOX2a(1)                                                                               --------->HSFC1(2)                                                                               ------>ZmHOX2a(2)                <---------MYB52(1)                   ----------->RAV1(2)       <---------HSFC1(2)               --------->At4g35610                 ------>ZmHOX2a(2)           <---------HSFB2a(1)               <---------DEAR3(2)                  =====================================HOX2a_HOX2a      --------->DAG2                             <---------ARR14(2)            --------->HSFB2a(1)    ---------->DOF2                              <---------ARR11(3)           <------ZmHOX2a(2) <---------HSFB2a(2)<---------ZAT2               --------->ARR11(3)          ------->TEIL --------->HSFB2a(2)<---------At4g35610          <---------AGP1              <---------ARR14(2) ------->ZAT2  <---------At4g35610               --------->ARR14(2)          --------->ARR14(2) ------->At4g35610  --------->At4g35610         <---------CCA1(2)    <---------WRKY38(1)           -- --------ZAT2 <---------DEAR3(1)             <---------LBD16         <---------WRKY12             --- --->ZAT6    <---------ORA47(1)           --------->ZAT18           --------->WRKY18(1)           <--   ctgctggaaagggaggccggtgagcttagcgacgatgttctgagagccctggatcttctggccttcgaaggtcaacatggatccttcttggtatagagaa  9485700                                                                      <-------TEIL           <---------ARR14(2)                ---------->DOF2          ------>ZmHOX2a(2)    <---------LBD16                        --------->ANAC46          <------ZmHOX2a(2) ------>MYB83                           <---------WRKY38(1)         --------->ARR14(2) ------>MYB46(1)                     --------->ZAT18                <---------ARR14(2)              - -------->P--------->ARR14(2)        <---------ZAT18             --------->HSFB2a(2)                - ------->AtMYB61            <---------ANAC46------->GAMYB        <---------HSFB2a(2)       <--------- ------>MYB46(3)         --------->ALFIN1--------->MYB52(1)------->GAMYB <---------CCA1(2) <---------DAG2 -------MYB52(2)<---------AtLEC2    <---------ZAT6      ----------->RAV1(1)  <----------DOF2       --   accaaccctggacgatttgcatcgaaggtggagtagtagtgctcaacgaaagcctttgcaacagcgtctggatccatctctttcttcgtcttcctttttg  9485800              <---------ANAC46              <---------ANAC58              <---------ANAC58           <---------ANAC58           <---------ANAC46                         --------->MYB59     --------->ARR11(3)                          <-------GAMYB ------>ZmHOX2a(1)                      --------->ARR14(2) -------->TOE1(3)           ------->GAMYB ------>ZmHOX2a(2) -------->TOE2(3)  <---------DAG2       <---------ARR14(2) -DOF2     <---------ANAC58<-----------RAV1(2)  ----------->GT1                                ------ ---->ZmHOX2a(2)   <----------DOF2     <------ZmHOX2a(1)    <-----------GT1        *TSS      <-------   atccttagctcttgcgtcgtgctttttcaacaggcgagagaggatcgagagggttagataatttactgaaaaattatacgaatggaccaagactagagat  9485900                                                                         --------->YAB1                                                                        <---------ATHB12                       --------->AHL20(2)                     --------->CCA1(2)                     --------------->AGL15                   --------->ARR11(3)                     <---------------AGL15                   <---------AHL20(1)                     <----------DOF2                         <---------AHL20(2)                     --------->TOE2(3)                 <-------GAMYB   --------->ANAC58                 <---------ARR14(2)                   ----------->GT1  --------->ANAC58              <---------------------WRI1           --------->PCF2     --------->WOX13(1)    --------->ICU4  <-----------------AGL3         --------->PCF5   ------------>CBF --->ARR11(3) <---------TOE2(3)                --------->ALFIN1 <---------------AtSPL8     ---------- --ZAT6      <-----------GT1             <-----------GT1<---------MYB52(1)      ---------->DOF2   actgaaatgagtgtttgacgatactttaaatgggccttatatttttcaagttgggcccgttaatatatgggacaatcaacagtatagctcaattggtaaa  9486000                                  <---------RVE1(1)                     ---------->DOF2                                 <---------GLK1(2)                    <---------AHL20(2)                                 <---------ARR11(3)                <---------AHL20(2)                                 --------->ARR11(3)                --------->AHL20(2)                             ---------->DOF2                  <---------ARR11(3)                            <---------AHL20(2)   <---------YAB1    --------->AHL20(1)                            --------->AHL20(2)--------->GLK1(2)    <---------AHL20(1)     -----------                     --------->ANAC46        <---------GLK1(2)--------->ARR11(3)   <---------MYB52(2)                     --------->REM1(1)    --------->YAB1     --------->YAB1      <-----------GT1----- ->GT1             ------>ZmHOX2a(1)  <---------AHL20(2)    <---------TOE2(3)   --------->AHL20(2) <-   ttgactaacttcatttgattcctacaccatttaaagatttttaatcaaattctgatataactaagataatattttaaagcatttaactaacatggaaaat  9486100                                                                                                -----            --------->AHL20(2)                                                                =======            <---------AHL20(2)                                          --------->YAB1        ------>ZmHOX2a(1)    ----------->GT1                                                     --------->AHL20(2)    <------ >GT1--------->AHL20(2)----------->GT1      <----------DOF2          --------->YAB1           ======= ---->ICU4--------->TOE2(3)   --------->AHL20(2)            ---------->DOF2         ---------->DOF2 --------YAB1<---------AHL20(2)           <---------YAB1---------->DOF2<---------YAB1        --------   tatgaaatgaaatattaattttggatagaaaatttaaaacatttatctttgtgaaataaaaagaaagtctcttataatataacttgtaaagtaatccttt  9486200           ==============================HOX2a_HOX2a           ------>ZmHOX2a(2)          ===============================HOX2a_HOX2a          <------ZmHOX2a(2)                                 <------ZmHOX2a(2)           --------->ATHB12         <---------AGP1                                     =========================HOX2a_HOX2a         --------->AGP1                                    --------->ARR11(3)          <-------TEIL         --------->ARR11(3)                                <---------ARR14(2)       --------->ATHB12        --------->RVE1(1)                                  --------->ARR14(2)      <---------YAB1     ---------->DOF2                                       <---------ARR11(3)    --------->YAB1   <---------HSFB2a(2)                            <---------ARR14(2)            <------ZmHOX2a(2) ---->AHL20(2)          ----------->GT1           --------->ARR14(2)           <---------ARR11(3) =================HOX2a_HOX2a      <---------TOE1(2) --------->HSFB2a(2)       --------->ARR11(3) ----DOF2<---------ARR11(3)       =================================HOX2a_HOX2a<------ZmHOX2a(1) ================HOX2a_HOX2a      ------>ZmHOX2a(1)  <---------HSFB2a(2)  ---------->DOF2 ->TOE2(3)--------->CCA1(2)      --------->TOE2(2)------->TEIL    --------->ALFIN1 --------->ICU4   aaattctaaaagatctaaaacaaaatgagttaaatcctatgtctatgtgttgaatctggaagatcgaggtggaagaaaaaggatcatgattcatgggtga  9486300                  --------->ALFIN1                               --------->ANAC58                <---------ANAC58                                 --------->ANAC58                <---------ANAC46                            <---------TOE2(3)                <---------ANAC58                          <---------AHL20(2)                        <              <------MYB83                            --------->AHL20(1)                        <----              <------MYB46(1)                         --------->AHL20(2)                        =====            <---------WOX13(1)                        <---------AHL20(2)                -------->HAHB4          <---------MYB46(3)                          <---------AHL20(1)                <---------ICU4          --------->ATHB12                           <---------AHL20(2)                 --------->YAB1         --------->WRKY38(1)    --------->ANAC58     --------->AHL20(2)                <---------ATHB12        <---------MYB52(1)      --------->ANAC46 <---------AHL20(2)                    --------->ICU4     --------->MYB46(3)         --------->ANAC58 --------->AHL20(2)          --------->YAB1  <-------  --------->MYB46(3)       <----------DOF2  --------->AHL20(2)   --------->ANAC46      <---------YAB1   gagaacaaccgttgattggtgtgtttcaactttcaagcaatcccattttaaaaaaataaatttatgtaagcaattgcaaacaaaatgaaatgattatgct  9486400  Previous    Next  AGI:  At1g27310.1    Description:  NTF2A (NUCLEAR TRANSPORT FACTOR 2A); Ran GTPase binding / protein transporter. similar to NTF2B (NUCLEAR TRANSPORT FACTOR 2B), Ran GTPase binding / protein transporter [Arabidopsis thaliana] (TAIR:AT1G27970.1); similar to unknown [Populus trichocarpa] (GB:ABK93835.1); contains InterPro domain Nuclear transport factor 2; (InterPro:IPR002075) Range:  from: 9484303    to: 9485883    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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