Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->ARR14(2)                                                                                  --------->GLK1(2)                 --------->LBD16                                                  <---------ARR14(2)                <---------ANAC58                                           ------->GAMYB                <---------ANAC55(1)        <-----------RAV1(2)          --------->MYB52(1)  ---------                <---------ANAC58         <-----------HVH21             <---------WRKY38(1) ----------     <----------DOF2       --------->GLK1(2)                         --------->ANAC58    <---------LBD16    <---------DAG2 --------->SPL7   <---------AHL20(2)               --------->ANAC46   <---------ALFIN1 <-----------GT1<---------ANAC46   --------->ICU4                    --------->ANAC58 -------->P ----------GT1  <---------ANAC55(2)<---------ATHB12                --------->ZAT6 ---------->TaMYB80   ttttcacctttcccaattccgtgcgaaagaatcagcaataaatggtcagggaattgaactctgtcttcaacactcaacggagggaatctaccacggtgaa  9451300                                                                                          --------->ETT(1)                                                                                        <-----------HVH21                                                                                      --------->MYB59                                                                                    --------->GLK1(2)                                                                                    --------->CCA1(2)                                                                                    --------->ARR14(1)                                                                                   <---------ARR14(2)                                                                                   --------->ARR14(2)                                                                                  <---------GLK1(1)              --------->YAB1                                       --------->MYB52(1)<-------TEIL --------->GLK1(2)                                               <---------MYB52(2)<---------GLK1(2) <---------ARR14(2)                                       --------->GLK1(2)      ----------->ARR10 --------->ARR14(2)--------->MYB52(1)                     <---------ARR14(2)  --------->ALFIN1 ------->TEIL----------->GT1                --------->CCA1(2)    --------->MYB46(3)--------->ARR11(1) >At5g28300  <---------YAB1           --------->ANAC46    --------->ARR14(2) <---------ZAT14 ->GT1     --------->YAB1        <------ZmHOX2a(1)       <---------GLK1(2)  --------->ALFIN1     ----   acgaatccatggatgatgataaaacggagagagtaggaacacgaagagacggtctcagagaatcggaacgaacagagagtgtggagattcggtcggaaga  9451400                                                                       <---------ANAC58                                                                ------->TEIL                                                              --------->ZAT14             <----------DOF2                                                            --------------->AtSPL3   <---------ANAC46                                                            --------------->AtSPL8   <---------ANAC58                                                          <---------ARR11(3)         <---------ANAC58                                                        --------->ANAC58            --------------->AtSPL8                               --------->YAB1           --------->ANAC58        --------->MYB52(2)                           ---------->DOF2         <----------ID1      <---------ANAC58 <---------TOE1(2)                       ----------->RAV1(1)         <----------ARF1<----------DOF2   --------------->AtSPL3 ----->CCA1(2)        <----------ID1           <----------DOF2<---------ZAT14 <---------ANAC46 ------   taagaagaagagcaagacgaagaaacaacaaaagcataagattagatacctttgagacaagaactgtacttttacttgttgtttgtttcgtactttcctc  9451500                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                     <--------P                                                                                    <-------GAMYB                                                                                   <------MYB46(1)                                                                                   <---------MYB46(3)                                                                                   <------MYB83                      --------->At4g35610                                          --------->MYB55(2)                   <---------MYB52(1)                                              --------->MYB52(2)                  <-----------HVH21               <<<<<<<<<TBF1                   <---------AtMYB61                  <-----------TGA1            <-----------GT1               ---------->DOF2         <---------YAB1                   <----------DOF2   <---------MYB46(3)    --------->ALFIN1  - >ZmHOX2a(1)     --------->ANAC46         <---------DAG2    --------->MYB52(2)--------->DAG2        -   ttcttcccattctcatactccgtcatcttcaagaaaaattgaaacttttttcttcttctggtttgttagaaacagagcaaaagggtggttgcttaataaa  9451600                                                        ---------->DOF2                                                    ------>NtERF2                                                    <---------RAP2.6(3)                                                    ----------->RAV1(1)                                                 --------->ATERF1(1)                                                 <------NtERF2                                                 <---------ATERF1(1)                                                <---------ATERF1(1)                                                --------->ORA47(1)                                               --------->ATERF1(2)                                               --------->RAP2.3(3)                                               <---------DEAR3(1)                                               --------->DEAR3(1)                                              --------->RAP2.3(1)                                              <------NtERF2                                              --------->DEAR4(2)                                              --------->ATERF1(1)                                             <---------RRTF1(1)                                             <---------ATERF1(1)                                             ------>NtERF2                                             <---------RAP2.3(1)                                  ------>ZmHOX2a(2)--------->RAP2.6(2)                                 --------->CCA1(2) --------->At1g77200                                 <------ZmHOX2a(2) <---------ETT(2)                                <---------AGP1--------->DEAR3(2)                                --------->ARR14(2) --------->DREB2C(2)                                --------->AGP1--------->ORA47(2)                                --------->ARR11(3) <---------ETT(1)                                <---------ARR11(3)--------->SPL7          ----------->GT1       <---------ARR14(2)--------->DEAR3(2)  ------>ZmHOX2a(2)            <---------GLK1(1)------>NtERF2------->TEIL         <----------DOF2  -- -------->ARR11(3)            ----------->ARR10<---------ATERF1(2)           <----------DOF2    <---- -------->AGP1  <-----------GT1--------->GLK1(1)<---------SPL7           ---------->ID1        ------   ctgatctagagaaggtttttactcgtgaagaagagatctggtttttgcgccggccgacaaaagtaccttcttcttgttccttttctttaagagagattaa  9451700                     <---------AHL20(2)                     --------->AHL20(2)            ---------->DOF2        <---------AHL20(1)                                                                        ---        --------->AHL20(1)                                                                        ---       --------->AHL20(2) ----------->GT1                           --------->ICU4         --------->ANAC58  ----------->GT1   <---------AHL20(2)                       --------->DAG2                --------->ANAC58 -------->DOF2      --------->AHL20(2)                  <---------TOE2(3)                ---------->DOF2 -----TOE2(3) <---------TOE2(3)                --------->ATHB12----------->GT1   ---------->DOF2  --- ---->DOF2 <---------AHL20(2)        *TSS     <---------YAB1---------->DOF2  <---------YAB1----------   agaaaggaaatatataaaggaatttaatttgtgaaatattgtttgattttgatttgttaagaaaaaggaaataatcgttgtgataaagaaggaaagaaac  9451800                                                <------NtERF2        --------->ATHB12                                               --------->MYB52(1)    --------->YAB1                                               ------>NtERF2         -------->ATHB1         ---------                                           --------->ANAC46          <---------ICU4         <--------                                           --------->ANAC58         --------->ICU4    <---------ANAC58 ------>ANAC46                --------->HSFB2a(2)                   <---------ATHB12  <---------ANAC58 ------>ANAC58    <-----------GT1          --------->ANAC58       --------->YAB1<----------DOF2   --- ------>ANAC58  <----------DOF2--------->ANAC55(2)            --------->ZAT6    <---------DAG2------- ->GT1       <-----------GT1  <---------HSFB2a(2)--------->DEAR3(1) <---------YAB1   ---------->ID1 <   aaggaagacgcgttttttctttacgagtcgttctcgtaatcttgtaagccaccgaagattagtagcactaatcattgtcttacttttggcttaattaaaa  9451900                                                                 <---------ICU4                                                              --------->ATHB51                                                              <---------ICU4                                                              -------->HAHB4                                                              --------->YAB1                                                              <--------ATHB1    --------->AHL20(2)                                        <--------HAHB4    <---------AHL20(2)                                       <---------YAB1   <---------WOX13(1)                <----------DOF2         --------->ICU4 >AHL20(2)                          <---------ANAC46         <---------ATHB51 -AHL20(2)  <------ZmHOX2a(1)       <---------ANAC58         --------->AHL20(2) -------->GT1            --------->ICU4                    --------->YAB1 --->DOF2 <---------TOE2(3)--------->AHL20(2)            --------->AHL20(2)     <---------ZAT18 ---------YAB1    ---------->DOF2   <---------ANAC58<---------AtMYB61           --------->ZAT18<-----   gtgtgattaattaaggagattaaagtgatttttatatggcttttatgttttgttttggttttaataattaagacgagaagaggccactagttttgcgact  9452000                                                                                                   --                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                <----                              <---------ARR14(2)                                                <----                              <---------GLK1(2)                                                 -----                      --------->ALFIN1                                                          -----                    <---------bZIP60(2)                   <---------TOE2(3)         <------ZmHOX2a(1)                    <---------ANAC46                    <---------AHL20(2)          =================HOX2a_HOX2a    ---------->DOF2<---------AtMYB61   <----------DOF2 <---------YAB1         --------->DAG2  ------>ZmHOX2a(2) ----ANAC46----------->HVH21  --------->ARR14(2)<-----------GT1              ---------->DOF2---------   tgtgtcaaaagatgcgacgatgaggtggaccatattctcgtcttttgttttttcatttttaatgttttgggattgaagaaaaaggaggaccgatgatccc  9452100       <-----------RAV1(1)    <---------MYB52(1)                        <---------ICU4   <-------GAMYB                              --------->YAB1           <------ZmHOX2a(1) ---------->AtMYB77     <----------DOF2       <--------ATHB1        <------NtERF2 -------->HVH21  <---------AtLEC2             -------->HAHB4       --------->LBD16 --------HVH21   <---------ANAC58            <---------ATHB51     --------->DEAR3(1) ----->LBD16     <---------ANAC55(1)         --------->ICU4      <---------LBD16                <---- -----ANAC58     --------->ANAC55(2)       --------->YAB1    --------->ARR14(1)                 <---- -----ANAC55(2)  <---------ANAC46         --------->AHL20(2) --------->CCA1(2)                 <----- -----O2     <-------GAMYB         --------->ANAC46         --------->ARR11(1)          ------>MYB46(1) -----ANAC58<---------ANAC58      --------->RAP2.6(3)       <---------GLK1(2)           ------>MYB83 ---->O2    <---------ANAC58    <---------SPL7--------->ATHB51<-------TEIL   <------ZmHOX2a(1)<------ ---->ANAC55(2)  <---------ANAC58 --------->SPL7            <---------ARR14(2)        <---------MYB59 >ARR11(3)  <---------ANAC46  <---------ZAT6 <---------YAB1 --------->ARR14(2)  <------ZmHOX2a(1)   gtgacagttgtgttgcgttgcgtggtcttttagtcttacggcaaataataattgtttttcaagattcgccggaggatgaggaggagaaccaaacttgttg  9452200  Previous    Next  AGI:  At1g27200.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G40720.1); similar to unknown [Populus trichocarpa] (GB:ABK95005.1); contains InterPro domain Protein of unknown function DUF23 (InterPro:IPR008166) Range:  from: 9449536    to: 9451737    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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