Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->MYB52(1)                                     --------->ANAC46                                     --------->ANAC55(2)                                     --------->ANAC58                                     <---------ANAC55(2)                                     --------->ANAC58                                   --------->MYB52(1)                                 ------>ZmHOX2a(2)                                 =========================HOX2a_HOX2a                                <------ZmHOX2a(2)         --------->ANAC58                                ==========================HOX2a_HOX2a                               <---------AGP1             --------->ANAC58                               --------->AGP1  --------->CCA1(2) <---------ARR14(2)                               <---------ARR14(2)         <---------MYB52(2)                        -                   --------->KAN4(2)<---------TOE2(3)--------->ANAC58                              <-                  <----------TaMYB80<---------TOE1(3)--------->ANAC58                              --              ------>MYB46(1)  --------->ARR14(2)  <------ZmHOX2a(1)                         ------>ZmHOX2a(2)              ------>MYB83     --------->ARR11(3)--------->ANAC58<---------GLK1(2)          <------ZmHOX2a(2)        <---------MYB55(2)     <-----------ARR10 --------->ANAC58--------->ARR14(2)        <---------ARR11(3)        --------->MYB46(3)     <---------ARR11(3)<---------TOE2(3)--------->CCA1(2)        --------->ARR11(3)   tcggaatcgaaccaccaagcttattcccagacagatctaacgtaacgagataaggaagccacgaacagatttgagaaggaatcgaaccagagagatcgtt  9448400          --------->LBD16       --------->CCA1(2)       <------ZmHOX2a(2)      <---------ARR11(3)      --------->AGP1                                          --------->ZAT2      --------->ARR14(2)                                      <---------ZAT2      <---------ARR14(2)                                      <---------At4g35610      --------->ARR11(3)                                --------->DEAR3(1)     --------->GLK1(1)       ---------->DOF2           --------->DEAR3(2)                        ----     <---------GLK1(1)   <----------ID1         <---------GLK1(2)            <---------At4g35610----- -------->LBD16 ----------->GT1                <------ZmHOX2a(1)      --------->ATHB12          <---- --------HSFB2a(2)       --------->ANAC46   <-----------RAV1(2)  <-------TEIL--------->At4g35610<---- ------->HSFB2a(2)    --------->TOE1(2)     <---------LBD16   --------->At4g35610   ----------->GT1   tccagagagatccagagattgtaaactacgacaaagcttaagagactcaggaatctcaccggcgagctgcatcgattgaagctgaagagaaataatccga  9448500            <-----------RAV1(2)                                                           <---------HSFB2a(1)            --------->HSFB2a(2)                                                   <---------HSFB2a(2)            <---------HSFB2a(2)--------->At4g35610                       --------->ARR14(2)   ------>ZmHOX2a(2)  <----------DOF2 <------ZmHOX2a(1)                                      <---------ARR14(2)<------ZmHOX2a(1) ----->GLK1(2)   --------->ANAC58               --------->At4g35610     <------ZmHOX2a(1) <---------HSFC1(2) ---->ARR14(2)   --------->ANAC58               <---------At4g35610     =============================HOX2a_HOX2a -----GLK1(2) <---------ZAT2   <---------At4g35610             ---------->DOF2    --------->HSFB2a(2) -----ARR14(2)--------->ZAT2 <---------ZAT18   --------->GLK1(2)     <---------LBD16      --------->HSFC1(2)   ttctctttctcgttccagcaggaaacaccagtgagcttacaaatcgaagaagctgaagagtttgggaaagaccaggaactgagtctagaagaaggatcga  9448600                                                   >>>>>>>>>TBF1                                                >>>>>>>>>TBF1                                         <---------ZAT2                                         ----------->RAV1(2)                                         --------->ZAT2               --------->TOE1(2)         <---------At4g35610               --------->TOE2(3)         --------->At4g35610                    --------->ANAC58               --------->TOE2(2)       <-----------RAV1(2)    --------->CCA1(2) --------->ANAC58   --   tgagtgagtttttcaaaccttggagacagagaacgtcgtcttcagctgaagaagaagaacagagaaacgagcttatgaagagaagccataagagtgtgat  9448700                 <---------TOE2(3)            --------->ATHB12            <---------ICU4           --------->ICU4           <---------YAB1   =======================HOX2a_HOX2a   ------>ZmHOX2a(2)          <---------ARR11(3)  <------ZmHOX2a(2)       ------>ZmHOX2a(2)  ========================HOX2a_HOX2a    <---------TOE1(3)                  >>>>>>>>>TBF1 <-----------ARR10      --------->ARR14(2)                              <------NtERF2 <---------ARR14(2)     ------->TEIL     <---------TOE1(2)            <---------ANAC58 --------->ARR14(3)     <---------ARR14(2)                            <---------ANAC58 <---------ARR14(3)     <---------AGP1   <---------TOE2(2)  <---------At4g35610          <---------WRKY18(1) --------->ARR11(3)     --------->ARR11(3)----------->GT1  <---------ARR11(3)           --------->WRKY12 --------->ARR14(2)<------ZmHOX2a(1)     <---------TOE2(3) --------->ARR11(3)        --------->ATHB12 <---------ARR11(3)==============HOX2a_HOX2a     --------->DAG2       <---------ANAC46  --------->WRKY38(1) --------->ARR10 <---------TOE1(3)<<<<<<<<<TBF1 ---------->DOF2      <---------LBD16<---------YAB1   gaagatcttcttcatgattaaggatggatctagttcttcttcttaggttaaaaagcagagagagcttctatggcggaagaagaatggtcattgactgtgt  9448800                       <----------DOF2       <-----------GT1            --------->ICU4         ---------->ID1 <----------DOF2                         <----------DOF2            *TSS       <---------DAG2    <----------DOF2                <---------ZAT6<-----------GT1          ---------->DOF2        <-----------RAV1(1)   --------------->AGL15  --------->ICU4      <--   gatactgttgagaaaagatgagaaactttttttttttgttgctcttttgactcttttttttttttagtaacttagtggaaattagtatttatcttttgtt  9448900                       --------->ANAC58                       --------->ANAC46          --------->HSFC1(2)          <---------HSFB2a(1)          --------->HSFB2a(1)          <---------HSFC1(2)          --------->ANAC58         <---------ARR14(2)           --------->ANAC58                --------->ANAC46         --------->GLK1(2)           --------->DAG2                   --------->ANAC58         --------->ARR14(2)         ---------->DOF2                   --------->ANAC58         <-----------ARR10     <---------MYB52(1)                 <-----------GT1         <---------ARR11(3)   <-------GAMYB                  <---------ARR14(2)         --------->ARR11(3)------>NtERF2                     --------->ARR14(2)        <---------GLK1(2) <---------ALFIN1                   <---------ARR11(3)   <---------ZAT18    ---------->DOF2    --------->ANAC58                     <------ZmHOX2a(1)     --------->ZAT18 <-- -------LBD16        --------->MYB52(1)               --------->At4g35610    --------->ZAT14    <----   tggggaaaaagaatcttcttacaaaacgacaccgttggaaaagcaagtctgagagaagcagaggatatatacaagtcagtctagtctactactacatgtt  9449000                                                   <---------CCA1(1)                                                   <---------RVE1(1)                                                  <---------GLK1(2)                                                  <---------ARR11(3)                                           <---------ANAC58                                      <---------DAG2      <-----------GT1    <------MYB83                                      <----------DOF2<---------AHL20(2)      <------MYB46(1)          ---------->DOF2  --------->DAG2  <---------ANAC46      <---------ANAC58    ---------->DOF2       ---------->DOF2  <---------ANAC58      <---------ANAC58 -------YAB1--------->ANAC58       --------->ZAT6 --------->ARR11(3)     --------->ATHB12 -------GT1 --------->ANAC58  <------ZmHOX2a(1) ----------->ARR10<---------ANAC46      ---------->DOF2   acaattgaaagggaaagctaatttttcaaaaaggataacacttttgggtgaagatttttttttcatttcttgtattgataggtttgcctaaaatcagaca  9449100                                            --------->YAB1                                        <---------AHL20(2)                                        --------->AHL20(2)                        --------->ZAT6 <---------AHL20(2)                   <----------DOF2     --------->AHL20(2)    ------>ZmHOX2a(1)               <---------GLK1(2) ------->TEIL      --------->AHL20(2)                              <-             --------->ICU4   --------->ANAC55(2)  <---------AHL20(2)                           -----             <---------YAB1   <---------ANAC55(2) <---------AHL20(2)                 <---------ANAC46           --------->YAB1    <---------TOE2(3)    --------->AHL20(2)--------->ARR11(3)         <-----   tggaattttagaaccatgattctttaactctaacgtatcaatttaatcaaaattaaattcttcctctattgatattgatataatgtgacttaaatgggat  9449200                        <------MYB46(1)                        ----------->GT1                       <---------MYB46(3)                      <---------ANAC46                      <---------ANAC58                    <------MYB83                    --------->MYB55(2)                    <------MYB46(1)                    <---------MYB46(3)                  <--------P                 <---------ANAC58                 <-------GAMYB                                                                   ----                 <---------ANAC58                                                           <--------                <---------MYB46(3)                                                          ---------                --------->MYB52(2)                                                       <---------AHL20(1)                --------->MYB55(2)           --------->ANAC46                            --------->AHL20(1)                --------->ATHB12         --------->YAB1                                  --------->AHL20(2)                <---------DEAR3(2)       <---------ICU4                                <---------AHL20(1)                <------MYB46(1)         --------->ICU4                                 --------->AHL20(1)                <------MYB83  --------->AHL20(2)                                       <---------ARR11(3)     <---------AtLEC2 <---------ANAC58  <---------YAB1                         <----------ID1    <--- ---------DOF2 <---------AtMYB61      --------->YAB1                         ---------->DOF2<-------- ---->GLK1(2)  --------->MYB111(1) --------->YAB1                      ---------->DOF2 --------->ARR11(3) ----GLK1(2)  <--------P<------MYB83  <---------ICU4             ----------->GT1      --------->YAB1   tctttttgtatgaaaggttggttggctggtaataaactaataataataagtcacaagagttttgaacttgttataaagaaaaagacaaaaatattttatt  9449300  Previous    Next  AGI:  At1g27190.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. Identical to Probable inactive receptor kinase At1g27190 precursor [Arabidopsis Thaliana] (GB:O04567;GB:Q0WPX0); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G69990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14859.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); Range:  from: 9446644    to: 9448812    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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