Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------ALFIN1                                                          --------->PCF2                                                     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)                                                    --------->CCA1(2)                                                   --------->AGP1                                                   <---------AGP1                                                   <---------ARR11(3)              <---------ANAC58                                                   <-----------ARR10   --------->ANAC46                                                   --------->ARR14(2)  --------->ANAC55(2)                                        --------->GLK1(1)<-----------HVH21         <---------ANAC58         <------MYB46(1)         ==========================HOX2a_HOX2a <---------ANAC55(2)         <------MYB83            ===========================HOX2a_HOX2a--------->ANAC58   <----------DOF2               <------ZmHOX2a(1) <---------ARR14(2)  --------->ANAC58 -------ATHB12             <---------ZAT14         --------->ARR11(3)<-----------GT1              ---   atcaactttgtaggtgagagattggaggctacagaggaagagaaatcgagcaagatctatgtcccaccatgttacgaaaccatttgctcgttctcactta  9427400                                                                                               ------                                                                                               <-----                                                       <-------TEIL   --------->ANAC58        -------            <---------At4g35610        --------->GLK1(2)              --------->ANAC58        <------         <------MYB83          <---------ZAT18     <---------------AtSPL8 ---------->DOF2     <------         <------MYB46(1)       --------->ZAT18  <---------LBD16       --------->ANAC46<----------DOF2     <---------MYB46(3)   <---------MYB52(1)<-----------RAV1(1)      --------->SPL7 XXXXXXXXXXXXXXXXX     <-----------RAV1(1) <----------DOF2  <----------DOF2          <---------SPL7<----------DOF2  <------ZmHOX2a(1)   ------->TEIL     <---------ARR11(3)      <-----------GT1<---------ARR11(3) ------->DOF2  <---------At4g35610     --------->ARR11(3)   <---------ARR11(3)--------->ARR11(3)    -   aaaaggattgttggtgctgcttcgaacctttagttcacaaaaatctttgttggggagtacatgattttccgaacgccaaagagctttgcttcaacgaata  9427500          --------->AHL20(2)          <---------AHL20(2)        --------->CCA1(2)                                                       <---------ZAT18       <---------ARR11(3)                                                       --------->ZAT18       --------->ARR11(3)                                                       <---------ZAT14 --->KAN4(1)                                                                    --------->ZAT14 ----KAN4(1)           <---------YAB1                 --------->REM1(2)      <---------ANAC58 -->ARR14(2)        <---------YAB1 <---------ICU4  <---------ANAC46          <---------ANAC46 ---KAN4(2)         <---------AHL20(2)             <---------ANAC58          <---------ANAC58-------- ---ARR14(2)        --------->AHL20(2)             <---------ANAC58  ---------->ID1          <------- XXXX>MIR828     <----------DOF2--------->YAB1     <---------ANAC55(1)  ------>ZmHOX2a(1)    <------- --------->DOF2  ------>ZmHOX2a(1)--------->ICU4<---------MYB52(1)  <-----------GT1          <-------   ttcaaagaagatttaaatcctttttattagagaataataatgtattctctgtttcgtgtagaaagttttttttcctcttgagtgcacaacaagttatgtg  9427600  --------->ARR14(2)  <---------ARR14(2)  ------->TEIL               <-------TEIL ->ANAC55(2)             <---------TOE1(2)              <---------ANAC46 --ANAC55(2)            --------->ANAC55(2)             <---------O2      ------>NtERF2 --ANAC55(1)        <-----------HVH21                   --------->O2    <---------ANAC58         <--- --ANAC46      <-----------GT1                       --------->ANAC46   <---------ANAC58       ------   tttgaatctgcaaaaatttactggtcacatgttcatgctcttatcaacgagaaacacgacgtctaattccacttgcctccctcattcactctcttctata  9427700           <---------DAG2                                                                      ------ ------AHL20(2)                                                                                ------ ----->TBP <----------DOF2       <-----------HVH21                                   <---------YAB1   taaacaaattccactttcttccctctcactcactctgtcatctataaacaaattccacttccctccctctcactcactcactctgttataaatgaaacct  9427800                                                                                  ----------->HVH21                                                                          <---------MYB46(3)                                                                       <------MYB83             <----                    <------ZmHOX2a(2)                                  <------MYB46(1)  <----------DOF2                   --------->AGP1                               --------->At4g35610     <---------DAG2                  --------->At4g35610                           <---------At4g35610     ============= --->TOE1(3)   <------ZmHOX2a(2)                             ---------->DOF2    <---------At4g35610 --->TOE2(3) <---------GLK1(1)                               xxxxxxxxxxxxxxx>smallRNA(le3) <---------   aaaaaaaaacttgagagatcagatcaacaaaaccaagagaaaacatggctcagaacgatacagtgaagctgataggttgttcggatgaccctttttccat  9427900                                                                   <---------LBD16                                                                =============================HOX2a_HOX2a                                                              --------->ARR11(3)                                                              <---------ARR11(3)                                                          --------->YAB1               <---------REM1(2)                    ----------->RAV1(2)        --------->ALFIN1                           --------->GLK1(2)    --------->O2                                   ------->TEIL ------>ZmHOX2a(2)    <---------O2<---------ALFIN1                  <---------ARR14(2)    <---------TGA1a                               --------->ARR11(3)                               --    --------->TGA1a                  <---------------AtSPL8 <---------YAB1                       <--- -----MYB52(1) <---------ZAT14 <---------------AtSPL8    --------->ICU4                      <------- =============bZIP_DOF     --------->WOX13(1)     --------->ARR14(2)                  ------>ZmHOX2a(1) --------AGL1  --------->ZAT14 <---------------AtSPL3    <---------YAB1 ---------->DOF2     <--------   taggccacgagtggctctacacttgaaatctatcaagtacgagtacttagaagaacctgatgatgatcttggggaaaagagccaactccttctcaaatct  9428000      --------->ANAC46   --------->ARR14(2)                                                                              ==   <---------ARR14(2)                                                                              -- ------->ZAT6            ------>ZmHOX2a(1)                                               ---------->ID1 --------GT1      ----------->RAV1(2)                                                <---------ANAC58 ----ARR10--------->ANAC58                                                           <---------ANAC58 -CCA1(2) --------->ANAC58    --------->YAB1     <-----------HVH21              <---------O2 --------   aaccctatccacaagaaaacccctgtcctcattcatggtgaccttgcaatctgtgagtccctcaacatcgttcaatacctcgacgaggcttggccttctg  9428100                                      --------->ZAT2                                      <---------At4g35610                                      --------->At4g35610                                      <---------ZAT2                                     <---------DEAR3(2)                                 <---------ANAC58                                 <---------ANAC58                              --------->TOE1(2)                             ------>ZmHOX2a(2)         ===========================HOX2a_HOX2a         ------>ZmHOX2a(1)   <---------ANAC58   --------->MYB46(3)        <---------ANAC58 ===============HOX2a_HOX2a--------->ARR11(3)                         ----------->GT1 ---->ZmHOX2a(2)          --------->YAB1    --------->ARR14(2)   ------>NtERF2   <---------ZAT14 --->RAV1(2)             <---------YAB1     <---------ARR14(2)  --------->ANAC46 --------->ZAT14   atccatccatccttccttctaatgcctatgatcgtgcgtctgctcggttctgggctcagtacatcgacgacaaggtaaaacagtttagagactcacttct  9428200                                                                                    <---------ANAC46                                                    <---------AHL20(2)              <---------ANAC55(2)                                               <---------YAB1                       --------->ANAC55(2)            <---------ANAC58                <---------MYB52(1)<---------TOE2(3)     <---------ANAC55(1)            <---------ANAC58     <----------DOF2 --------->YAB1           <---------ATHB12   acatgctctgttttgcttcttgtcaaagtttgatactttagtctctgttattaataaatctgtttagattagtcaaatcaagagttatgtgtctgaaaca  9428300  Previous    Next  AGI:  At1g27135.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10717.1) Range:  from: 9427151    to: 9427516    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g27140.1    Description:  ATGSTU14 (GLUTATHIONE S-TRANSFERASE 13); glutathione transferase. similar to ATGSTU13 (GLUTATHIONE S-TRANSFERASE 12), glutathione transferase [Arabidopsis thaliana] (TAIR:AT1G27130.1); similar to unknown [Populus trichocarpa] (GB:ABK95417.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like (InterPro:IPR010987); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, N-terminal (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal (InterPro:IPR004046) Range:  from: 9427845    to: 9428703    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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