Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                       <---------ICU4 <---------AHL20(1)                 >>>>>>>>>>GT-3b       ------   <----------DOF2    <---------AHL20(1)   <---------AHL20(2)         --------->ANAC46        ------- --O2                 --------->AHL20(1)   <-----------GT1            --------->ANAC58        <------ ->O2             --------->YAB1      <---------AHL20(2)              --------->ANAC58     <---------YAB1 --ZAT2          --------->AHL20(2)   --------->AHL20(2)        <------MYB46(1)      ---------->DOF2< ->ZAT2   <-----------GT1       --------->YAB1<---------DAG2    <------MYB83       ------->GAMYB----- --->RAV1(2)  <---------ICU4   <---------YAB1 <----------DOF2  --------->MYB59  --------->MYB52(1) <-   gctctctttatattactcattaaaaatattactatgataaaaaatttactttttgaacttggaatttggtccaagaaaaatataaccgaaagtataatta  9420800  --------->TOE2(3)  <-----------TGA1 <---------bZIP60(1)                                                         --------->YAB1 --------->bZIP60(1)                                                         <---------ICU4       <-- ----AHL20(2)                                                                -------->HAHB4       <-- --->AHL20(2)<---------MYB52(1)                                             <---------ATHB12   ------ -->ICU4    --------->At5g28300                                             --------->ICU4     <----- ---YAB1   ----------->GT1                                               --------->ICU4     --------- -----------STF1                                                         ------>ZmHOX2a(1)  <-------- ---->YAB1 <---------MYB46(3)                      --------->ANAC46------->TEIL  <---------At5g28300 ----------GT1 --------->MYB52(2)          <-------TEIL           <---------DOF5.7(2)    <---------TOE2(3)   ataacgtcattagcggttatttgtatactaatttggagttttgcatacattacacattacaccaatgtgaacgtcctaatgatcaccgtttaagtttgta  9420900                                 --------->ARR11(3)                              <---------TOE2(3)                             ---------->DOF2    --------->AHL20(2)                         ------->TEIL           <---------AHL20(2)       <-----------GT1<---------YAB1           <---------AHL20(2)         <---------TOE2(2) --------DOF2       --------->YAB1             <---------AHL20(1)      --------->ANAC58 -------DAG2        <---------ICU4     --------->At4g35610             --------->ANAC58 ---->ID1 <---------ANAC58  <---------AHL20(2) --------->AHL20(2)    <------ZmHOX2a(1)        ------- ------GT1<---------ANAC58  --------->AHL20(2) --------->AHL20(1)---------->DOF2        --------->ANAC58 ------>AtSPL8     <---------ATHB51<-----------HVH21           <---------YAB1           --------->ANAC58 -------AtSPL8     --------->ICU4<---------ARR11(3)    ---------->DOF2 <---------ANAC55(2) --------->WOX13(1)   cttttttttttgccgttcacaattatgaatttaaagatgtcaactaaaatttaatttcaaagcttataaaaggacgtaagtttattacacaaacaatcac  9421000                          --------->ANAC46                                                          <                        --------->ANAC46                                                       <-----                      <-----------GT1                                                         -------                    --------->YAB1                                                           <-------                   <---------YAB1                                  ----------->GT1     <---------YAB1              <---------ICU4                             <---------GLK1(2)            --------->AHL20(2)              <-----------GT1                            --------->ARR14(2)           <---------AHL20(2) -->YAB1  ------>ZmHOX2a(1)  ----------->GT1             <---------ARR14(2)      <---------MYB52(1) <   aaactctaattcctaataactattatacacatcgtgaatttgaaacatttttaagcgcaaattctcagcgagataaaaacgacgttgttttaatagttat  9421100                                ------>MYB83                                ------>MYB46(1)                              --------------->AGL15                              <---------MYB59                         <-------GAMYB                        <---------DEAR3(2)                        <---------MYB46(3)                     ------------>AtMYB77 <----------DOF2    --------->ANAC46 ---------ANAC58    --------->ANAC58 -------CBF         --------->ANAC58 -->ATHB12        <---------ALFIN1 --YAB1        <---------SPL7<-----------------AGL1             *TSS <----------DOF2 ---------ANAC58 <---------REM1(2)        <---------TOE2(3)     ---------->DOF2   tggctttacaacttcgtcgtacacgccggttaccaaatatcgctaaggctcagaattatctctgttcaaagcttttgttttgttcccaattctgaagttt  9421200                                                                                    --------------->AGL15                                                                                    -----------------                                                                                    <---------------AGL15                                                                                   ----------------->AG                                                                                   ----------------->AGL1                                                                                   <-----------------AG                 ---------->DOF2                                                   <-----------------AGL1        <---------ARR14(2)             <----------DOF2                            -------->P        --------->ARR14(2)          <---------ARR11(3)                         <---------ANAC58     <        <---------ARR11(3)      --------->ZAT6                                 <---------ANAC58  ----        --------->ARR11(3)   <----------DOF2       <<<<<<<<<TBF1       <----------DOF2           <---     --------->MYB46(3)  <-----------GT1      <---------GLK1(2)       <---------AtLEC2          <----   tgaatcaacaaatcttcaataaagttttctcctttcactatctttccatattcttcttcttagtaaaactttgcattaatggcttacccaaatttgtaag  9421300            <------------------------ANAC81         ------>ZmHOX2a(1) >AG <-----------GT1 ----------DOF2 ----->ARR11(3) ------ARR11(3)                                                          --------->ICU4 -----At4g35610    <---------YAB1                   <---------TOE1(2)    <---------ATHB12          <<   ctctttgtttcctcccttcttcttattctcttcttcattctccaaatttgtttctaggtttcttcagtttgagcaatgaagaagtctaaactcgataatt  9421400                                                                               ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)                                                                             --------->ARR11(3)                                                                             <---------ARR11(3)                                                                             --------->ARR14(2)          <-------TEIL                                                      <---------GLK1(1)         --------->ARR14(1)                                               --------->HSFB2a(2)        <---------GLK1(2)                                   =========================HOX2a_HOX2a    <        --------->ARR11(1)                                  ------>ZmHOX2a(1)<---------ARR14(2) <----        --------->ARR14(2)                                  ==========================HOX2a_HOX2a ---        <---------ARR14(2)      <---------YAB1       <-----------GT1      <---------HSFB2a(2) <------  <---------REM1(2) <---------ANAC58            <---------DAG2       --------->At4g35610      ------- <<<<<<<TBF1        <---------ANAC58            <----------DOF2 <---------AtLEC2     --------->YAB1 -   cttcttcacagattcgattcgggcttgttcagttcttattagttgttctgcttttttacttcctctgcatgagcttcgagatcccattcatcttcagaac  9421500                                                                            <---------MYB46(3)                                                                         <---------MYB46(3)                                                                        <---------AtMYB61          --------->LBD16                                               --------->ALFIN1        <---------LBD16                                               <------MYB46(1)      --------->ARR14(2)                                              <------MYB83      <---------SPL7                                                  <---------MYB46(3)      <---------PCF2                                                 <---------AtMYB61      <---------ARR14(2)                     --------->ANAC58      <-------GAMYB --------->ALFIN1                            --------->ANAC58     --------->MYB55(2)               <- ---------ARR14(2)                         <---------TGA2(2)      --------->MYB111(2)            <--- -----LBD16 <-----------HVH21             ----------->HVH21       <---------MYB46(3)             <--- ------>LBD16   <---------At4g35610       ----------->TGA1        --------->MYB111(1)   <---------At4g35610 ---ARR14(2)--------->ARR14(2)          --------->At4g35610      <--------P<---------AtMYB61     <--- -->ARR14(2)<---------ARR14(2)          <---------At4g35610    <---------MYB46(3)      --------->ANAC58 -------->ARR14(2)   <---------YAB1 <----------DOF2           <---------ATHB12         --------->ANAC58   cgggtctgggtccgggtctgatgatgtttcatcttcttcttttgctgacgcattaccgagaccaatggttgttggtggtggtagtagggaagctaattgg  9421600                                                           <---------At4g35610                                                           --------->At4g35610                                                           <---------ZAT2                                                        <-------TEIL                                                    <---------------AtSPL8                                                    <---------MYB46(3)                                                    <---------------AtSPL3                                                   <---------ANAC46                                                 --------->ARR14(2)                                                 <-----------HVH21         ----------->GT1                                                 <---------ARR14(2)       --------->At4g35610                                               --------->LBD16            <---------At4g35610    <------NtERF2                            <---------LBD16           --------->LBD16  --------->ETT(1)    --------->ARR14(2)     ------>ZmHOX2a(2)       <---------LBD16  <---------ANAC46    --------->PCF2        <------ZmHOX2a(2)        ----------------->AGL1 --------MYB46(3)     <---------ARR14(2)   <---------ARR14(2)       --------->MYB52(1) ------ANAC58     --------->At4g35610      --------->ARR11(3)    <-------GAMYB ------ANAC58>>>>>>>>>TBF1                 --------->GLK1(2)<---------GLK1(2) ----GAMYB>>>>>>>>>TBF1  <---------ALFIN1  --------->ARR14(2)    <-----------HVH21   gttgtcggagaagaagaagaagcagacccacatcgacatttcaaggatccgggtcgggtacagcttcggttaccggagcggaaaatgagggaatttaagt  9421700  Previous    Next  AGI:  At1g27120.1    Description:  galactosyltransferase family protein. similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G62620.1); similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G74800.1); similar to unknown [Populus trichocarpa] (GB:ABK95149.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79615.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40997.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Galectin, galactose-binding lectin; (InterPro:IPR001079); contains InterPro domain Glycosyl transferase, family 31; (I Range:  from: 9421164    to: 9424056    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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