Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->LBD16                                                                                     --------->ANAC58                                                                                     --------->RAP2.6(2)                                                                                 --------->MYB46(3) >HAHB4                                                                        --------->ANAC58 --ICU4                                                           <---------AHL20(2) --------->ANAC58 ->ATHB51                                                        <---------AHL20(2)  ------->GAMYB -ATHB1                                                          --------->AHL20(2) --------->MYB46(3) -ATHB51                                                        <---------WOX13(1) -------->P >AHL20(2)            <---------MYB46(3)               <---------MYB46(3)  --------->ANAC46 -AHL20(2)   <---------AHL20(2)                      <---------MYB52(1)    --------->ANAC58 >ICU4      --------->AHL20(2)             ----------->GT1    --------->ATHB12 --------->ANAC58  <--- -ATHB12 <----------DOF2                  ----------->GT1    <---------YAB1--------->ANAC58      <---   gtggaaatgagcttttaaattcagtggttttgaacggtttagaaaggtttaaaacgtttgtttatgattaattttaaacgctagcaaccgcaaatacaac  9417100            <---------At4g35610                                                   --------->TOE1(3)            <---------LBD16                                                       --------->TOE2(3)          <---------DEAR3(1)                                                     --------->ZAT6       <---------MYB46(3)                                                 --------->MYB59      --------->ALFIN1                                               <---------AHL20(1)   --------->LBD16                                                   <---------AHL20(2)   <---------MYB46(3)                                                --------->AHL20(2)  <---------ANAC58              --------->TOE2(3)                    --------->AHL20(1)  <---------ANAC46        --------->YAB1                         <---------AHL20(2)                --  <---------ANAC58     --------->WOX13(1)                        --------->AHL20(1)              ---- <---------LBD16    --------->GLK1(2)                            <---------AHL20(1)             <---- -------DOF2--------->At4g35610 --------->TOE1(3)                --------->AHL20(2)   ---------->DOF2 ------DAG2 <------NtERF2<---------ATHB12                    <---------YAB1     -------->P  <-------TEIL   ttttgcgggtgggcagcggaagaatcaatcaaacccttaaaaactattgtctcttaacccattctaattaattaattaggctaaccctaaaagatgcatt  9417200                                     --------->GLK1(1)                                  --------->CCA1(2)                       ------>ZmHOX2a(2)     <---------MYB46(3)                         --------->GLK1(1)                     <---------AGP1  <---------CCA1(2)                                 --------->ARR14(2)                <---------AtLEC2    <---------ARR14(2)                                 <---------ARR14(2)     <---------DAG2  ------->TEIL   --------->ARR14(2)                                 --------->ARR11(1)     <----------DOF2 --------->ARR11(3)      ----------->GT1                           <---------ARR11(3) ------------->AtSPL8<---------ARR11(3)     <---------ATHB12                           --------->ARR11(3) ----->YAB1 <---------At4g35610  <---------ANAC46                                  ---------->DOF2<-- ---TEIL    --------->At4g35610  ----------->GT1                         --------->AHL20(2)       <--   catggtactttttcatctgcatggatctattagtatcgtatatccaatggttaaaagaataaatgagaaggcaaatgaaataaccaaaagatatgcatta  9417300                     --------->ANAC46                     --------->ANAC58                     --------->ANAC55(1)                     --------->ANAC55(2)                     --------->ANAC58                    <---------LBD16           --------->TOE1(3)           <---------DAG2                                           <---------ATERF1(1)           --------->TOE2(3)                                        ------>NtERF2       <---------WRKY38(1)                --------->AtLEC2      --------->ANAC46               >>>>>>      --------->WRKY18(1)     --------->YAB1 ------->TEIL       <---------O2           --------->LBD16 -------MYB46(2)  --------->ARR14(2)  -------->P       <---------bZIP60(2)            --------->LBD16 -------MYB111(2) <---------ARR14(2) <-----------GT1----------->HVH21                <---------HSFB2a(2)   actacctagtcaaccttatgtatacggaagaaagataacttaccatgcatttcaatgacatggtacacgaggcctccattgttcaatcccgaaggaaaac  9417400                                                                  --------------->AGL15                                                                  <----------DOF2                                                                  <---------------AGL15                                                                 <-----------------AGL3                                                                 ----------------->AGL2                                              <---------AHL20(2) ----------------->AGL3              ----------->HVH21              --------->ICU4      <-----------------AG            --------->CCA1(2)                --------->AHL20(2)  <-----------------AGL1           --------->ARR14(2)           <---------ANAC46         <-----------------AGL2  <---------AHL20(2)                 <---------MYB52(1)     --------->ATHB12  --------->AHL20(2)            --------->ARR14(2)          <---------ICU4                 *TSS --------->AHL20(2)             <---------ARR14(2)         --------->ICU4      <------ZmHOX2a(1) >>>MYB2   <---------ARR14(2)  <------ZmHOX2a(1)  <---------AHL20(2)          --------->ICU4 --------   caaaaaaattttggatatgaccgaaacttgagaggacccgttgagtatttattaacttagaatgatttctttttttggtaaggattaacttagaatgata  9417500                                                                                                -----                 --------->AHL20(2)                                                             <----               <-----------TBP                                                               <-------               <---------CCA1(2)                                                           <---------AHL20(2)            <------NtERF2                                                                 --------->AHL20(2)           --------->RAP2.6(2)                                                           <---------YAB1          <---------RAP2.6(2)     --------->ICU4                                      --------->ICU4         <------NtERF2  <---------ANAC58                                         --------->ANAC55(2)         --------->ATERF1(1)   ---------->DOF2                                   <---------ANAC58        <---------ATERF1(1) <---------HSFB2a(2)                                  <---------ANAC46       --------->ALFIN1 <---------ANAC58                                         <---------ANAC58 --- <---------ATHB12<-----------TBP ----------->GT1            <------------CBF     <---------ANAC55(2) ->YAB1<---------RAP2.6(2)  --------->HSFB2a(2)<------ZmHOX2a(1)             <------------CBF--------   caaatgaaggtggccgcatatatatagcttatggaaagtattaatcgaaggagctatattcaaattgcatttcattagaaattgcgtaagtattatatat  9417600                  <---------ARR14(2)           --------->AHL20(2)        <---------TOE2(1)                      --------->ARR11(3)        <---------TOE1(1)                      <---------AHL20(1)       --------->SPL7                          --------->AHL20(1)     --------->TOE1(2)                         <---------ARR11(3)     <---------SPL7            <---------RVE1(1)     --------->TOE2(2)         <---------CCA1(1)   <---------------AtSPL8     --------->ARR11(3)                        <---------AHL20(2)   --------------->AtSPL3     <---------ARR11(3)                    --------->AHL20(2) ---->AHL20(2)    --------->ARR11(3)           <---------AHL20(2)   <---------AHL20(2)         <----- -----AHL20(2)   <---------CCA1(2)            --------->AHL20(2)  <---------AHL20(2)         <------- --AHL20(1)     --------->ARR11(3)     <---------WOX13(1)         --------->AHL20(2)  ----------->GT1 ------>YAB1    <---------ARR11(3)   --------->ATHB12           --------->AHL20(2)>>>>>>>>>TBF1<----- ->AHL20(1)     <---------AHL20(1)  <---------YAB1       <---------CCA1(2) ---------->DOF2   <-------   taataaacgtacgacgaatatatctggactcagatattttgattgcaaatatattccctatatcatatatatatataaaaagaagaagaagtaaattact  9417700       --------->ARR14(2)       <---------ARR14(2)    --------->ANAC58    --------->ANAC46    --------->ANAC58                           --------->ANAC58  --------->MYB52(1)                           --------->ANAC58 ----ANAC58             --------->ANAC46     ---------->DOF2               --------->ARR11(3) ----GT1           ------>ZmHOX2a(1)      --------->ANAC58            <---------TOE2(2) ----ANAC58      <---------ICU4           --------->ANAC58    <---------ALFIN1 --AHL20(2)    ------->TEIL             ---------->DOF2      <---------At4g35610             <-------   tgccaaacggaaccatgaatccttacacactatccaaaattccaaagcaaagccatctaatccagcacatcatatgttatcttgagttccaatcccttta  9417800                                                                           --------->YAB1                                                                          <<<<<<<<<ARR1                                                                          <---------ATHB12                                                                          <<<<<<<<<ARR2                                                                      <-------TEIL                                                                     --------->CCA1(2)                                             <----------DOF2      --------->MYB59                                            <---------DAG2    <---------YAB1   --------->ANAC58                         --------->TOE2(3)<---------TOE2(3)    <---------ANAC58  -   --------->ANAC58                       ------->TEIL     <---------AHL20(2)     <---------ANAC55(2)   --------->ANAC46       --------->YAB1 <-----------GT1  --------->AHL20(2)      <---------ANAC58--- ---DOF2     <---------ICU4 <---------YAB1-------->P      <---------AHL20(2)    <-----------GT1<-----   gaaacaaggaactattcatttcattcaattacaattagtttatcaaccttttatttgtaattttatgttagatacaatcatattacgttgcacatatata  9417900                                                                                          <---------ICU4                                                                                          <---------AHL20(2)                                                                                       <--------HAHB4                                                                                       --------->ATHB51                                                       --------------->AGL15           <---------ICU4                                                       <---------------AGL15           --------->YAB1                                          --------------->AGL15              <---------AHL20(1)                                          <---------------AGL15           --------->AHL20(1)                                          <----------DOF2                 <---------AHL20(2)                                          --------->TOE2(3)               <---------AHL20(1)                                          --------->TOE1(3)               --------->AHL20(2)<--------                       --------->ZAT6    ==============================MADS_MADS      --------->ICU4                      <---------YAB1     <-----------------AGL3        --------->AHL20(2)<---------YAB1 ---------->GT1      <-----------GT1     ----------------->AGL3        --------->YAB1 --------->AHL20(2) ------->DOF2  --------->YAB1----------->GT1--------->AHL20(2) <-------GAMYB --------->AHL20(2)   <-- ----AHL20(2) <------ZmHOX2a(2)     ----------->GT1   ----------------->AGL3 <---------AHL20(2) <----   aaaagaaaattatacgatcatattatcactcttgtaaattgtaactttaaatagttgctaaattcagttggaataatattttatttgaataattaatgct  9418000  Previous    Next  AGI:  At1g27110.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT1G27150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41008.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR2 (InterPro:IPR013105) Range:  from: 9412807    to: 9417491    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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