Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                              <------ZmHOX2a(2)                                                                                              -------                                                                                             --------            --------->AtLEC2                              <-----------GT1                    <-------       <-----------GT1                                 --------->YAB1                        --------      ------->GAMYB                                <---------AHL20(2)             ----------->GT1 <--     <---------MYB52(2)          ----------->GT1  --------->AHL20(1)          --------->YAB1 <-------    <---------At4g35610      <---------AHL20(2)   <---------AHL20(1)      --------->TOE2(3)  --------    --------->At4g35610     --------->AHL20(2)   <---------AHL20(2) <----------DOF2         ---------   ctattcaactcaccattcaaataagacattttaaattgtcaataaacttatatatatttataacattacactttaacctctaataagtgaaacgagatcc  9400300 -----ALFIN1 -->CCA1(2) ->ARR14(2) --ARR14(2)                                                                              <---------At4g35610 ->ARR11(3)                                                                           ------>ZmHOX2a(1) -------ALFIN1                                                                   --------->YAB1 --ARR11(3)                       <----------DOF2                    --------->AHL20(2)  --------->At4g35610 ->AGP1               ---------->DOF2                  ------------>CBF         <---------ATHB12 >GLK1(1)     --------->YAB1   <-----------GT1     <----------DOF2   ----------->TBP --------->TOE2(3)   acacttatatgtgtaataacaagggaaagagaataactttcttctctcgctctctttctcaatctgtgtctataaataagaaatcatcctcatcttccag  9400400               <---------ANAC46               --------->ALFIN1             <---------ANAC46             --------->ALFIN1           <---------ANAC58            <---------AHL20(2)               --------->ANAC58           <---------O2  <---------ZAT18               --------->ANAC58 --------->ANAC46           <---------TGA1a             <---------AHL20(1)             ---------->DOF2           <---------bZIP60(2)         --------->AHL20(1)         --------->MYB46(3)           <---------ANAC55(1)         --------->AHL20(2)        --------->ANAC58           <---------ANAC46            --------->ARR11(3)        --------->ANAC58   <---------AHL20(1)           <---------ANAC58--------->TOE2(3)           --------->ANAC46 --------->ANAC58     <-------  --------->DAG2         --------->ZAT18 <------------CBF        --------->ANAC46   --------->AHL20(1) ====================bZIP_DOF    --------->YAB1        --------->ANAC58--------->DAG2      ------>ZmHOX2a(1) ---------->DOF2    <---------ARR14(2) <---------ARR11(3) --------->AtMYB61         <---------ARR11(3)   ttgaaaagttgtgccgtgtgtggatagtgccttagtcagaatatattgtttctgatcacaccattccacccaaaaagcaacttcaaaatattcctgtata  9400500                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    <                                                                               --------->ARR11(3)   <         <---------TOE2(3)          ------------>CBF                     <---------HSFB2a(2)        <     <----------DOF2      >>>>>>>>>TBF1                                  --------->HSFB2a(2)       -- --CCA1(2) <------------CBF----------->GT1                <---------AHL20(2)   <---------ARR11(3) <--   ttctaaactttgagattgttcataagaagaagaaaaaacacaattcatcttcttagtcattttttttggttttttttagaacatcttcttcatcttgttg  9400600           <---------DAG2          --------->HSFB2a(1)          <---------HSFB2a(1)         ------->TEIL ---------ANAC55(1)                         <------NtERF2 -------->ANAC55(2)                        --------->LBD16 ---------ANAC55(2)                       <---------ANAC46       ----------->GT1 ---------ANAC58                          --------->ETT(1)     <---------ARR14(2) ---------ANAC46                    <---------MYB46(3)         --------->ARR14(2) ---------ANAC58       <---------DAG2<-------GAMYB   <-------GAMYB----------->GT1 ------->MYB52(2)      <----------DOF2   <---------LBD16       --------->GLK1(2) ---------GT1      <---------CCA1(2)<---------DEAR3(1) <---------MYB46(3)   ttacttgttcgaacctttcccatagctttttctcatcgtcgttgccggagatgggagttgttgagaatcggaaaattttgccagagaaaaaacttggagg  9400700                         <---------KAN4(2)                                         <---------YAB1                     <---------TOE1(2)                                           <--------HAHB4                     <---------TOE2(2)                    <---------TOE2(3)      <---------ICU4                    ------>ZmHOX2a(1)                    <---------ICU4          -------->ATHB1                   --------->TOE2(2)                     --------->YAB1          --------->ATHB51              <-------TEIL                              <---------ATHB51        --------->ICU4           <---------ANAC46                 <---------ANAC58         ================================           <---------ANAC58                 <---------ANAC58         --------------->AGL15           <---------ANAC58        <----------DOF2      <---------ATHB12        <---------YAB1     --        <---------MYB52(1)     <----------DOF2<---------MYB52(1)     <----------DOF2 <-----------GT1   ctggagagccattacgttcatcctaggtatgttctttctttccatttcgtttcttccaataatgtttttttctttgaagagaattattaatcttccattt  9400800                                           ----------->GT1                                    --------------->AGL15                                   >>>>>>>>>RAP2.2                                                  -                                 <---------ARR11(3)                                                 <                                <---------CCA1(2)                                                   -                               <---------AHL20(1)                                                <---                               --------->AHL20(1)                                               -----                               <---------ARR11(3)                                               -----                               --------->ARR11(3)                                               -----                            --------->AHL20(2)        <---------AHL20(2)           <-----------GT1 --        <-------TEIL      --------->AHL20(2)         --------->AHL20(2)        ------->TEIL <-------- ===================================================MADS_MADS               --------->AtLEC2<-------- ------->TOE2(3)    --------->AtLEC2<---------------AGL15              <-----------GT1   <---------ATHB51   gcctcaaatattcatatggtccattcaaaaaaatatatctaaacatggtaaactattaaatgaatagccattttagccatgcatttaacaaattatggtg  9400900    ----------->RAV1(1)    <---------ALFIN1  ------>MYB46(1)  ------>MYB83 --------->ORA47(1) -------->MYB46(3)                              <-----------RAV1(1) ---------MYB59                           --------->ANAC55(2) -------->DEAR3(1)                        <------MYB83<---------ANAC58 ------WRKY18(1)                          <---------ANAC55(2) ---->WRKY12                              <------MYB46(1) ---->ETT(2)                             --------->MYB111(1)   <-----------GT1 ---->WRKY38(1)                          --------->MYB59----------->GT1 ------->DEAR3(2)                    --------->YAB1   <---------ANAC46                  <---------ZAT18 -YAB1              <---------TOE1(3)--------->ATHB12 <---------ANAC58                <-------------- ---RAV1(1)     <----------DOF2     <---------YAB1---------->ID1     <----------DOF2  <--------------   gaccgaccacattgatgcctttcaggttctatcgatttatgattaggtatttgttgtcttgtaattcacatctttgtttgttttagatagagtacttaca  9401000                                                                                              -------                                                                          --------->YAB1    ---------                                                                       ---------->DOF2     --------->YAB1                                                                     >>>>>>>>>RAP2.2      <---------ATHB12                       --------->ANAC58                            <---------ARR11(3)   --------->WOX13(1)                       --------->ANAC46                      <---------ANAC58    --------->MYB52(1) -AtSPL3               --------->ANAC58      --------------->AGL15 --------->ARR11(3) --------->WRKY18(1) -AtSPL8           --------->ARR11(3)     <-----------GT1    <---------ANAC58  --------->MYB46(3)   caatatgacattttcttgaaatatcaccccaaaaaaaacacatttttcttcatatatcaattttcttgatatctaaagataacaaacagtcaatcaaagt  9401100                                                                                                <----                                                                                               ------                                                                                               ------        <-------TEIL                                                                   ------>ZmHOX2a(1)     --------->CCA1(2)                                                                <---------MYB59    --------->AHL20(1)                         --------->YAB1        <---------bZIP60(1)       ------    --------->ARR11(3)                       <---------WOX13(1) --------->CCA1(2)    ----------------    <---------ARR11(3)                     --------->ATHB12--------->YAB1         <----------DOF2   <   --------->AHL20(2)                     <---------AHL20(2)  --------->YAB1   <-----------GT1 ------ --------->AHL20(2)     <---------GLK1(2) <---------YAB1 ------>MYB46(1)   <---------DAG2      <----- ---->GT1     --------->YAB1        <---------AHL20(2)   ------>MYB83--------->bZIP60(1)      <------ ->DOF2<-----------GT1<---------YAB1--------->AHL20(2) --------->TOE1(2)   <----------DOF2   <-------   taaaaatatatacgtttcataactatgattctctaaatttaaatttcattgacaatacctacaatgatatgccatcacttttttctttcctaatcggtag  9401200  Previous    Next  AGI:  At1g27080.1    Description:  transporter. similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT1G69870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41020.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 9400651    to: 9403776    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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