Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          <-------TEIL                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       ---------->DOF2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)     --------->At5g28300                            <xxxxxxxxxxxxxxxxsmallRNA(i)            <--------     <------NtERF2                             --------->At4g35610   --------->ANAC58       ---------     <---------------------WRI1                <---------ZAT2  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <---------DEAR3(1)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <------ZmHOX2a(1)   <---------DREB2C(2)      ---------->DOF2    <---------At4g35610   --------->ANAC58       ---------   <---------ANAC46      --------->AtLEC2     --------->MYB52(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------YAB1 ------>MYB52(1)------>ZmHOX2a(1) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -->GLK1(2)   ----------->RAV1(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  ---------->DOF2   xxxxxxxxxxx   taatggcggtgatacatcctgagagaaatgcaaagaagaaactcaagttagctgcaaagaacaaggctaacaagaaaagaaggattatgagcaataaaat  9373500                                                                      <---------AHL20(2)                                                                   --------->YAB1                                                                   -------->ATHB1                                                                   <---------ICU4                                                                  --------->ICU4                  --- -AHL20(2)                           <-----------GT1              <---------ATHB51               ---- -AHL20(1)         --------->At4g35610                            --------->AHL20(2)       <---------TOE1(3) >AHL20(1)         <---------At4g35610                   <---------YAB1     <---------TOE2(3)<------- >AHL20(2)<---------ALFIN1       --------->TOE2(3)  <---------YAB1<---------AHL20(2) <----------DOF2 xxxxxxxxxxx>smallRNA(si3)    ------->GAMYB        <---------TOE2(3) <---------YAB1  <---------DAG2 <   ggatagatggtcacactcttaagctcccataaccacattaaaccatttttgtttatgttaacatagaaattattatttgagattagactttttcaggtat  9373600                                               <-----------GT1                        <xxxxxxxxxxxxxxxxxsmallRNA(fl3)    ----------------->AGL3                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    xxxxxxxxxxxxxxxx>smallRNA(i)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <-----------------AGL3           --------->ATHB12    ----------------->AGL2      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <-----------------AGL2     xxxxxxxxxxxxxxxx>smallRNA(i) --------->At4g35610    ------>ZmHOX2a(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                    ---- ------>YAB1           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------At4g35610  <---------AHL20(2) ----->ICU4      <-------GAMYB<xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                  --------->AHL20(2) --MYB52(1)     <---------MYB46(3) <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <---------ETT(1) <---------ANAC55(2) ---------YAB1  ----------->GT1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)--------->AHL20(2)<---------AHL20(2)   ttatgatccatttttggtctgttacaatccaattctaaaccattgcatttaacttgtttcttagcagaaaaaaattccgacatttatttgattacataaa  9373700                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    <                          --------->ATHB12                                                         >>                          --------->YAB1                                                           <<                          <---------ICU4                                 ----------->GT1           <-                         <---------YAB1                                  ============================                         --------->ICU4                             --------->ANAC55(2)            <-                       --------->YAB1                               <---------ANAC55(1)            --                       <---------ICU4               <---------ARR11(3)   <-------GAMYB             --                   --------->AHL20(2)               <---------GLK1(2)   <---------MYB46(3)         <-                   <---------AHL20(1)         <-----------GT1       <---------ANAC58               --                   <---------AHL20(2)    --------->AHL20(2)         <---------ANAC46               --                   --------->AHL20(1)   --------->ARR11(3)          <---------ANAC55(2)            <-             <----------DOF2            --------->AHL20(1)          <---------ANAC58           <-----     ----------->GT1  --------->ICU4    <---------ARR11(3)        <---------TGA2(2)  ---------->DOF2- ---------->DOF2  --------->AHL20(2)    <---------AHL20(1)    <---------YAB1         ================ ----->TOE2(3)    <---------AHL20(2) --------->AHL20(2) <---------YAB1  ----------->GT1        ------   cttaaaagagataaactttattaaattatgattactaaaaaaaatatttaacaagattatcaatatgattacgtctgttaaaaacaaaaaaggaatttgc  9373800      <------NtERF2     ----------->RAV1(1)     ------>NtERF2    <---------bZIP60(1)    --------->bZIP60(1)   <------NtERF2 --------->ALFIN1 -------MYC4 ------>MYC2 ------>MYC4 ------>MYC3 -------MYC3 -------MYC2 -------PIF5 >>>>>>>>HY5 <<<<<<<<HY5 --------bZIP60(2)--------->ANAC46                <---------ANAC58 ========MYC_MYB  --------->ANAC55(1)        <---------O2 --------TGA1a    --------->ANAC55(2)        --------->O2 ------->bZIP60(2)<---------ANAC55(1)        <---------bZIP60(2) ------->PIF3(3)  <---------ANAC55(2)        --------->ALFIN1            <---------MYB46(3) --------PIF3(3)  <---------ANAC46      --------->LBD16                  ----------->GT1 ------->O2       --------->ANAC58     --------->DEAR3(1)    ------>NtERF2                       <--- ------->TGA1a    <---------ANAC58    <---------LBD16        <------NtERF2<-------GAMYB          ---- --------O2       <---------ANAC58 --------->MYB46(3)        --------->LBD16              <---------HSFB2a(2) -----------PIF3(2)              --------->WOX13(1)         --------->DEAR3(1)  <------------CBF <--- ------>PIF5    <-----------GT1------------>CBF   <---------ANAC58      <---------DEAR3(1)--------->HSFB2a(2) ========bZIP_DOF --------->ANAC58 <---------ATHB12<----------DOF2      <---------RAP2.6(2)      ---- ----------->PIF3(1)   --------->ICU4--------->MYB52(1)  --------->ANAC46<---------DEAR3(2)   -------   cacgtggcgacactaaaattacgtaatgttcaagtcaatcaccggcgatgtggcttttctcgccgcgagttgaggcggttgaaattgagtttcgagacga  9373900                          <-------MYC2        --------->ANAC58  <-------MYC3        --------->ANAC46  ------->MYC3        --------->ANAC58  ------->MYC2                                                  <---------AHL20(2) <---------DEAR3(2)      ----------->GT1                                                --------->AHL20(2) ------bZIP60(1)--------->ZAT18                                                        <---------AHL20(2) ----->O2    *TSS       <---------TOE1(2)                                        --------->TOE2(3) ------O2 --------->AHL20(2)                      >>>>>>>>>>GT-3b                <---------MYB59 ----->bZIP60(1)<---------ZAT18               --------->YAB1                    <---------ANAC55(2) ---->HVH21  <------------CBF       --------->AHL20(2)               ---------->ID1    --------->AHL20(2)   cgtcgtttccaagtaaattgcactagcacgtttaaaaaaaaaatgcaataagaaaaataaaccatgagttcgtcttcttaatacctaaattaaattcgat  9374000                                <---------ANAC46                                ----------->GT1                               <------NtERF2                             <---------DEAR3(1)                             <---------ANAC46                            <---------ABI4(1)                            <------NtERF2                            --------->ATERF1(1)                           ------>NtERF2                           <---------ATERF1(1)                           <---------ERF1                           <---------RAP2.6(1)                           <---------RAP2.3(1)                           <---------ORA47(2)                           <---------DEAR4(2)                           <---------RRTF1(1)                          <---------DEAR3(1)                          <---------ATERF1(2)                          --------->DEAR3(1)                          <---------RRTF1(3)                          --------->ATERF1(2)                          <---------RRTF1(2)                          <---------RAP2.3(3)                          <---------RAP2.3(2)                          <---------RAP2.6(2)                         <------NtERF2                         <---------ABI4(1)                         <---------At4g35610                                           <----------DOF2                         --------->At4g35610                                          ------>ZmHOX2a(2)                         --------->ATERF1(1)                                         <------ZmHOX2a(2)                        <---------ORA47(2)                                          <---------ARR14(2)                        <---------ERF1                                              --------->ARR14(3)                        <---------ATERF1(1)                                         <---------ARR11(3)                        <---------DEAR3(2)                                          <---------ARR14(3)                        ------>NtERF2                                               --------->ARR14(2)                        <---------RRTF1(1)                                          --------->ARR11(3)                        <---------RAP2.3(1)                                         --------->GLK1(2)                       <---------At1g77200                                <---------ANAC58                       <---------RAP2.3(3)                                <---------ANAC58                       <---------DREB2C(2)                           --------->ZAT2 <-----------ARR10                       <---------DEAR3(1)                          <------NtERF2   <------ZmHOX2a(1)                      <------NtERF2                               --------->LBD16  <---------GLK1(2)<      ---------->DOF2 --------->ATERF1(1)                         <------NtERF2  --------->LBD16   --  <----------ID1     <-----------HVH21        <------NtERF2     <---------LBD16 <---------LBD16  <---   ttttgagacaaagctcgacaagtcgtcggcggcggtgtaaaaatagtcggagctatggcgatgcaggccggagttggcttatccaggatctttctcttag  9374100                                                                                 ------>ZmHOX2a(1)                                                                               ----------->RAV1(2)                                                                              ------>ZmHOX2a(1)                                                                          <---------ARR14(2)                                                                          --------->ARR14(2)                                                                          <---------ARR11(3)                                                                          --------->ARR11(3)                                                                         <---------GLK1(1)                                                                         <---------CCA1(2)                                                                    =================HOX2a_HOX2a                                                                    ------>ZmHOX2a(2)           <---------ZAT14                                          ====================HOX2a_HOX2a        <-------TEIL                                               <------ZmHOX2a(2)    <---------------AtSPL3                                         ==================HOX2a_HOX2a    <---------------AtSPL8                                         =====================HOX2a_HOX2a   <-----------RAV1(2)                                             --------->At4g35610  <---------ZAT2           <---------At4g35610                    --------->ARR11(3)       <--------- ------NtERF2              --------->At4g35610                    <---------ARR11(3)  <---------ANAC55(2) ------->LBD16      <---------GLK1(1)                             --------->ARR14(2)  --------->ANAC55(2) ------LBD16   <----------DOF2             <---------TOE1(2)      <---------ARR14(2) <-------TEIL   ccggagcaggtacttcactttgatttctctgctcaatctaactcgctcgtttacttactgctaattgggatctgtatatcctcctgatacgtttttcgat  9374200                                                             ----------->GT1                                                             <---------ANAC58                                                             <---------ANAC46                                                             <---------ANAC58                                                             <------MYB83                              <---------ICU4                 <------MYB46(1)                             <---------YAB1                 <---------MYB46(3)                           --------->YAB1                   --------->MYB55(2)                         --------->ARR11(3)             <---------MYB46(3)        <---------YAB1                      --------->SPL7                  --------->GLK1(1)      <----------DOF2               --------->ZAT6--------->ICU4          <---------ARR14(2)      <---------DAG2             <<<<<<<<<<<<<<<<<LFY       ----------->GT1 <-----------RAV1(1)<-------TEIL         <----         <---------TOE1(3) <---------ICU4            --------->ARR14(2)<---------TOE1(2)   <--------- --GT1   <---------TOE2(3)<------ZmHOX2a(2)       --------->ETT(1)     --------------->AtSPL8------->TEIL   ttgatggaatcaaggttacactggtacgatcatgatgaagaatggaaaattgtcggatttgttgggtgaattgcaggtacttttttgattctatgcattt  9374300                                                               <------MYB83                                                               <---------ANAC46                                                               <------MYB46(1)                                      <---------WOX13(1)      --------->MYB111(2)--------->GLK1(2)                           <---------YAB1        <----------DOF2                <---------GLK1(1)       <-----------GT1   <---------AHL20(2)     <---------ANAC58           ----------->GT1 --------->HSFC1(2) -----AHL20(2)       <---------AHL20(2) --------->ATHB12      --------->MYB46(2)--------->GLK1(1) ---------------ANAC81  <---------AHL20(2)      <---------ANAC58 <---------REM1(1)         <---------HSFC1(2)   ttttttttgtttctctccttgatttttttatttttgactaattgatttgtgctttcgatagagtttggtgaagggaatggagaaatctggagaagggtct  9374400  Previous    Next  AGI:  At1g27000.1    Description:  bZIP family transcription factor. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G02730.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G02730.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO41042.1); contains InterPro domain Protein of unknown function DUF1664 (InterPro:IPR012458) Range:  from: 9373913    to: 9376707    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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