Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->ARR11(3)                                                          <---------ARR11(3)                                                         <---------CCA1(1)                                                         --------->RVE1(1)                                                         <---------RVE1(1)                                                         --------->CCA1(1)                                                         --------->GLK1(1)                        <--                                                         <---------GLK1(1)                        <--                                --------->CCA1(2)       --------->ARR11(3)                        ---          <---------AHL20(2) --------->ANAC58           <---------ARR11(3)                        <-- ------ANAC46                --------->ANAC58    <---------ANAC46                      --------->YAB1 --YAB1----------->GT1       --------->ANAC46    <---------ANAC55(2)         <---------LBD16---------   tgtggaacatagttaattgtttatcaaatccaagctatgagacgtttgattatgtgaagatatctccaattgatcaaaacccggtttgatagtaatagtt  9362900                      <------MYB83                      <------MYB46(1)                     <---------TOE2(2)                     <---------TOE1(2)                  <---------ANAC55(2)                                                     <----------        <-----------GT1        --------->AtLEC2                                      <---------YAB1 --------->CCA1(2)<---------ANAC46                                              --------->ZAT6 -------YAB1      --------->ANAC55(2)--------->At4g35610                       <---------ZAT14  ----- -------TOE2(3)   <---------ANAC58   --------->ZAT2                            --------->ZAT18  <---- -------->ARR10   <---------ANAC58   <---------At4g35610     --------->ZAT18   --------->ZAT14  <---- -------TOE1(3)  <---------TOE2(3)---------->DOF2 <---------AHL20(2)           <---------ZAT18 <----- >ICU4<---------WOX13(1)    <---------AHL20(2)   --------->AHL20(2)        <---------------AtSPL8   aagatttgatttactgatttacgtaggtatttaatgcaaagctgtctgattttaaatttggattgcacaactagagtaatgtacactatgtttatccata  9363000                                         <---------ANAC55(2)                              ------->TEIL                                --------->ARR11(3)                           --------->ANAC55(1)                            <---------ARR11(3)                           --------->ANAC55(2)                           <---------CCA1(2)  ----------->GT1          --------->ANAC46                          <----------DOF2      --------->ANAC46 -GT1                      <---------ANAC55(2)                  --------->WRKY12 --------->ANAC46 ---->ARR14(2)        <----------DOF2    <---------YAB1         ----------->HVH21--------->ANAC58 -----ARR11(3)     ------->GAMYB   <---------TOE2(3)            --------->WRKY38(1)   --------->AtLEC2 -----ARR11(1)    --------->MYB46(3)--------->ZAT6              --------->WRKY45 --------->ANAC58  -- ----CCA1(2)   --------->MYB46(3) <-----------GT1             <----------DOF2<----------DOF2       --   tctatggataaacctcgacaaccgcttatacgtatttaacattacgaaaatgtgttctcaaatgctttgacctttatatctttaagccattcaaacaaca  9363100                                                                                                 ----                                                                                             <XXXXXXX                                                                                             <xxxxxxx                                                                                             <xxxxxxx                                                                                             <xxxxxxx                                                                                             <XXXXXXX                                                                                             <xxxxxxx                                                                                            ---------                                                                                            <--------                                                                                            <xxxxxxxx                                                                                           <---------GLK1(1)                                                                           <---------MYB52(1)<xxxxxxx                                                                      <---------ARR14(2)   --------->GLK1(1)                                                                      --------->ARR14(2)<---------MYB52(1)                                                                     <---------GLK1(1) --------->LBD16                                                                     --------->GLK1(1)<---------HSFB2a(2)                                                                    ----------->ARR10<---------LBD16                                                                  --------->LBD16  <-----------HVH21                     --------->YAB1              --------->ARR11(3) --------->ARR14(2)<---------LBD16     --------->TOE1(3)                           <---------ARR11(3) <---------ARR14(2)--------->HSFB2a(2)     --------->TOE2(3)                         <---------AHL20(2)<---------ANAC46  <---------PCF2---- ------->YAB1       <---------YAB1            --------->AHL20(2)<---------LBD16    --------->TCP20 ------->AHL20(2) --------->YAB1      <-----------GT1    --------->HSFB2a(2)       <---------ARR14(2)   attaaaaccttaaacatctaaaatgataagatggaagtgtttaccatataaaatctcgtctcgacctgcggaaatccgttgaatgggtccgggagttccc  9363200                  <---------ICU4        <---------ANAC46      --------->ZAT14      <---------ZAT14  ----------->GT1  <---------ALFIN1--------->ATHB12 ----->LBD16      <--------HAHB4 XXXXXXXXXXXXXMIR395A/D/E                       <---------ZAT14 xxxxxxxxxxxxxsmallRNA(si3)                     --------->ZAT14 xxxxxxxxxxxxxsmallRNA(i2)                      --------->ZAT18             --------->MYB46(3) xxxxxxxxxxxxxsmallRNA(fl3)                    <xxxxxxxxxxxxxxxxsmallRNA(s) <---------ATHB12 XXXXXXXXXXXXXMIR395B/C/F                      <xxxxxxxxxxxxxxxxsmallRNA(i)*TSS  --------->YAB1 xxxxxxxxxxxxxsmallRNA(se3)                  XXXXXXXXXXXXXXXXXXXX>MIR395A/D/E------->GAMYB >ARR14(2)       <---------YAB1           <---------ATHB12       <------ZmHOX2a(1)  <------------CBF -ARR14(2)       --------->ICU4      --------->ANAC46      --------->ZAT6  -------->P xxxxxxxxxxxxsmallRNA(fl3)        <---------ARR14(2)      --------->GLK1(1)------>MYB83    <---------ANAC58 xxxxxxxxxxxxsmallRNA(le3)        --------->ARR14(2)    <------ZmHOX2a(1)  ------>MYB46(1) <---------ANAC46 ----->ANAC46  --------->YAB1    <---------CCA1(2)   --------->At4g35610--------->MYB46(3) <---------ANAC58   ccaaacacttcagtggataatcatttagaaaaattgtatccccaatgaagtgctcagaggaactctaggagacatccaaccaagaatattgtttcttgag  9363300                                                                                    --------->AHL20(2)                                                                            <---------ANAC58                                                                            <---------ANAC46                                                                            --------->ANAC55(2)                                                                            <---------ANAC55(2)                                                                            <---------ANAC58                                               <---------REM1(1)            <---------ANAC55(1)            --------->ATHB12                  <---------TOE2(3)           <-----------GT1       <----           <---------YAB1                   <-------TEIL          ---------->DOF2 <----------DOF2         --------------->AGL15             <--------P          ----------------------->TaNAC69(2)   tatttcatgtactatgagtggaatacgactatacgagtacaagaggttgatgtaagttttgagaagatgaaagtagttacgtttctttatatatagacta  9363400                                                                    --------->YAB1              <------ZmHOX2a(1)         <---------YAB1             <------ZmHOX2a(2)        <--------              --------->YAB1          --------->YAB1              <---------ARR11(3)        <--------          ---------->DOF2             <--------HAHB4              --------->ARR11(3)   ---------->DOF2  ---------->DOF2                     <---------ICU4  <---------ANAC58              --------->ANAC58 -----ZAT14 <---------TOE2(3)        <---------YAB1   <---------ANAC58              --------->ANAC58   tagttaaaggcttaaaggataatctccatacatatgtctattattacacagagatagcgagacagagagatcataagatgatgaccaaggaaagcttttt  9363500                                                                     <----------DOF2                    ---------->DOF2                             --------->RAP2.6(3)      --------->ANAC58                                          --------->SPL7         <------ZmHOX2a(1)      --------->ANAC46       ----------->GT1                  <---------SPL7 <---------YAB1 --DOF2    --------->ICU4---------->DOF2               ---------->DOF2     --------->ANAC55(2)    --- -DAG2--------->ANAC58<---------TOE2(3)      ------->TEIL   <-------TEIL <-----------GT1          <--   gaatatagacgcaattttgggttaaaggaaagagtaaaaagaatacgaatgttgaagaaaagtccatacggcttttcacatgatagaaaggatgcaaaac  9363600                                              <---------MYB52(1)                                             --------->At5g28300                                     --------------->AGL15                                     <---------------AGL15                     --------->AHL20(2)     ----------->GT1                     <---------AHL20(2)  --------->MYB52(1)                <---------YAB1      <-----------------AG                         --------->AHL20(2)<-                <---------AHL20(2)  <-----------------AGL1           <---------ANAC58       <--------      --------->GLK1(2)             ----------------->AGL2       ----------->RAV1(2)        ---------     <---------GLK1(2)         --------------->AtSPL8     --------->ZAT14  --------->WOX13(1)     <-- ------>ANAC46--------->YAB1<----------DOF2<------------MYB.PH3(1) ------>ZmHOX2a(1)  --------->AHL20(1) -------ANAC55(2)   <---------AHL20(2)--------->ANAC46--------->ZAT6 <---------ANAC58 <---------AHL20(1)   acgtagagattctgttttataatttatatgcttttagtacccataacggttatttctcactacattctcctgcttgtcaatcttttaatattttttaatt  9363700                                                                                            <--------                                                                                   <---------ALFIN1       <---------YAB1                                                             --------->LBD16 <---------TOE2(3)                                                              <---------LBD16 <---------TOE1(3)                                                   <-----------GT1       ---------- --------AHL20(2)                                                   ----------->HVH21 --------->ICU4 -AHL20(2)                                                     <---------AHL20(1) <---------ZAT14 >AHL20(2)                    ------->TEIL <-----------GT1     <---------AHL20(2)--------->ANAC58  -- -------YAB1       ---------->DOF2       <---------AHL20(2)    --------->AHL20(2)--------->ANAC58 ---   tttaatgttatgactatggagaaaagcttatggatgttgatattttttcattaccaaaaatccattttatttgacattttgtcccgcactgattaaagaa  9363800  Previous    Next  AGI:  At1g26973.1    Description:  MIR395A; miRNA Range:  from: 9363183    to: 9363275    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version