Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->AHL20(1)                                                                                   --------->AHL20(2)                                                                               <---------AHL20(2)                                                                               <---------AHL20(1)                                                                         <-----------GT1                                                                         --------->YAB1       -------                                                --------->YAB1      <---------AHL20(1)    --------->YAB1                                                --------->AHL20(2)  --------->AHL20(1)   <---------YAB1                                            --------->AHL20(2)      <---------ARR11(3) -------->HAHB4                                            <---------AHL20(2)      --------->AHL20(2) <---------ICU4                                     <-------TEIL <-----------GT1   <---------AHL20(2) --------->YAB1                                   --------->At5g28300             --------->AHL20(2) --------->ICU4                                 --------->ANAC55(2)            <---------AHL20(2) <---------AHL20(2)                                 <---------------AtSPL8        <---------AHL20(2) <---------AHL20(2)                                 <---------ANAC55(2)--------->ANAC46--------->ARR11(3)<---------ATHB51                            <---------ICU4 --------->AHL20(2)  --------->AHL20(2) --------->AHL20(2)              <---------ARR14(2) --------------->AtSPL3 <---------At4g35610    --------->AHL20(1) -----AGL15   --------->ARR14(2) --------------->AtSPL8 --------->At4g35610    --------->AHL20(2)   tgaagtatttgttacaaatactcaaattgttcattacggtacatatttaattatacacatctgaattaaatatattcacaataaattaattatgataatc  9355500                    <---------AHL20(1)                                <---------WRKY18(1)                    <---------AHL20(2)                               --------->WRKY38(1)                    --------->AHL20(1)                               --------->WRKY12                    --------->AHL20(2)                            --------->ATHB12               <---------YAB1                                    <---------YAB1                    <-          <---------ICU4  <---------ANAC58                     <---------ICU4                      --         --------->AHL20(2)         --------->GLK1(2)          --------->YAB1--------->At5g28300   <-         <---------AHL20(2)     --------->YAB1      --------->At5g28300 --------->MYB46(3)         --         --------->ICU4   <---------ANAC58 <---------ICU4     <---------ATHB12     <---------ARR11(3) <---------MYB46(3)--------->AHL20(2)     <---------ATHB12  --------->WOX13(1)     --------->ARR11(3) -->GLK1(2)  <-----------GT1----------->HVH21    <---------At5g28300 --------->WRKY45   <---------AHL20(2)   tagtggttgaaaaaattactattaaattgagtgaccataatctaatcaattcactgtaatatcaatcatggttgaccactgtaaacatcttaaattgcaa  9355600                                        <---------ANAC58                                 <---------YAB1                                              --------            --------->YAB1     --------->YAB1                                    <---------ICU4         <----------DOF2      <---------YAB1                                    --------->ICU4    <-- --------ARR14(2)          --------->ICU4                                    <---------AHL20(2)   --- ------->ARR14(2)          <---------YAB1                --------->YAB1      --------->AHL20(2)  <--- --------KAN4(2)      --------->LBD16   <---------ANAC58<---------YAB1       <---------YAB1 <-------- -------->TaMYB80   <---------LBD16 ------->TEIL   --------->GLK1(2)  <-------TEIL    <---------YAB1   gaatatgctatctttcacaatgtccggagattattatgaatttcgtttcaaaaattctataatagaaaaatatacatatataattagtatgactatgata  9355700                                                                                   --------->AtMYB61                                                                                  ----------------->AGL1                                                                                 -------->P                                                                           <---------MYB52(1)                                                                          --------->LBD16                                           <---------ANAC55(2)           <---------ANAC55(2)     <----------DOF2             <----------DOF2                         --------->ANAC46           - ->YAB1                          --------->TOE2(3)                       --------->ANAC55(2)--------- -------ARR11(3)               <---------YAB1                            --------->TOE2(3) --------->ARR14(2) ------>ARR11(3)              --------->ARR11(3)                      --------->ARR14(2)   <---------ARR14(2) ------CCA1(2)            --------->YAB1   --------->ANAC55(2)        <---------ARR14(2) ----------->GT1 -YAB1       ----------->GT1  <---------ARR11(3)                     <---------GLK1(1)--------->MYB52(1)   tatctgtctttctattcgtaaaaaacaagaattatctttaaaaatacttgatatgaaaaactacatagtacatatccgtaatctaccaaaacggatacaa  9355800                   <---------HSFB2a(2)              --------->HSFB2a(1)                   ---------->DOF2       --------->ETT(2)              <---------HSFB2a(1)             <---------ALFIN1  --------->YAB1             --------->ARR14(2)              <---------ALFIN1   <---------ICU4 ---------->GT1    --------->HSFB2a(2)     <---------ALFIN1 <---------YAB1<---------ETT(2) >CCA1(2) <---------TOE2(3)   ---------->DOF2--------->ANAC46--------->YAB1                    <-----   cgtagtaaaattagggattttccaaaacatacaaaagcccatattccacccctccaaagactataatcatcccatgtctacctctctgtctcatcggctt  9355900               <---------AHL20(2)                                                       --------->ZAT14       *TSS   --------->AHL20(2)                                                        <---------ARR14(2)      ---------->ID1                                                                    <---------ZAT14      ---------->ARF1                                         --------->STY1(2)      <---------ANAC46  <---------ANAC58           --------->YAB1         <-----------GT1                ----------->GT1  <---------ANAC58         --------->AHL20(2)   ------>MYB83  <---------STY1(2)   --------->ALFIN1 -----DOF2 ------>ZmHOX2a(1)<---------AHL20(2)  ------>MYB46(1)        <-----------GT1  --------->ARR14(2)   tgagtcttgtctcctattttatatactcatataataaacaaaataaaaccaaattttctaatctagctagtatttagcctataagtggtgtatactcagt  9356000                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                  ---                                                                                                 ----                      ------>ZmHOX2a(1)                                      <---------ANAC46    <---                   ------>MYB83                                           --------->ALFIN1       <---                   ------>MYB46(1)                                        <---------ANAC46      -----                 --------->AtMYB61                                      <---------MYB46(3)      -----                 <---------ALFIN1    <---------AHL20(2)                --------->ALFIN1>>>>>>>>>TBF1-              <---------ALFIN1 --------------->AGL15           --------->ANAC58  <------ZmHOX2a(1)---             --------->MYB46(3)<---------------AGL15  <----------DOF2  <---------DEAR3(1)       -----           <-----------GT1     <----------DOF2      ------->TEIL       <---------AtMYB61      -------     <---------AHL20(2)   <<<<<<<<<TBF1      <----------DOF2   --------->ANAC58<---------------------   cttctaattcatttcaccaccatccttcttcttctttatttagttttctttctgtactttgaaccaagacaaggtggtggagaggagaagaagaaaacaa  9356100                        --------->YAB1 ------->P              -------->HAHB4 ----->MYB83            <---------ICU4 --------->RAV1(1)     --------->ICU4 ------>AtMYB61        <---------ATHB51 ----->MYB46(3)        <---------YAB1 ------MYB52(2)      --------->YAB1 ------MYB55(2)      <---------ICU4 ---->ANAC46        <---------YAB1 ---->ANAC58        --------->ICU4 ----->MYB46(1)   --------->YAB1            --------->LBD16                                --------->ANAC46 ---->GAMYB    ----------->GT1             --------->LBD16                            <------ZmHOX2a(2) ---->ANAC58 <---------ANAC58      <----------DOF2                                   --------->ARR11(3) -->MYB46(3) <---------ANAC58<---------ANAC58                                  >>>>>>>>>TBF1 --TaNAC69(2)<---------ANAC46<---------ANAC58                     --------->AtMYB61  <---------ARR11(3)   ccaacaagagacatgtcttgtaataataatggcttagctttcttccctgaaaatttcagtctccaaaaccatcaccaagaagaagaagatcaccctcaac  9356200                                                                                               <-----                                                                                 ------>ZmHOX2a(2)                                                                               --------->ARR14(2)                                                                               --------->ARR14(3)                                                                               <---------ARR14(2)                                                                               --------->AGP1  <-----                                                                               <-----------ARR10                                                                               <---------ARR14(3)                                                                    <-----------GT1       <----------DOF2                                                                 <-----------GT1<------ZmHOX2a(2)                                                          ==============================HOX2a_HOX2a                       --------->At4g35610                =============================HOX2a_HOX2a                  --------->REM1(1)  <----------DOF2      <----------DOF2      <---------ARR11(3)                 <-------TEIL  <-----------GT1            ------>ZmHOX2a(1)    --------->ARR11(3)   ttcttcaagacttccatggtacatcatctcaattaacacctttgttcaaaatttctaatcctttttttttctacttctcaagatcttctctgtttttagg  9356300                            ------->MYC2                            <-------MYC3                    <---------ATHB12              ------>ZmHOX2a(2)             --------->GLK1(1)             <---------GLK1(1)             <------ZmHOX2a(2)            --------->ARR14(2)            <---------ARR14(2)            <---------ARR11(3)                               --------->At4g35610      ------>ZmHOX2a(2)            --------->ARR11(3)                          ------->TEIL                <---------AGP1           --------->RVE1(1)------->MYC3               --------->MYB52(1)           ------->TEIL        ---------->DOF2     <-------MYC2           --------->CCA1(2)  --------->KAN4(1) ----TOE1(3)<---------ARR14(3)                    --------->ARR14(2)  <---------KAN4(1)         <---- ----TOE2(3)--------->ARR14(3)                    <---------ARR11(3) <---------KAN4(2)===============   gtttctaggtaaaagatctccaatgaacaacgtgcaagggttttgtaatctagatatgaacggagatgaagaatattcagacgatggatctaagatggga  9356400  Previous    Next  AGI:  At1g26960.1    Description:  ATHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23); DNA binding / transcription factor. Identical to Homeobox-leucine zipper protein ATHB-23 (ATHB-23) [Arabidopsis Thaliana] (GB:Q8LFD3;GB:Q9ZVG2); similar to ATHB13, DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G69780.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62385.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047); contains InterPro domain Leucine zipper, homeobox-associated; (I Range:  from: 9355907    to: 9357447    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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