Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                   --------->ANAC46                                                         ---------         --------->ZAT14                                                                   --------->AHL20(2)         <---------ZAT18                                                    <---------------AGL15         <---------ZAT14                                                    --------------->AGL15 ---At4g35610     <---------LBD16    --------->ANAC46                  --------->ICU4      <---------AHL20(2)   gatatagactctgcacattatacggacttacatttgtaaactccatcaactcttatccatctattgtttagtcatgttcaatattgagaaaaattaaagg  9351000                                   <---------MYB52(1)                           ---------->DOF2                     --------->REM1(1)      <---------REM1(1)   <---------ATHB12                     --------->ANAC46            ---------- ---TOE2(3)    --------->AHL20(2) <-------GAMYB               --------->ZAT14        ---------->DOF2 ->DOF2      <----------DOF2     <---------MYB46(3)           <---------ZAT14    ---------->DOF2<----   aaattaacatgtagcctttaaattttcaataaaggtcgttaagttgaagacttgaagttgatactacaccatgtgaatagctcgaaagaaagaaggttaa  9351100                                            <---------ANAC58                                            <---------ANAC58                                        <---------ANAC46                                        <---------bZIP60(2)                                        <---------ANAC58                                        --------->TGA1a                                        <---------O2                                        --------->O2                                        <---------TGA1a                                        <---------ANAC58                          ----------->GT1  <---------DEAR3(1)                         --------->ANAC58  <---------MYB46(3)       --------->YAB1<---------O2               ---------->DOF2       ----------->HVH21             <---------ATHB12       ----------- ->GT1<------ZmHOX2a(1)  --------->ANAC58 --------->ALFIN1       --------->WOX13(1)     ---------->DOF2 -----ANAC46   ===================================bZIP_DOF    <-----------GT1     <---------ANAC46   gtggaacaggaataagagaaagagagcaaggaaaaaaacttgacgtgggtgagttttacacatataacaatcaagaagttgttctcgtgggaaagtaagt  9351200                          <----------DOF2                       --------->ARR11(3)                       <---------ARR11(1)                       <---------ARR11(3)                                  <---------AHL20(2)                       <---------ARR14(2)                               <---------ICU4                 <-----------GT1                                        <---------AHL20(2)               --------->AHL20(2)                                      --------->AHL20(2)   <-----------------------TaNAC69(2)                                --------->YAB1   <---------HSFC1(2)  --------->GLK1(2)                            --------->ICU4   --------->At4g35610 --------->ARR14(2)                           <---------YAB1   --------->HSFC1(2) <---------ARR14(1)      --------->YAB1      --------->YAB1 ---------->DOF2    < >GT1        --------->YAB1                  <---------YAB1      --------->AHL20(2)    ---------->DOF2   ttagaagcttaccaaaaataaacagtatctttttgtactaagcgactatgaaaaaaactgagaacaaataataataaatatttgaaagctaaagacaccc  9351300                                                                 <<<<<<<<<TBF1                                                              <<<<<<<<<TBF1                <---------ALFIN1                    <---------YAB1            ------>ZmHOX2a(2)         --------->YAB1                <---------CCA1(2)   <<<<<<<<<TBF1    <---------ARR11(3)   <---------TOE2(3)                   ---------->ID1  <---------YAB1       --------->ARR11(3)  ---------->DOF2 <---------ALFIN1------->TEIL   ------>ZmHOX2a(1)  <<<<<<<<<TBF1            -------- ---------YAB1 ------->GAMYB   --------->AtLEC2  ====================================HOX2a_HOX2a   ttattaaagaaacataacccacaccctccctccatgcacttgtctcttctccttcttattcttcttcttcttcttcttgatcttctctctcttcataaat  9351400      --------->YAB1        ------>ZmHOX2a(1)     <---------YAB1        <---------ALFIN1     ----------->TBP<----------DOF2      *TSS      <---------ALFIN1   ----------->HVH21 ->AHL20(2)      <---------ALFIN1      <---------ALFIN1           <----------DOF2          ------>ZmHOX2a(1)   ttgcattataaaaacacatccactttgctcctccctcttcaacaccttcttctccactctcattctctctttctgacacattaactacttatccttcttg  9351500                                             --------->ANAC58                                             --------->ANAC58                                       --------->AHL20(1)                 --------->ANAC46      <---------AHL20(2)            =============================HOX2a_HOX2a                 --------->ANAC58      <---------AHL20(1)            <------ZmHOX2a(2)        -------                 --------->ANAC58   --------->YAB1                  --------->ARR11(3)        <------               --------->REM1(1)    --------->AHL20(2)--------->ARR11(3)         --------->ANAC46               <---------ALFIN1    <---------YAB1     <---------ARR11(3)      <-------TEIL <------ZmHOX2a(1)              --------->ZAT14    --------->YAB1---------->DOF2      <---------ARR11(3)     ==========   cattcttctctctctctacacccaaacaaacacacttataatatatcaagaaagaagatgtctagcagaagatcatcacgttcaagacagtcaggaagct  9351600                                                                            ----------->HVH21                                                                         --------->ARR14(2)                                                                         <---------MYB52(1)                                                                         <---------ARR14(2)                                                                        <---------SPL7                                                                       --------->DEAR3(1)                                                                     --------->ABI4(1)                                                                     ------>NtERF2                                                                    --------->DREB2C(2)                                                                    --------->RRTF1(3)                                                                    --------->RRTF1(2)                                                                    --------->RAP2.3(2)                                                                    --------->RAP2.3(3)                                                                    --------->DEAR3(1)                                                                    --------->RAP2.6(2)                                                                    <---------DEAR3(1)                                                                    --------->ATERF1(2)                                                                   --------->ATERF1(1)                                                                   --------->RRTF1(1)                                                                   --------->DEAR4(2)                                                                   --------->RAP2.3(1)                                                                   --------->ERF1                                                                   <------NtERF2                                                                   --------->ORA47(2)                                                                   --------->RAP2.6(1)                                                                  <---------DREB2C(1)                                                                  <---------At4g35610                                                                  <---------RAP2.3(1)                                                                  <---------DEAR4(2)                                                                  <---------ATERF1(1)                                                                  --------->At4g35610                                                                  --------->ABI4(1)                                                                  ------>NtERF2                                                                 --------->DEAR3(1)                                                                 --------->ANAC46--------->ANAC58                                                                 --------->ATERF1(2)                                                                 --------->RAP2.3(2)                          ------>ZmHOX2a(2)                      <---------DEAR3(1)                         <------ZmHOX2a(2)                       <---------ATERF1(2)                        --------->ARR11(3)                       --------->RAP2.3(3)                  <---------GLK1(1)                             --------->ATERF1(1)                 <---------GLK1(2)                              --------->ERF1   --------->ANAC58       ----------->HVH21<---------ARR14(2)                      --------->ORA47(2)  --------->GLK1(2)     --------->ARR14(2)             --------->LBD16<------NtERF2 <---------GLK1(2)--------->GLK1(1)           --------->ANAC46  --------->DEAR4(2) -->At4g35610    --------->ARR14(2)         <---------ALFIN1    --------->RAP2.3(1) ---At4g35610<------ZmHOX2a(2)       <---------At4g35610       <---------RAP2.3(1)                 <- ===================HOX2a_HOX2a      --------->At4g35610       <---------ATERF1(1)        --------->ANAC46   caagaatctctgacgatcagatttccgatcttgtttctaagctccaacacctcatccctgaacttcgccgccgccgttctgacaaggtatacacttcaaa  9351700                                                                        ------->TEIL                                                                    ------->MYC2                                                                    <-------MYC2                             <-------TEIL                           ------->MYC3                    <---------ANAC58                                <-------MYC3                    <---------ANAC58                             <---------ALFIN1       --------->AHL20(2)  --------->ARR14(2)                   <---------ZAT14       <---------AHL20(2)  <---------ARR14(2)                <---------ANAC58           <---------ATHB12 ----------GT1   <----------DOF2                             <---------ANAC58 ---------->DOF2  <-----   ataacaaattttaatctatctttcttgcatatacatacttattttgtatacttgtataacttagcctgcacatggacttagaaagttcaaatgaatagga  9351800                                                             <---------ANAC58                                                             <---------ANAC46                                                             <---------ANAC58                                                         <-------MYC3                                                        --------->O2                                                        =======================================bZIP_DOF                                                        <-----------RAV1(1)                                                        <---------TGA1a                                                        --------->ALFIN1                                                   --------->ETT(2)                                                 --------->REM1(2)                                                --------->ALFIN1                                              <---------ANAC58                     <---------AHL20(2)       <---------ANAC58                     --------->AHL20(2)     ======================MYC_MYB             ----------->GT1           --------->YAB1           --------->GLK1(1)   <---------O2                ---------->DOF2 <          <---------AHL20(2)<---------AtLEC2------->GAMYB------->MYC3 <-----------GT1--------->DAG2<-    ----------->GT1 --------->AHL20(2)   --------->MYB52(1)--------->ZAT18   --------->ANAC46 ------- -ZmHOX2a(1)  <-----------GT1  ----------->GT1<---------ANAC46       --------->AHL20(2)     ---------   accatatagtatataataactaattaatatgcatggtgaaatccaacggcgtgtagacatgtggcctacaattaactatacgtagataaagtaacattaa  9351900  Previous    Next  AGI:  At1g26945.1    Description:  transcription regulator. similar to transcription regulator [Arabidopsis thaliana] (TAIR:AT3G28857.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68305.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 9351441    to: 9352748    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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