Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->LBD16                                                                   --------->ANAC46                                                                  --------->HSFB2a(2)                                                                  <---------HSFB2a(2)                               --------->ARR11(3)          ------>ZmHOX2a(2)                    <---------HSFB2a(2)                   <------ZmHOX2a(2)               <---------MYB52(1)                    --------->HSFB2a(2)                  --------->ARR11(3)             <---------ANAC58              --------->ARR11(3)             <---------MYB46(3)  <---------LBD16        <---------ANAC58              <---------ARR11(3)<------ZmHOX2a(2)        <---------ARR11(3)  --------->DAG2        --------------->AtSPL8 <---------ARR11(3)    ---------->DOF2        ---------->DOF2   <------   cagtagtaagcttgtacatcttcttgaagtgaagatcagactcatcgttgttgagaaaagatcgtttcccagaaaccaaaaagctccatttcgtttcttt  9337400                                                                                               ------                                                                                              <------               --------->DAG2                                            <---------------------WRI1              ---------->DOF2                                   <---------------AGL15     --------->ANAC58      <---------ANAC58                                          --------------->AGL15     --------->ANAC58      <---------ANAC58                                          <-----------------AGL1--------->ANAC58      <---------AtLEC2                       --------->SPL7     ----------------->AG---------->DOF2 <---------ANAC46                           <------ZmHOX2a(1)  <-----------------AGL1 --------->ANAC58 <---------ANAC58                --------->ANAC58         <-----------ARR10       --------->YAB1 <---------ANAC58 --------->ALFIN1 --------->YAB1         --------->ARR11(3)    ------->TEIL<-------- ----DOF2----------->GT1         --------->ANAC58         <---------ARR11(3) <---------ATHB12------->TEIL   atggcttggcatggtgaaaagtgttgaaactagacaagaatcacgaggacgaccttcgaacatcttctcaaaatgggcaatgaatcaaaagcaagaacct  9337500                             <-----------GT1                                             --------->GLK1(2)                         <----------DOF2                                          ----------->GT1                   ------>ZmHOX2a(2)                                         --------->ANAC58                  <------ZmHOX2a(2)                               --------->GLK1(1)      --------->ARR11(3) --->TOE2(3)     <---------ARR14(2)       --------->TOE1(3)       <---------GLK1(1)      <---------ARR11(3) ---HSFB2a(1)    --------->ARR14(2)     ------->TEIL         --------->At4g35610---------->DOF2    <- -ARR11(3)      <------ZmHOX2a(1)<-----------RAV1(2) <------ZmHOX2a(2)       --------->ANAC58   <----   ttgttctgtcttcagataggatccaagcttttaacccagacgaagcttaaaatcgatcccatttgctgaaatctgaaacaagaaaagtcaaaatctttta  9337600                                                                                                <----                                                                                                -----                                                                                            <--------                               ---------->DOF2                                  <---------AHL20(2)  <---------ANAC58       --------->ANAC58                                      <---------ARR11(3)  <---------ANAC58       ----------->GT1      <---------YAB1      --------->AHL20(2)        --------- ---------DOF2           --------->ANAC58   --------->YAB1>>>>>>>>>TBF1        --------->ARR11(3) -------GT1         <----------ID1    --------->YAB1   >>>>>>>>>TBF1           <---------AHL20(1)   actttcttgcaactacaatataagaacaagaaaaaaagaatgagaattgtaattgaagaagaagaagttttaatatttgtatatatttgagagattaatt  9337700      <-----------GT1                                   <---------TOE2(3)                       <---- -----AHL20(2)                                      --------->TOE2(3)           --------->At4g35610-- ---->AHL20(2)                                   <-----------GT1<---------At4g35610  --------->ANAC58 -AHL20(2)             <----------DOF2    --------->YAB1<---------TOE1(3)*TSS --------->YAB1  ------- >AHL20(2)          <-----------GT1<---------CCA1(2)--------->TOE1(3)<----------DOF2 --------->ANAC58   aaactaattttctctctgtgtttttctttacatttgtctatctctcatattataccttaaggtttaagctcctttgcaaatcagaagaagcaaatggact  9337800                                               <---------AHL20(2)                                              --------->AHL20(2)                                              <---------AHL20(1)                    <---------------AGL15                                          <---------AHL20(2)                        --------------->AGL15                                          --------->AHL20(1)                       <-----------------AGL1 --------->ETT(2)            <----------DOF2  <---------AHL20(2)                   <-----------------AG <---------ETT(2)     <---------ANAC46    --------->AHL20(2)                       <-----------------AGL2 ------DOF2         --------->ZAT14       <---------AHL20(1)                      <---------At5g28300 ------->REM1(2)    <---------ZAT14   <---------AHL20(2)         <---------YAB1<----------DOF2 ------ >TEIL        --------->TOE2(3)       --------->AHL20(2)      <---------AHL20(2) <-----------GT1   ttgtagacaaaactaatctcagtgttgtgttcttttttttttaattaattaatttcttatgtgttttattcttgtactgtgttttactgttttaggcaaa  9337900               --------->AHL20(2)               <---------AHL20(2)           --------->AHL20(2)           <---------AHL20(1)           --------->AHL20(1)        <--------HAHB4        <---------ICU4        --------->YAB1        --------->ATHB51       --------->AHL20(2)                     --------->DAG2              <---------ANAC58       --------->ICU4                        ---------->DOF2              <---------ANAC58     --------->YAB1   ---------->DOF2  ----------->GT1                <----------DOF2       <-------- ---------->DOF2   --------->YAB1    ---------->DOF2               --------->ARR11(3)       <-------- ---->DOF2 <---------AHL20(2)      <---------ZAT6--------->YAB1    <---------ARR11(3)       <--------   agctaaagaataattaattaaaaataaagagagattagtgaaagtgaaaaagcataagagacgtttcaagttctttgcttcagactaaacacgagcgtgt  9338000                                                     <---------------AtSPL8       --------->TOE2(3)                    --------->YAB1         <---------YAB1            --------   <---------MYB52(1)        <---------ANAC58        --------------->AtSPL8                 <-------- -ANAC46          --------->MYB46(3)  ------>ZmHOX2a(1)          --------->YAB1  <---------AHL20(2) -ANAC58        <-----------GT1      --------->TOE1(2)         <-----------GT1   --------->AHL20(2) -ANAC58    ------->TEIL     <---------ANAC58        --------------->AtSPL3 <---------AHL20(2)      -   aatccgataccttgaatctaaccattctattgcttcaatcctacaatattgattttaagtacaattttcatcatacatttttttttaatacattatcatc  9338100                                                     <---------LBD16                                                     <---------ANAC46                           -----                                                    <---------ANAC46                     --------->At5g28300                           <----------DOF2          <---------ANAC58                    ----------->GT1                      <-----------GT1           <---------MYB46(3)                  <---------WOX13(1)                   <---------------AtSPL8       <------MYB83                     <---------AHL20(2)                <---------YAB1                <--------P                         --------->AHL20(2)   ----------->GT1 --------------->AtSPL8   <-----------RAV1(1)                 <---------AHL20(1) ->YAB1   <---------AHL20(2)       <---------ANAC58 <---------ANAC58            --------->AHL20(1) -YAB1    --------->AHL20(2)    <----------DOF2 <------MYB46(1)                 <---------AHL20(2)  < -------->YAB1  <---------TOE2(3)  <---------ANAC58------>NtERF2                --------->AHL20(2)  -   aaaaatagtttataaattgagattgtactcttttctttcttgggacatgttggtgcctggaatgtggatgattttttgaaaatttaattgctgtaaaaaa  9338200                                                                                        --------->ARR11(1)                                                                                        <---------GLK1(2)                                                                                        <---------ARR14(2)                                                                                        --------->ARR14(2)                                                                                        <---------ARR11(3)                                                                                  ------>NtERF2                                                                                 --------->RAP2.6(2)                                                                                 >>>>>>>>>AtERF-7                                                                                 >>>>>>>>>AtERF-5                                                                                 --------->DEAR3(1)                                                                                 --------->RRTF1(3)                                                                                 <---------ATERF1(2)                                                                                 --------->RAP2.3(2)                                                                                 --------->RAP2.3(3)                                                                                 --------->RRTF1(2)                                                                                 --------->ATERF1(2)                                                                                 >>>>>>>>>AtERF-4                                                                                 >>>>>>>>>AtERF-2                                                                                --------->DEAR3(2)                                                                                --------->ERF1                                                                                --------->RRTF1(1)                                                                                <------NtERF2                                                                                --------->ATERF1(1)                                                                                --------->RAP2.3(1)                                                                               --------->ZAT2                                                                               <---------RAP2.3(1)                                                                               <---------ATERF1(1)                                                                               --------->ABI4(2)                                                                               ------>NtERF2<--------                                                                               <---------At4g35610                                                                          <---------LBD16<---------GLK1(1)                                                                        ----------->HVH21--------->CCA1(2)                                                                        --------->ANAC46--------->ARR11(3)                                                                 --------->MYB55(2)   ----------->ARR10                                                                 --------->ABI4(2)<---------RAP2.6(3)                                                                 <---------MYB46(3)<------NtERF2                                                                <---------AtMYB61>>>>>>>>>AtERF-1                                                                --------->ALFIN1--------->ORA47(2)     <---------YAB1                                            <---------MYB52(1)>>>>>>>>>AtERF-3    <---------AHL20(2)      ----------->GT1                  <---------DEAR3(1)--------->At4g35610 <-    --------->AHL20(2)   --------->DAG2     <---------MYB46(3)--------->LBD16 --------->ARR14(2)   -- ----->DOF2             ---------->DOF2    <---------ATHB12  --------->LBD16  <---------ARR14(2)  --- ------ZmHOX2a(1)<------ZmHOX2a(1) <---------AHL20(2)       --------->LBD16  --------->ATERF1(1)  --- ---------->GT1 <----------ID1    --------->AHL20(2)        <---------LBD16 <---------ATERF1(1)------   aaggattaaaattggataaggacgaataaagtgtaattttatccaatggttgtgatattctccccggtggttctacgacggagccgccaagatttgcggt  9338300  Previous    Next  AGI:  At1g26930.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At1g26930 [Arabidopsis Thaliana] (GB:Q84M94;GB:Q9ZVG5); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT2G02870.2); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT2G02870.1); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT2G02870.3); similar to kelch repeat-containing F-box family protein, putative [Solanum demissum] (GB:AAT40540.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta p Range:  from: 9336044    to: 9337773    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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