Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->ATHB12                                             <---------WOX13(1)                                           --------->ATHB12                                          <---------YAB1                        --------->AHL20(2)                                   --------->ANAC46 ----------->GT1             <---------AHL20(2) ---->YAB1 <---------ICU4          --------->ANAC58 <------MYB46(1)         ------>ZmHOX2a(1)   ----- --->AHL20(2)                      --------->ANAC58 <------MYB83           --------->TOE2(3)  <------   aaaatgagactgatcaatactcaaaacattctaaaacactcaatctgattgatttggttatacatagccatcaaattcctaaaaaattcaaactcttaac  9316300                                      --------->AtLEC2--------->ANAC46                               --------->ANAC58       --------->ANAC58                              -   --------->HSFB2a(2)      <-------TEIL              --------->ANAC58                    <---------ARR14(2) ---->ZAT6                 --------->CCA1(2)   ------>MYB83              --------->At4g35610       -- -----GT1     <---------ATHB12 --------->ANAC58------>MYB46(1)         --------->YAB1     --------->ARR14(2)   tctatctagacctcaaatcaagactctagatacaagaaccatgtaaaccaaatcacacgaagccaaatcgaaatcagaagacttactccttgaatacgct  9316400                   ------>NtERF2                  <---------TCP16(1)                  <---------PCF5                                   --------->GLK1(1)      --------->ZAT14                  --------->PCF2                                --------->LBD16 ----------->RAV1(1)         <------ZmHOX2a(1)                                      ------>ZmHOX2a(1)  ------->GAMYB   ----------->HVH21--------->ZAT18                           ==============================RAV -------------->AGL15                  <---------TOE2(3)      ----------->RAV1(2) <---------ALFIN1 --------------->AGL3              <----------DOF2       <-----------GT1 --------->MYB46(3)--------->ZAT6   tgccagtaacaggacatttggggccactagctctcttctttgtggtttgatacaccaatttacctcctgaaatcaacaatcccaacacacattacactat  9316500                                                                  >>>>>>>>>TBF1                       --------->YAB1                          >>>>>>>>>TBF1                       <---------ICU4                    --------->ANAC58                      --------->ICU4                     <---------TOE2(3)            --------->ATHB12                             --------->ANAC58            <---------MYB46(3)                      --------->CCA1(2)         ----------->GT1                            --------->GLK1(1)         ---------->DOF2        ------>ZmHOX2a(2)                          --------->ARR11(3)      >>>>>>>>>TBF1       <------ZmHOX2a(2)                     <---------------------WRI1 >>>>>>>>>TBF1               -      <---------ARR14(2)        ---------->DOF2    <---------ARR11(3)>>>>>>>>>TBF1                  <      --------->ARR14(2) <---------YAB1  <------ZmHOX2a(1)   ------------------------>ANAC81        -   gaagaacagatcggtgattagagaattatgagactaaagcagaggagattgaagatatcaaggaagaagaagaagaagaagaaagggacctggagtcttg  9316600                                  <-----------HVH21                                 <-----------RAV1(1)                             <---------At4g35610                             --------->At4g35610                             <---------ZAT2                           <------NtERF2                         <---------REM1(1)                         <---------bZIP60(2)                         <---------ANAC58                         <---------ANAC58                                                       <----          <---------MYB46(3) --------->ZAT2                                            <---------TOE1(3)       <---------ZAT2    <---------ANAC46                                         <----------DOF2       --------->ABI4(2)<------NtERF2                                   ------>NtERF2  <---------TOE2(3)      --------->ALFIN1<---------DEAR3(1)                               --------->DEAR3(1)     <------ --------->CCA1(2)  <------MYB46(1)        ----------->GT1  ----------->RAV1(1) <---------------AGL15 -------->ARR11(1)  <------MYB83 --------->ALFIN1         --------->ZAT14       --------------->AGL15 ---------ARR14(2) <---------AtMYB61    ------>NtERF2     <---------ZAT14       ===================== -------->ARR14(2) --------->MYB111(1)----------->HVH21--------->At4g35610 <----------DOF2    <------   acgatacggtgctggttcgatttggtggcgtagctgtgtcgcgaccggtaaacaagacgctgcaccattttcgcctccttttctcttttagggttttcgt  9316700                                                                                   <---------YAB1                                                                                 --------->YAB1                                                                                 -------->HAHB4                                                                                 <---------ICU4                                                                                --------->ICU4                                                                              --------->YAB1                                                                             <---------AHL20(2)                                                                --------------->AGL15                                                                <---------------AGL15                                             --------->REM1(1)  =====================================                                        --------->ZAT6         <-----------------AGL2 -----MYB52(1)                 --------->TOE1(3)               <-----------------AGL1 ---ANAC58                     --------->TOE2(3)           <----------DOF2   --------->AHL20(2) ===============================================================================MADS_MADS ---ANAC58      *TSS           <---------MYB59            <---------DAG2   <----------DOF2   --------   ttggaacgaagaatataagggtgagactccaaacctaaactaagactacaactatatgggccttttctcattttggtctttaattatgctccagttaaag  9316800                   --------->AHL20(2)              --------->AHL20(2)                     <---------At4g35610              <---------AHL20(2)                     --------->At4g35610           <---------ICU4                       --------->YAB1          --------->AHL20(2)                    <--------HAHB4                            <---------ZAT14          --------->ICU4                       <---------YAB1--------->YAB1         <---------REM1(1)          <---------ATHB12                   --------------->AGL15  <---------ANAC55(2)   --------->ZAT14          <---------AHL20(2)                 ======================================================== ============================================================MADS_MADS           <-----------RAV1(1) -->DOF2  <---------ATHB51    ----------->GT1<---------------AGL15  --------->ANAC55(2)   --------->ZAT18   gcccatgtacaaataattaaaaaaaattcaacttgtaaaaaccaattctattattagctgcaattagaataagtatcgtttgtatgttgtagtgaacaga  9316900                                                                                              <------                                                                                             --------                                                                       <----------DOF2       <-------                                                                       --------->TOE2(3)    ---------                     <---------YAB1                    --------->AHL20(1)                  <---------YAB1            <-----------GT1                            --------->AHL20(2)                <---------ZAT6         <---------ICU4              <---------TOE2(3) <---------AHL20(2)               <---------YAB1        <---------YAB1        <---------------AGL15   --------->AHL20(2)             --------->ICU4        --------->ICU4<---------AHL20(2)          <-------TEIL      <---------ARR11(3)<---------ICU4       --------->TOE2(3)   <---------YAB1  --------->YAB1      --------->ANAC46   <---------AHL20(2) =============================================MADS_MADS<---------AHL20(1)         --------->AHL20(2)   aactagaaacattattaccaatttttattttgattttttaagaaatcatagatgcattaaattatacgtagaactttaaaaagattaattagtattataa  9317000                                      <---------ZAT6                ----------->GT1                                      ----------->GT1               --------->ANAC55(2)                           <---------AHL20(2)                       --------->ANAC55(1)                       --------->AHL20(2)                   <-------TEIL <---------MYB52(1)    <---------AHL20(2)              <---------AHL20(2) ---YAB1              <---------AHL20(2)               --------->AHL20(2)   --------->YAB1 ->AHL20(2)           --------->AHL20(2)          <---------AHL20(1)--------->ANAC58               <- --AHL20(2)           --------->AHL20(1)          <---------AHL20(2)<---------ANAC55(2)            <- >YAB1                <---------AHL20(1)          --------->AHL20(2)--------->ANAC58  <-------TEIL <-   tccgtttagtcaaaacacattcaatttattttatcaaatagtgtaacaacaaaaaatttaaattcatggcacgtaaaaacataatcgatacatttacaag  9317100                                                    <------NtERF2                                                   ------>NtERF2                                                   --------->RAP2.6(2)                                                  <---------DEAR3(1)                                                  --------->ATERF1(2)                                                  <---------RAP2.6(2)                                                  <---------ATERF1(2)                                                  <---------ANAC46                                                 <------NtERF2                                                 --------->RAP2.6(3)                                                <------MYB83           --------->WOX13(1)                   <------MYB46(1)        --------->ANAC58                        <---------ATERF1(1)           <-------TEIL        --------->ANAC58                       --------->MYB111(2)        --------->AHL20(2)        --------->ANAC46                       <---------DEAR3(1)         <---------AHL20(2) <---------DEAR3(1)                           <--------P                  <---------AHL20(1) --------->ALFIN1                          <---------TOE2(3)              --------->AHL20(1) <------NtERF2--------->YAB1            <---------ATHB12                 --------->AHL20(2) --------ANAC46      --------->ANAC46 --------->WOX13(1)                 <---------AHL20(2)     ----- --------ANAC58      --------->ANAC58--------->AHL20(2)            ----------->GT1           -------- --------ANAC58      --------->ANAC58<---------AHL20(2)           ----------->GT1--------->AtLEC2   ggcgtggtgcaagcaattagagcaagccaagtagagaaattaatcaaggttggcggcaaaattgggaattggaaaataaattcatccaaaataacaaatg  9317200  Previous    Next  AGI:  At1g26880.1    Description:  60S ribosomal protein L34 (RPL34A). Identical to 60S ribosomal protein L34-1 (RPL34A) [Arabidopsis Thaliana] (GB:Q42351;GB:Q8L9D3); similar to RPL34 (RIBOSOMAL PROTEIN L34), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G69620.1); similar to unknown [Populus trichocarpa] (GB:ABK92764.1); similar to unknown [Populus trichocarpa] (GB:ABK94411.1); contains InterPro domain Ribosomal protein L34e; (InterPro:IPR008195) Range:  from: 9315370    to: 9316716    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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